Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0260X.Seq
         (315 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    44   7e-04
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    38   0.043
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu...    33   0.93 
UniRef50_UPI0000E486F8 Cluster: PREDICTED: similar to conserved ...    33   1.2  
UniRef50_UPI0000F1F069 Cluster: PREDICTED: hypothetical protein;...    32   2.9  
UniRef50_Q7RAM4 Cluster: Putative uncharacterized protein PY0647...    31   5.0  
UniRef50_A4WN11 Cluster: Putative uncharacterized protein; n=1; ...    31   6.6  
UniRef50_Q559C0 Cluster: Putative uncharacterized protein; n=1; ...    30   8.7  

>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 44.0 bits (99), Expect = 7e-04
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +3

Query: 72  GKCFR*CSSCDDPRISPLTSQYECPQ 149
           GKCFR C S ++ RISPLTS+Y+CPQ
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCPQ 284


>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
          Predicted protein - Nematostella vectensis
          Length = 79

 Score = 37.9 bits (84), Expect = 0.043
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = -1

Query: 63 FHQSRTKVRGSKAIRYRPSSN 1
          F   RTKVRGSK IRYRPSSN
Sbjct: 6  FRCQRTKVRGSKTIRYRPSSN 26


>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
          lucimarinus CCE9901|Rep: Predicted protein -
          Ostreococcus lucimarinus CCE9901
          Length = 72

 Score = 33.5 bits (73), Expect = 0.93
 Identities = 15/21 (71%), Positives = 15/21 (71%)
 Frame = -1

Query: 63 FHQSRTKVRGSKAIRYRPSSN 1
          FH  RTKV GSK IRY PS N
Sbjct: 6  FHCQRTKVGGSKMIRYHPSLN 26


>UniRef50_UPI0000E486F8 Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=2; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to conserved
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 351

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = +1

Query: 103 TIQEFHL*RRNTNAPSYPC*SLPRSSENQQNRTEIIFYYS 222
           T  +F     +T  PS PC S PRSS  ++N T+   YYS
Sbjct: 92  TFDDFKPQLASTPGPSSPCRSSPRSSPRKRNITQTSDYYS 131


>UniRef50_UPI0000F1F069 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 389

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +2

Query: 83  SLMFVLRRSKNFTSNVAIRMPPVIPVNHYLG 175
           S+M V+ RS  FT    IR+PP+  ++H+LG
Sbjct: 20  SVMGVVERSAVFTRQRDIRLPPIPGISHHLG 50


>UniRef50_Q7RAM4 Cluster: Putative uncharacterized protein PY06475;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY06475 - Plasmodium yoelii
           yoelii
          Length = 24

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = -1

Query: 123 EVKFLDRRKTNISESICQRCFH 58
           EVKFLD  +TN  ESIC + FH
Sbjct: 3   EVKFLDFLETNNCESICLKYFH 24


>UniRef50_A4WN11 Cluster: Putative uncharacterized protein; n=1;
           Pyrobaculum arsenaticum DSM 13514|Rep: Putative
           uncharacterized protein - Pyrobaculum arsenaticum
           (strain DSM 13514 / JCM 11321)
          Length = 135

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 16/65 (24%), Positives = 31/65 (47%)
 Frame = +2

Query: 95  VLRRSKNFTSNVAIRMPPVIPVNHYLGVLKTNKIEPRSYSIIPCTKYSSSIFSRFEHSNL 274
           ++RR  N   ++ +    ++  N  L V+K  K +   + +IPC+K    + +     N 
Sbjct: 1   MVRRESNKQLHIVMYRSKLVQ-NRCLIVIKNLKNDKNVFKVIPCSKIKIYLANLLRQKNF 59

Query: 275 FKVKL 289
            K+KL
Sbjct: 60  IKIKL 64


>UniRef50_Q559C0 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1513

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
 Frame = -1

Query: 279 LNKLECSKRLKMLLEY---FVHGIIEYDLGSIL 190
           + KLE   ++K+  EY   F+H I+ YDL SIL
Sbjct: 665 ITKLESKLKIKLTDEYYHLFIHSILTYDLESIL 697


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 294,907,933
Number of Sequences: 1657284
Number of extensions: 4960153
Number of successful extensions: 12095
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12095
length of database: 575,637,011
effective HSP length: 81
effective length of database: 441,397,007
effective search space used: 10152131161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)