Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0258.Seq
(673 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6CQE6 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 86 8e-16
UniRef50_A7SUM0 Cluster: Predicted protein; n=5; Nematostella ve... 81 2e-14
UniRef50_Q99JC0 Cluster: RRNA promoter binding protein; n=28; Eu... 62 9e-09
UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10; Eukaryo... 56 8e-07
UniRef50_Q7TP33 Cluster: Aa1-330; n=1; Rattus norvegicus|Rep: Aa... 55 1e-06
UniRef50_Q6QI74 Cluster: LRRG00134; n=6; Euteleostomi|Rep: LRRG0... 55 1e-06
UniRef50_Q16984 Cluster: Alpha-L1 nicotinic acetyl choline recep... 50 4e-05
UniRef50_Q3U1V2 Cluster: B6-derived CD11 +ve dendritic cells cDN... 45 0.002
UniRef50_Q7QQI2 Cluster: GLP_748_1200_211; n=1; Giardia lamblia ... 34 2.7
UniRef50_A6N073 Cluster: Putative uncharacterized protein; n=1; ... 33 4.8
UniRef50_A3EP86 Cluster: Putative Na+/K+ antiporter; n=1; Leptos... 33 6.3
>UniRef50_Q6CQE6 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=2; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 144
Score = 85.8 bits (203), Expect = 8e-16
Identities = 46/88 (52%), Positives = 54/88 (61%)
Frame = -3
Query: 407 QTRHAPVIRANPYSEVTDPICRLPLPTLFYRLEALHLGDLLRICVRTGATSNVHPSPEFS 228
Q H P++RANPY EVTD CRLPL TLFY+LEA+HLGDLLR+ VR G PS FS
Sbjct: 58 QGPHCPILRANPYPEVTDLFCRLPLSTLFYQLEAVHLGDLLRLSVRPG--MKTIPSCGFS 115
Query: 227 RSAESIMDTAANAVLFAFRTISPFYRIP 144
R+ D A + +T SP IP
Sbjct: 116 RAVAGAPDPAQGLGSSSHKTPSPDKPIP 143
>UniRef50_A7SUM0 Cluster: Predicted protein; n=5; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 123
Score = 81.4 bits (192), Expect = 2e-14
Identities = 40/63 (63%), Positives = 45/63 (71%)
Frame = -3
Query: 392 PVIRANPYSEVTDPICRLPLPTLFYRLEALHLGDLLRICVRTGATSNVHPSPEFSRSAES 213
P +RANP+ EVTD CRLPLPTLFY+ EA HLGDLLR+ VR NV PEFSR+ ES
Sbjct: 63 PTLRANPFPEVTDLFCRLPLPTLFYQPEAAHLGDLLRLLVRPDTKINVF--PEFSRAVES 120
Query: 212 IMD 204
D
Sbjct: 121 APD 123
>UniRef50_Q99JC0 Cluster: RRNA promoter binding protein; n=28;
Euteleostomi|Rep: RRNA promoter binding protein - Rattus
norvegicus (Rat)
Length = 295
Score = 62.5 bits (145), Expect = 9e-09
Identities = 43/114 (37%), Positives = 53/114 (46%)
Frame = -1
Query: 421 IRFPSKPDTPRSSEPILIPKLRIQFADFPYLHYSID*RLFTLETCCGYVYEPERHLTYIP 242
+R P++P P EPILIPKLRI+ ADFPYLH S L P T P
Sbjct: 146 LRAPARPTQPL--EPILIPKLRIRLADFPYLHCSNMPEAVHLGDLLRIWVRPGARFTPSP 203
Query: 241 HLNFQGPQRV*WTPPQMRCSSRSEPYLPSIGFHGIRTLRQKRKLFPDLSAASSG 80
+FQGP R TPP+ R R P G L ++++ P A SG
Sbjct: 204 P-DFQGPARAHRTPPEPRRFPRHGPLSRGEPIPGRPALHKEKRTLPGAPAGFSG 256
>UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10;
Eukaryota|Rep: Cytochrome P450 like_TBP - Nicotiana
tabacum (Common tobacco)
Length = 530
Score = 56.0 bits (129), Expect = 8e-07
Identities = 26/34 (76%), Positives = 27/34 (79%)
Frame = -2
Query: 384 QSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAA 283
QSQS RSYGS LPTSL YI+ STRG SPWRP A
Sbjct: 225 QSQSFSRSYGSILPTSLAYIVPSTRGCSPWRPDA 258
>UniRef50_Q7TP33 Cluster: Aa1-330; n=1; Rattus norvegicus|Rep:
Aa1-330 - Rattus norvegicus (Rat)
Length = 151
Score = 55.2 bits (127), Expect = 1e-06
Identities = 33/85 (38%), Positives = 42/85 (49%)
Frame = -1
Query: 310 RLFTLETCCGYVYEPERHLTYIPHLNFQGPQRV*WTPPQMRCSSRSEPYLPSIGFHGIRT 131
RLFTLETCCGY Y P R L +P + F+G + + + P L + F G
Sbjct: 25 RLFTLETCCGYGYGPARDLHPLPRI-FKGQRELTGRRRNRDAFQGTGPSLGANPFQGALP 83
Query: 130 LRQKRKLFPDLSAASSGHFGLPRRT 56
+KR+L P L AS G LP T
Sbjct: 84 FTKKRELSPGLPPASPGSVALPHWT 108
>UniRef50_Q6QI74 Cluster: LRRG00134; n=6; Euteleostomi|Rep:
LRRG00134 - Rattus norvegicus (Rat)
Length = 221
Score = 55.2 bits (127), Expect = 1e-06
Identities = 33/85 (38%), Positives = 42/85 (49%)
Frame = -1
Query: 310 RLFTLETCCGYVYEPERHLTYIPHLNFQGPQRV*WTPPQMRCSSRSEPYLPSIGFHGIRT 131
RLFTLETCCGY Y P R L +P + F+G + + + P L + F G
Sbjct: 95 RLFTLETCCGYGYGPARDLHPLPRI-FKGQRELTGRRRNRDAFQGTGPSLGANPFQGALP 153
Query: 130 LRQKRKLFPDLSAASSGHFGLPRRT 56
+KR+L P L AS G LP T
Sbjct: 154 FTKKRELSPGLPPASPGSVALPHWT 178
>UniRef50_Q16984 Cluster: Alpha-L1 nicotinic acetyl choline
receptor; n=1; Acheta domesticus|Rep: Alpha-L1 nicotinic
acetyl choline receptor - Acheta domesticus (House
cricket)
Length = 39
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = -3
Query: 365 EVTDPICRLPLPTLFYRLEALHLG 294
EVTDPICRLPLPT YRL+ALHLG
Sbjct: 16 EVTDPICRLPLPTFVYRLDALHLG 39
>UniRef50_Q3U1V2 Cluster: B6-derived CD11 +ve dendritic cells cDNA,
RIKEN full-length enriched library, clone:F730204M12
product:hypothetical protein, full insert sequence; n=3;
Amniota|Rep: B6-derived CD11 +ve dendritic cells cDNA,
RIKEN full-length enriched library, clone:F730204M12
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 136
Score = 44.8 bits (101), Expect = 0.002
Identities = 32/85 (37%), Positives = 40/85 (47%)
Frame = +3
Query: 57 VRRGNPKWPEDAAERSGKSFLFCLSVRIPWNPIEGRYGSEREEHRICGGVHYTLCGP*KF 236
V+ GN P +A G+S LF + R PWN R G + + P K
Sbjct: 47 VQCGNATDPGEAGGSPGESSLFFVKGRAPWNGFAPREGPVPWKASRFRRRPVSSRWPLKI 106
Query: 237 R*GMYVRCRSGSYTYPQQVSKVKSL 311
R G + R+G Y YPQQVSKV SL
Sbjct: 107 R-GRGCKSRAGPYPYPQQVSKVNSL 130
>UniRef50_Q7QQI2 Cluster: GLP_748_1200_211; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_748_1200_211 - Giardia lamblia ATCC
50803
Length = 329
Score = 34.3 bits (75), Expect = 2.7
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -2
Query: 384 QSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAA 283
QS S R YG+ LPTSL+ + RG P PAA
Sbjct: 290 QSHSFSRGYGAGLPTSLSRVRSRARGCWPRSPAA 323
>UniRef50_A6N073 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 39
Score = 33.5 bits (73), Expect = 4.8
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3
Query: 318 IE*CR*GKSANWIRNFGIRIGSD 386
+E CR GKSA IRNFG RIGS+
Sbjct: 1 MEQCRQGKSAKRIRNFGKRIGSE 23
>UniRef50_A3EP86 Cluster: Putative Na+/K+ antiporter; n=1;
Leptospirillum sp. Group II UBA|Rep: Putative Na+/K+
antiporter - Leptospirillum sp. Group II UBA
Length = 406
Score = 33.1 bits (72), Expect = 6.3
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 323 FYRLEALHLGDLLRICVRTGAT-SNVHPSPEFSRSAESIMDTAANAVLFAFRTI 165
F ++ HL +L CV TG T N HP P FSR A M + V F ++
Sbjct: 227 FTLADSFHLSGILA-CVVTGITIGNSHPFPGFSREARESMLSLWETVAFIINSV 279
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,904,663
Number of Sequences: 1657284
Number of extensions: 15004659
Number of successful extensions: 42899
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 41293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42890
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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