Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0252.Seq
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.0  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    23   2.4  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   4.1  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   4.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.5  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   7.2  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
 Frame = -3

Query: 165 LVSHTIFVTNYMKLTYC---NFTKFNN 94
           L+  ++FVT Y+   YC      +FNN
Sbjct: 492 LIVRSVFVTTYLMFDYCTVLRVQRFNN 518


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +3

Query: 177 VCTCAPLITPQYNNTYSE 230
           VC C  +++ +Y N Y++
Sbjct: 9   VCACTNVLSEEYTNQYND 26


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -1

Query: 98  IILVTN*FFLSIIFCTDFLIGTDKTENK 15
           +IL+T    + ++ C +F+    K+EN+
Sbjct: 243 LILITGKSIVQLLTCLNFITNNLKSENE 270


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -1

Query: 98  IILVTN*FFLSIIFCTDFLIGTDKTENK 15
           +IL+T    + ++ C +F+    K+EN+
Sbjct: 243 LILITGKSIVQLLTCLNFITNNLKSENE 270


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/27 (25%), Positives = 17/27 (62%)
 Frame = -1

Query: 113 ISLSLIILVTN*FFLSIIFCTDFLIGT 33
           + L L++ +   +++ ++FC  F+I T
Sbjct: 250 VHLLLLVCIYYFYYMHLLFCCAFIIFT 276


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 147 KSCVKLVA*GVCTCAPLITPQYNNTYS 227
           K  V+ V     + +PL+TP +N  YS
Sbjct: 2   KGFVRQVKQEADSTSPLLTPPHNPAYS 28


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,356
Number of Sequences: 336
Number of extensions: 3431
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)