Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0247.Seq
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    24   1.0  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    24   1.0  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   1.8  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   2.4  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   3.2  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   3.2  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.4  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   9.8  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = -3

Query: 544 TLMKCSFKFLKHSYLLMNLIFIVVSGTPYSFYKEVLSGVT 425
           T+MK    F   S+  + ++ ++ SGT +    + L  +T
Sbjct: 67  TIMKFVLSFRTGSFTFLMVVAVLSSGTTFKLVAKTLENMT 106


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = -3

Query: 544 TLMKCSFKFLKHSYLLMNLIFIVVSGTPYSFYKEVLSGVT 425
           T+MK    F   S+  + ++ ++ SGT +    + L  +T
Sbjct: 67  TIMKFVLSFRTGSFTFLMVVAVLSSGTTFKLVAKTLENMT 106


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
 Frame = -2

Query: 518 FKTFLFTYELNFYCCIGNAVFILQRSAFWGYS*-CVHV*IS-------PLILPTFLFAGS 363
           F   L ++   FY   G  + +   +  +GY   CV   +S       PL++P  LF G 
Sbjct: 515 FMIGLNSHGFRFYIACGIMILVANVAISFGYLISCVSRSVSMALSIGPPLVIPFLLFGGF 574

Query: 362 TLSCSTVHYFLSF 324
            L+ S++  +  +
Sbjct: 575 FLNVSSIPIYFKW 587


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 100 LLASLFVRCFSSMNLFDRLFSFG 32
           ++ S+F+ C+S   +FD L  FG
Sbjct: 255 VIVSVFILCWSPYIIFDLLQVFG 277


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 643 RIMGSWAPQYKNSCDRSINT 584
           RIMG   P + N C+++ +T
Sbjct: 198 RIMGVHRPGFDNDCNKNTST 217


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -2

Query: 398 PLILPTFLFAGSTLSCSTVHYFLSF 324
           PL++P  LF G  L+ S++  +  +
Sbjct: 563 PLVIPFLLFGGFFLNVSSIPIYFKW 587


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 515 KTFLFTYELNFYC 477
           K+ + TYE+ +YC
Sbjct: 283 KSLVLTYEMRWYC 295


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +1

Query: 52  QTNSSTKNNEQTTMPTKSISTQEQTKTSKKGKGIYKNTSTDS 177
           Q   + + + + +   K+ S    TKTS     I  NTST S
Sbjct: 128 QKQHNQQQSVEKSSKLKNKSAPILTKTSPTPVSINNNTSTSS 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,739
Number of Sequences: 336
Number of extensions: 3023
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)