Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0247.Seq
         (705 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    25   0.92 
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    25   0.92 
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    25   0.92 
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    23   2.1  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   2.1  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    23   2.1  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    22   6.5  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    22   6.5  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   6.5  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 178 TSPWMYFYIYLCLSSTFSF 122
           T+PW Y+YIY  L +  S+
Sbjct: 169 TTPWDYYYIYHTLVAEQSY 187


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 178 TSPWMYFYIYLCLSSTFSF 122
           T+PW Y+YIY  L +  S+
Sbjct: 184 TTPWDYYYIYHTLVAEQSY 202


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 178 TSPWMYFYIYLCLSSTFSF 122
           T+PW Y+YIY  L +  S+
Sbjct: 72  TTPWDYYYIYHTLVAEQSY 90


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 651 CYFELWVLG 625
           CY+E WVLG
Sbjct: 113 CYYETWVLG 121


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +1

Query: 25  TKNQTKIDDQTNSSTKNNEQTTMPTKSISTQE 120
           T NQ+  DD ++  + ++   TM T  ++  E
Sbjct: 214 TSNQSDTDDHSSVQSSSDSGVTMSTSRLTLSE 245


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 651 CYFELWVLG 625
           CY+E WVLG
Sbjct: 79  CYYETWVLG 87


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 179 NESVDVFLYIPLPFFDVFVC 120
           N+ V VF    +P F  F+C
Sbjct: 149 NKVVSVFYTAVIPMFSPFIC 168


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +1

Query: 118 EQTKTSKKGKGIYKNTSTDSFGIQEEDKVKSPEEEALSAFVYPE 249
           E++K+   G     NTS  S  +   DK++S ++  +S F  PE
Sbjct: 78  ERSKSRSPGSRDRSNTSNTSKTVILSDKLESSDD--ISLFRGPE 119


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 55  TNSSTKNNEQTTMPTKSISTQEQTKTSKKGKGI 153
           T  +TKN  +T +    I   EQ    K+ KG+
Sbjct: 226 TRHNTKNGMKTLLSETDIWEVEQILAKKEIKGV 258


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,944
Number of Sequences: 438
Number of extensions: 4105
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)