Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0244.Seq
(744 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 54 2e-09
AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esteras... 24 1.5
AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esteras... 23 3.4
AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esteras... 23 3.4
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 23 3.4
AY873916-1|AAW67572.1| 377|Tribolium castaneum chitinase 6 prot... 22 6.0
AY769607-1|AAV40983.1| 196|Tribolium castaneum heat shock cogna... 21 7.9
AY769606-1|AAV40982.1| 196|Tribolium castaneum heat shock prote... 21 7.9
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 21 7.9
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 7.9
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 7.9
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 7.9
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 53.6 bits (123), Expect = 2e-09
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHI--NNQPPIRRGD--GPIALVLAPTRELAQQIQQVAADFGHT 682
+QTGSGKT A++LP I ++ + PP + P+ ++++PTRELA QI F +
Sbjct: 202 AQTGSGKTAAFMLPIIHNLLSDKNPPNTENNCAQPVVVIMSPTRELAIQIADQGKKFAYN 261
Query: 683 SYVRNTCVFGGAPKREQ 733
S V+ ++GG Q
Sbjct: 262 STVKVAVIYGGTSTNHQ 278
Score = 43.6 bits (98), Expect = 2e-06
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +1
Query: 346 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 513
EV V+G + PI FE + ++ + VK GY +PT IQ P+ +SG++L++
Sbjct: 145 EVKVTGNDAPPPITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMS 200
>AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 1 VDPASERIHSLNKHLQLNPKN 63
VDP SER+ + L++NP N
Sbjct: 511 VDPDSERMAFWQRILKINPNN 531
>AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 1 VDPASERIHSLNKHLQLNPKN 63
VDP S+R+ + L++NP N
Sbjct: 511 VDPDSDRMAFWQRILKINPNN 531
>AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 1 VDPASERIHSLNKHLQLNPKN 63
VDP S+R+ + L++NP N
Sbjct: 511 VDPDSDRMAFWQRILKINPNN 531
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 581 VGYLCAQWLARCRPTFCRN 525
+GY+C + CRP C N
Sbjct: 253 LGYICEINVDDCRPGACHN 271
>AY873916-1|AAW67572.1| 377|Tribolium castaneum chitinase 6
protein.
Length = 377
Score = 21.8 bits (44), Expect = 6.0
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 150 GLATVAIDLEDLEALVGKKNSLEGRTCDA 236
G+ +I+ +DL A G KN+L DA
Sbjct: 345 GVMIWSIETDDLHATCGTKNALLHAVNDA 373
>AY769607-1|AAV40983.1| 196|Tribolium castaneum heat shock cognate
70 protein.
Length = 196
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/53 (18%), Positives = 23/53 (43%)
Frame = -3
Query: 196 TKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDYFSDLVEDV 38
T+ R+ +++++ + I + TT++ A DYF ++ V
Sbjct: 93 TQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPV 145
>AY769606-1|AAV40982.1| 196|Tribolium castaneum heat shock protein
70 protein.
Length = 196
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/53 (18%), Positives = 23/53 (43%)
Frame = -3
Query: 196 TKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDYFSDLVEDV 38
T+ R+ +++++ + I + TT++ A DYF ++ V
Sbjct: 93 TQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPV 145
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2
Query: 272 LLKGWSKQNPNLGVACSALQRI 207
LL + K+N LG AC + I
Sbjct: 173 LLVDYMKKNKTLGAACGRIHPI 194
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2
Query: 272 LLKGWSKQNPNLGVACSALQRI 207
LL + K+N LG AC + I
Sbjct: 487 LLVDYMKKNKTLGAACGRIHPI 508
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2
Query: 272 LLKGWSKQNPNLGVACSALQRI 207
LL + K+N LG AC + I
Sbjct: 720 LLVDYMKKNKTLGAACGRIHPI 741
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2
Query: 272 LLKGWSKQNPNLGVACSALQRI 207
LL + K+N LG AC + I
Sbjct: 720 LLVDYMKKNKTLGAACGRIHPI 741
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,728
Number of Sequences: 336
Number of extensions: 4147
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -