Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0244.Seq
(744 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 90 2e-18
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 67 1e-11
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 6e-10
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 59 4e-09
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 57 1e-08
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 50 2e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 49 5e-06
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 48 6e-06
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 48 8e-06
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 44 1e-04
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 43 2e-04
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 42 5e-04
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 39 0.005
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 39 0.005
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 38 0.007
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 37 0.020
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 36 0.026
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 33 0.18
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 33 0.24
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 30 1.7
SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 29 4.0
SB_23248| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 28 9.2
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 90.2 bits (214), Expect = 2e-18
Identities = 40/66 (60%), Positives = 51/66 (77%)
Frame = +2
Query: 545 YILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 724
+ILP IVHIN+QP ++ GDGPI LVL PTRELAQQ+Q+VA G +R+TC++GGAPK
Sbjct: 113 FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPK 172
Query: 725 REQARD 742
Q R+
Sbjct: 173 GPQIRE 178
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = +1
Query: 307 RSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 474
R +EV+ YR ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 83.4 bits (197), Expect = 2e-16
Identities = 39/75 (52%), Positives = 51/75 (68%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 694
++TGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI A FG +
Sbjct: 561 AKTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIH 620
Query: 695 NTCVFGGAPKREQAR 739
VFGG K EQ++
Sbjct: 621 VVAVFGGGNKYEQSK 635
Score = 74.9 bits (176), Expect = 6e-14
Identities = 31/84 (36%), Positives = 50/84 (59%)
Frame = +1
Query: 259 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 438
+PFNKNFY+ HP + K+S E+++ R K + VSG P F F + + ++
Sbjct: 475 KPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDEQMMASIRK 534
Query: 439 MGYKEPTPIQAQGWPIAMSGKNLV 510
+ Y +PT IQ Q PIA+SG++++
Sbjct: 535 LEYTQPTQIQCQALPIALSGRDII 558
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFGHT 682
++TGSGKT A+ +P +V I P I R + GP AL+LAPTRELAQQI++ FG
Sbjct: 145 AETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRP 204
Query: 683 SYVRNTCVFGGAPK 724
+R V GGA +
Sbjct: 205 LGIRTVSVIGGADR 218
Score = 50.8 bits (116), Expect = 1e-06
Identities = 20/60 (33%), Positives = 36/60 (60%)
Frame = +1
Query: 331 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 510
+R ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + ++++
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 61.7 bits (143), Expect = 6e-10
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +1
Query: 259 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 435
QPF K+FY P + K +P E +E+R E + V G P++ + + + +K
Sbjct: 62 QPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILDVLK 121
Query: 436 TMGYKEPTPIQAQGWPIAMSGKNLVA 513
Y++PTPIQAQ P+ MSG++++A
Sbjct: 122 KNSYEKPTPIQAQAIPVIMSGRDMIA 147
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/67 (37%), Positives = 33/67 (49%)
Frame = +2
Query: 533 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFG 712
K +Y P + P I G IA+V+ PTRELA QI + F + +R CV+G
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYG 180
Query: 713 GAPKREQ 733
G EQ
Sbjct: 181 GTGISEQ 187
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 58.8 bits (136), Expect = 4e-09
Identities = 25/77 (32%), Positives = 45/77 (58%)
Frame = +1
Query: 280 YDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 459
Y HPT+ + +V++ R+K E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 460 PIQAQGWPIAMSGKNLV 510
PIQ Q P+ +SG++++
Sbjct: 221 PIQMQVLPVLLSGRDVM 237
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 652
++TGSGKTLAY LP + + + P GD P+AL+L PTREL QQ+
Sbjct: 116 AETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 161
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/82 (29%), Positives = 43/82 (52%)
Frame = +1
Query: 265 FNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 444
F ++YD + V + S V+E R K+ + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 445 YKEPTPIQAQGWPIAMSGKNLV 510
++ PTPIQ Q MSG++++
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDII 113
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 53.6 bits (123), Expect = 2e-07
Identities = 30/74 (40%), Positives = 41/74 (55%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 694
+QTGSGKT AY+LP + + Q P+AL +APTRELA+QI A F + ++
Sbjct: 523 AQTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIK 582
Query: 695 NTCVFGGAPKREQA 736
+GG QA
Sbjct: 583 VCVCYGGVSVPYQA 596
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 355 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 513
VSG I F E F + + + GY+ PTP+Q PI M+G++L+A
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMA 521
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINN----QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT 682
+QTGSGKT A++LP + + N P A+ +APTRELA QI A F H
Sbjct: 755 AQTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHG 814
Query: 683 SYVRNTCVFGGAPKREQAR 739
+ +R +GG Q R
Sbjct: 815 TMLRPVVCYGGVSVSHQLR 833
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +1
Query: 325 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 504
E+Y ++ EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++
Sbjct: 692 EKY-DQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRD 750
Query: 505 LVA 513
++A
Sbjct: 751 VMA 753
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 51.2 bits (117), Expect = 9e-07
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +2
Query: 512 RSQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADFGHTSY 688
++Q+G+GKT + + + I+ + G D ALVLAPTRELAQQIQ+V G +
Sbjct: 128 QAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGDYMH 187
Query: 689 VRNTCVFGGAPKRE 730
V+ GG RE
Sbjct: 188 VKCHACIGGTNVRE 201
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 50.4 bits (115), Expect = 2e-06
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +2
Query: 512 RSQTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 688
+++TG+GKTL++ LP + + + + +RG P LV+APTRELA+Q+ + S
Sbjct: 116 QARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQVGNEFENL--KSN 173
Query: 689 VRNTCVFGGAPKREQ 733
+ C++GG P Q
Sbjct: 174 LEVYCIYGGMPYEPQ 188
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = +1
Query: 319 EVEEYRNKHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 486
++ +R++ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 487 AMSG 498
G
Sbjct: 197 MAHG 200
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 545 YILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQI 652
Y P + + P + G G A+V++PTRELAQQI
Sbjct: 183 YTTPTPIQMQATPLMAHGPKKSGFRAVVVSPTRELAQQI 221
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 48.4 bits (110), Expect = 6e-06
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 694
++TGSGKTLA+++P I + Q DG ALV++PTRELA Q +V G+ +
Sbjct: 94 AKTGSGKTLAFLIPIIETLWRQKWTSM-DGLGALVISPTRELAYQTFEVLVKIGNKHDLS 152
Query: 695 NTCVFGGAP-KREQAR 739
+ GG K EQ R
Sbjct: 153 AGLIIGGKDLKNEQKR 168
Score = 31.9 bits (69), Expect = 0.56
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +1
Query: 382 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 510
++ F + G+ G+ PT IQ QG P+A+SG++++
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVL 91
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 48.0 bits (109), Expect = 8e-06
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQIQQVAADFGH 679
+QTGSGKTLAY+ P +VH + R G P A ++ P RELA QI + A H
Sbjct: 422 AQTGSGKTLAYLAP-LVHRLREDEERHGILARLKRPRACIVVPARELATQILKTAKSLCH 480
Query: 680 TSYVRNTCVFGGAPKREQARD 742
+ R+ + GG K++ RD
Sbjct: 481 HARFRSVGLIGGR-KQKWMRD 500
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/67 (34%), Positives = 39/67 (58%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 694
++TGSGKT A+++P + G AL+L+PTRELA Q Q+ + G + ++
Sbjct: 325 ARTGSGKTAAFLIPMFEKLQTHTA---KVGIRALILSPTRELALQTQKFIKELGRFTGLK 381
Query: 695 NTCVFGG 715
++ + GG
Sbjct: 382 SSVILGG 388
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +1
Query: 325 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 504
E+Y ++ EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++
Sbjct: 115 EKY-DQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRD 173
Query: 505 LVA 513
++A
Sbjct: 174 VMA 176
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/76 (38%), Positives = 41/76 (53%)
Frame = +2
Query: 512 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 691
++Q+G+GKT + + + I+ Q +R P ALVL+PTRELA QIQ+V G V
Sbjct: 40 QAQSGTGKTATFSISVLQAIDTQ--LRE---PQALVLSPTRELANQIQKVVLALGDYMSV 94
Query: 692 RNTCVFGGAPKREQAR 739
+ GG E R
Sbjct: 95 QCHACIGGTNIGEDIR 110
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/74 (31%), Positives = 42/74 (56%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 694
++TGSGKTLA+++P +V + + + +G ++++PTREL+ Q VA D
Sbjct: 616 AKTGSGKTLAFLVP-VVELLYKLQFKTRNGTGVIIISPTRELSLQTYGVARDLLKHHNFT 674
Query: 695 NTCVFGGAPKREQA 736
+ GG ++ +A
Sbjct: 675 YGIIMGGVNRKAEA 688
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/74 (36%), Positives = 38/74 (51%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 694
++TGSGKT A+ LP + + + P G A+VL PTRELA QI G ++
Sbjct: 51 AKTGSGKTAAFALPILQKLCDDPY-----GIFAVVLTPTRELAFQIADQFKVLGRPIGLK 105
Query: 695 NTCVFGGAPKREQA 736
+ GG +QA
Sbjct: 106 EAVIVGGLDMMKQA 119
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 41.9 bits (94), Expect = 5e-04
Identities = 27/74 (36%), Positives = 37/74 (50%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 694
++TGSGKT A+ LP + + + P AL+L PTRELA QI + G V+
Sbjct: 8 AETGSGKTGAFALPILQALLDNP-----QRLFALILTPTRELAFQISEQCEALGSGIGVK 62
Query: 695 NTCVFGGAPKREQA 736
+ GG QA
Sbjct: 63 CAVIVGGIDMMSQA 76
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 41.5 bits (93), Expect = 7e-04
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 16/89 (17%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHIN-------NQPPI-------RRGDGPIALVLAPTRELAQQI 652
++TGSGKTLA+ +P I HI Q P +G +AL++APTRELA Q+
Sbjct: 175 AETGSGKTLAFGIPIIQHIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQV 234
Query: 653 QQVAADFGHTSYVRNTCVFGG--APKREQ 733
+ + V+ + GG APK+++
Sbjct: 235 KDHLVKAAKYTSVKVAAIVGGMAAPKQQR 263
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +2
Query: 512 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 676
R++ G+GKT AY++P + + + ALVL PTRELA Q Q+ + G
Sbjct: 90 RAKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
Score = 32.3 bits (70), Expect = 0.43
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 513
FE+ + G+ G+ +P+PIQ + P+A++G++++A
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILA 89
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +2
Query: 512 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 676
R++ G+GKT AY++P + + + ALVL PTRELA Q Q+ + G
Sbjct: 90 RAKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
Score = 32.3 bits (70), Expect = 0.43
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 513
FE+ + G+ G+ +P+PIQ + P+A++G++++A
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILA 89
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 38.3 bits (85), Expect = 0.007
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Frame = +2
Query: 512 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSY 688
+SQ+G+GKT A++L + ++ P P + L+PT ELA+Q +VA G H +
Sbjct: 148 QSQSGTGKTAAFVLTMLSRVDATKPY-----PQVICLSPTYELARQTGKVAEAMGKHCPH 202
Query: 689 VR-NTCVFGGA-PKREQARD 742
++ N V G P+ ++ D
Sbjct: 203 IKINYAVRGNQFPRGQKCTD 222
Score = 31.1 bits (67), Expect = 0.99
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +1
Query: 340 KHEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 495
KHEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++
Sbjct: 85 KHEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLA 139
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 36.7 bits (81), Expect = 0.020
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +2
Query: 512 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA-QQIQQVAADFGHTSY 688
+S+TG+GK+L ++LP++ Q P RG G I ++ PTRELA Q + +V+ G S
Sbjct: 203 KSETGTGKSLVFLLPSV-----QDP-GRGYGTI--IVVPTRELASQMLYEVSRLLGDKSI 254
Query: 689 V 691
V
Sbjct: 255 V 255
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 36.3 bits (80), Expect = 0.026
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = +2
Query: 605 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 739
P ALVL+PTRELA QIQ+V G V+ GG E R
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIR 48
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 382 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 513
I FE+ + + + V GYK+PTP+Q PI ++L+A
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMA 917
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 515 SQTGSGKTLAYILPAIVHINNQPP 586
+QTGSGKT A+++P + I + P
Sbjct: 919 AQTGSGKTAAFLIPILSRIYMEGP 942
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 33.5 bits (73), Expect = 0.18
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +2
Query: 524 GSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAAD-FGHTSYV 691
GSGK LAY+LP I I + +GP+ L+L + ++ V D +
Sbjct: 234 GSGKRLAYLLPIIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCEDLIRNRRRT 293
Query: 692 RNTCVFGGAPKREQ 733
R +FGG + ++
Sbjct: 294 RVQMIFGGGAEEDR 307
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 33.1 bits (72), Expect = 0.24
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +2
Query: 521 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 649
TG+GKT A++LP + + +P + LV+ PTRELA Q
Sbjct: 56 TGTGKTAAFMLPILERLLYRP--TQSPAIRVLVITPTRELAIQ 96
Score = 32.7 bits (71), Expect = 0.32
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 424 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 513
+ V +G+ PTPIQA P+A+ GK++ A
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCA 52
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +1
Query: 367 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 480
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 313 PYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 444
P+E + + KH++ V+ VE + +Q +E F + ++Q VK G
Sbjct: 252 PFEPPKPKTKHKLDVATVEDYKKLQEYEREKFTEMIKQ-VKDTG 294
>SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 734
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -2
Query: 197 HQSLQILQIYCHRCQTETNYRRICCLLQIWNHRFHGY 87
H L YC RC T CCLLQ++++ ++G+
Sbjct: 484 HLQQPSLAAYC-RCITILTTAIACCLLQVYHNTYNGH 519
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 325 EEYRNK-HEVTVSGVEVHNPIQYFEEANFPDY 417
EE NK H++ + + +HNP YFE+ + DY
Sbjct: 234 EEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_23248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 29
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -3
Query: 262 VGVNRIPIWASHVLPSREF 206
VGV I WAS++LPSR+F
Sbjct: 10 VGVRDIEQWASNLLPSRQF 28
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = +2
Query: 512 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 676
++++G+GKT + + A+ ++ I + ++L PTRE+A Q++ V G
Sbjct: 56 QAKSGTGKTCVFSVIALENV-----ITESNCIQIIILTPTREIAVQVKDVICAIG 105
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,045,939
Number of Sequences: 59808
Number of extensions: 500144
Number of successful extensions: 1315
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1300
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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