Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0240.Seq
(704 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 157 7e-39
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 157 7e-39
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 157 7e-39
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 157 7e-39
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 153 8e-38
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 153 8e-38
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 146 2e-35
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 83 1e-16
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 83 1e-16
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 83 2e-16
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 83 2e-16
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 82 3e-16
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 82 3e-16
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 82 3e-16
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 82 3e-16
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 82 4e-16
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 57 1e-08
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 57 1e-08
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 36 0.035
At1g01190.1 68414.m00032 cytochrome P450, putative similar to cy... 31 0.74
At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 1.3
At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identica... 30 1.7
At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 30 1.7
At5g61460.1 68418.m07712 structural maintenance of chromosomes (... 29 4.0
At2g15020.1 68415.m01710 expressed protein and genefinder 28 5.2
At1g68080.1 68414.m07777 expressed protein 28 5.2
At1g62870.1 68414.m07099 expressed protein 28 5.2
At1g61140.1 68414.m06888 SNF2 domain-containing protein / helica... 28 5.2
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 28 6.9
At3g01770.1 68416.m00116 DNA-binding bromodomain-containing prot... 27 9.2
At1g21090.1 68414.m02638 hydroxyproline-rich glycoprotein family... 27 9.2
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 157 bits (381), Expect = 7e-39
Identities = 70/83 (84%), Positives = 78/83 (93%)
Frame = +3
Query: 258 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 437
Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAEKA+HEQLSVAEIT
Sbjct: 233 QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEIT 292
Query: 438 NACFEPANQMVKCDPRHGKYMAC 506
N+ FEPA+ M KCDPRHGKYMAC
Sbjct: 293 NSAFEPASMMAKCDPRHGKYMAC 315
Score = 140 bits (340), Expect = 6e-34
Identities = 62/82 (75%), Positives = 75/82 (91%)
Frame = +1
Query: 1 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 180
SG SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DN
Sbjct: 147 SGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDN 206
Query: 181 EAIYDICRRNLDIERPTYTNLN 246
EAIYDICRR+L+IERPTYTNLN
Sbjct: 207 EAIYDICRRSLNIERPTYTNLN 228
Score = 134 bits (324), Expect = 5e-32
Identities = 58/65 (89%), Positives = 63/65 (96%)
Frame = +2
Query: 509 MLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVC 688
++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVC
Sbjct: 317 LMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC 376
Query: 689 MLSNT 703
M+SN+
Sbjct: 377 MISNS 381
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 157 bits (381), Expect = 7e-39
Identities = 70/83 (84%), Positives = 78/83 (93%)
Frame = +3
Query: 258 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 437
Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAEKA+HEQLSVAEIT
Sbjct: 233 QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEIT 292
Query: 438 NACFEPANQMVKCDPRHGKYMAC 506
N+ FEPA+ M KCDPRHGKYMAC
Sbjct: 293 NSAFEPASMMAKCDPRHGKYMAC 315
Score = 140 bits (340), Expect = 6e-34
Identities = 62/82 (75%), Positives = 75/82 (91%)
Frame = +1
Query: 1 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 180
SG SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DN
Sbjct: 147 SGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDN 206
Query: 181 EAIYDICRRNLDIERPTYTNLN 246
EAIYDICRR+L+IERPTYTNLN
Sbjct: 207 EAIYDICRRSLNIERPTYTNLN 228
Score = 134 bits (324), Expect = 5e-32
Identities = 58/65 (89%), Positives = 63/65 (96%)
Frame = +2
Query: 509 MLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVC 688
++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVC
Sbjct: 317 LMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC 376
Query: 689 MLSNT 703
M+SN+
Sbjct: 377 MISNS 381
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 157 bits (381), Expect = 7e-39
Identities = 70/83 (84%), Positives = 78/83 (93%)
Frame = +3
Query: 258 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 437
Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAEKA+HEQLSVAEIT
Sbjct: 233 QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEIT 292
Query: 438 NACFEPANQMVKCDPRHGKYMAC 506
N+ FEPA+ M KCDPRHGKYMAC
Sbjct: 293 NSAFEPASMMAKCDPRHGKYMAC 315
Score = 140 bits (339), Expect = 8e-34
Identities = 62/82 (75%), Positives = 74/82 (90%)
Frame = +1
Query: 1 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 180
SG SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DN
Sbjct: 147 SGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDN 206
Query: 181 EAIYDICRRNLDIERPTYTNLN 246
EAIYDICRR+L IERPTYTNLN
Sbjct: 207 EAIYDICRRSLSIERPTYTNLN 228
Score = 134 bits (324), Expect = 5e-32
Identities = 58/65 (89%), Positives = 63/65 (96%)
Frame = +2
Query: 509 MLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVC 688
++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVC
Sbjct: 317 LMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC 376
Query: 689 MLSNT 703
M+SN+
Sbjct: 377 MISNS 381
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 157 bits (381), Expect = 7e-39
Identities = 70/83 (84%), Positives = 78/83 (93%)
Frame = +3
Query: 258 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 437
Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAEKA+HEQLSVAEIT
Sbjct: 233 QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEIT 292
Query: 438 NACFEPANQMVKCDPRHGKYMAC 506
N+ FEPA+ M KCDPRHGKYMAC
Sbjct: 293 NSAFEPASMMAKCDPRHGKYMAC 315
Score = 140 bits (339), Expect = 8e-34
Identities = 62/82 (75%), Positives = 74/82 (90%)
Frame = +1
Query: 1 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 180
SG SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DN
Sbjct: 147 SGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDN 206
Query: 181 EAIYDICRRNLDIERPTYTNLN 246
EAIYDICRR+L IERPTYTNLN
Sbjct: 207 EAIYDICRRSLSIERPTYTNLN 228
Score = 134 bits (324), Expect = 5e-32
Identities = 58/65 (89%), Positives = 63/65 (96%)
Frame = +2
Query: 509 MLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVC 688
++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVC
Sbjct: 317 LMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC 376
Query: 689 MLSNT 703
M+SN+
Sbjct: 377 MISNS 381
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 153 bits (372), Expect = 8e-38
Identities = 69/83 (83%), Positives = 75/83 (90%)
Frame = +3
Query: 258 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 437
QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVISA KAYHEQLSV EIT
Sbjct: 233 QIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEIT 292
Query: 438 NACFEPANQMVKCDPRHGKYMAC 506
NA FEPA+ M KCDPRHGKYMAC
Sbjct: 293 NAVFEPASMMAKCDPRHGKYMAC 315
Score = 145 bits (351), Expect = 3e-35
Identities = 66/82 (80%), Positives = 75/82 (91%)
Frame = +1
Query: 1 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 180
SG SLL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DN
Sbjct: 147 SGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDN 206
Query: 181 EAIYDICRRNLDIERPTYTNLN 246
EAIYDICRR+LDIERPTYTNLN
Sbjct: 207 EAIYDICRRSLDIERPTYTNLN 228
Score = 133 bits (322), Expect = 9e-32
Identities = 57/64 (89%), Positives = 62/64 (96%)
Frame = +2
Query: 509 MLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVC 688
++YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVC
Sbjct: 317 LMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC 376
Query: 689 MLSN 700
M+SN
Sbjct: 377 MISN 380
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 153 bits (372), Expect = 8e-38
Identities = 69/83 (83%), Positives = 75/83 (90%)
Frame = +3
Query: 258 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 437
QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVISA KAYHEQLSV EIT
Sbjct: 233 QIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEIT 292
Query: 438 NACFEPANQMVKCDPRHGKYMAC 506
NA FEPA+ M KCDPRHGKYMAC
Sbjct: 293 NAVFEPASMMAKCDPRHGKYMAC 315
Score = 145 bits (351), Expect = 3e-35
Identities = 66/82 (80%), Positives = 75/82 (91%)
Frame = +1
Query: 1 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 180
SG SLL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DN
Sbjct: 147 SGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDN 206
Query: 181 EAIYDICRRNLDIERPTYTNLN 246
EAIYDICRR+LDIERPTYTNLN
Sbjct: 207 EAIYDICRRSLDIERPTYTNLN 228
Score = 133 bits (322), Expect = 9e-32
Identities = 57/64 (89%), Positives = 62/64 (96%)
Frame = +2
Query: 509 MLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVC 688
++YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVC
Sbjct: 317 LMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVC 376
Query: 689 MLSN 700
M+SN
Sbjct: 377 MISN 380
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 146 bits (353), Expect = 2e-35
Identities = 64/83 (77%), Positives = 72/83 (86%)
Frame = +3
Query: 258 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 437
Q +SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVIS+ KAYHEQ SV EIT
Sbjct: 233 QTISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEIT 292
Query: 438 NACFEPANQMVKCDPRHGKYMAC 506
+ FEP+N M KCDPRHGKYMAC
Sbjct: 293 TSVFEPSNMMAKCDPRHGKYMAC 315
Score = 140 bits (339), Expect = 8e-34
Identities = 63/82 (76%), Positives = 74/82 (90%)
Frame = +1
Query: 1 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 180
SG SLL+ERLSVD+GKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D ++DN
Sbjct: 147 SGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDN 206
Query: 181 EAIYDICRRNLDIERPTYTNLN 246
EAIYDICRR+LDIERPTY+NLN
Sbjct: 207 EAIYDICRRSLDIERPTYSNLN 228
Score = 128 bits (309), Expect = 4e-30
Identities = 55/64 (85%), Positives = 60/64 (93%)
Frame = +2
Query: 509 MLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVC 688
++YRGDVVPKDVN A+A IK KRTIQFVDWCPTGFK GINYQPP+VVPGGDLAKVQRAVC
Sbjct: 317 LMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVC 376
Query: 689 MLSN 700
M+SN
Sbjct: 377 MISN 380
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 83.4 bits (197), Expect = 1e-16
Identities = 34/82 (41%), Positives = 57/82 (69%)
Frame = +1
Query: 1 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 180
SG +LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DN
Sbjct: 145 SGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 204
Query: 181 EAIYDICRRNLDIERPTYTNLN 246
EA+YDIC R L + PT+ +LN
Sbjct: 205 EALYDICFRTLKLANPTFGDLN 226
Score = 79.4 bits (187), Expect = 2e-15
Identities = 34/79 (43%), Positives = 49/79 (62%)
Frame = +3
Query: 264 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 443
+S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + LSV E+T
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQ 292
Query: 444 CFEPANQMVKCDPRHGKYM 500
++ N M DPRHG+Y+
Sbjct: 293 MWDAKNMMCAADPRHGRYL 311
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 512 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI 625
++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 316 VFRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSV 353
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 83.4 bits (197), Expect = 1e-16
Identities = 34/82 (41%), Positives = 57/82 (69%)
Frame = +1
Query: 1 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 180
SG +LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DN
Sbjct: 145 SGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 204
Query: 181 EAIYDICRRNLDIERPTYTNLN 246
EA+YDIC R L + PT+ +LN
Sbjct: 205 EALYDICFRTLKLANPTFGDLN 226
Score = 79.4 bits (187), Expect = 2e-15
Identities = 34/79 (43%), Positives = 49/79 (62%)
Frame = +3
Query: 264 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 443
+S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + LSV E+T
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQ 292
Query: 444 CFEPANQMVKCDPRHGKYM 500
++ N M DPRHG+Y+
Sbjct: 293 MWDAKNMMCAADPRHGRYL 311
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2
Query: 512 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 643
++RG + K+V+ + ++ K + FV+W P K + PT
Sbjct: 316 VFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCDIAPT 359
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 82.6 bits (195), Expect = 2e-16
Identities = 34/82 (41%), Positives = 57/82 (69%)
Frame = +1
Query: 1 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 180
SG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DN
Sbjct: 146 SGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 205
Query: 181 EAIYDICRRNLDIERPTYTNLN 246
EA+YDIC R L + P++ +LN
Sbjct: 206 EALYDICFRTLKLSTPSFGDLN 227
Score = 79.4 bits (187), Expect = 2e-15
Identities = 34/79 (43%), Positives = 50/79 (63%)
Frame = +3
Query: 264 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 443
+S +T SLRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T
Sbjct: 234 MSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQ 293
Query: 444 CFEPANQMVKCDPRHGKYM 500
++ N M DPRHG+Y+
Sbjct: 294 MWDAKNMMCAADPRHGRYL 312
Score = 35.1 bits (77), Expect = 0.046
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 512 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 643
++RG + K+V+ I ++ K + FV+W P K + PPT
Sbjct: 317 MFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPT 360
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 82.6 bits (195), Expect = 2e-16
Identities = 34/82 (41%), Positives = 57/82 (69%)
Frame = +1
Query: 1 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 180
SG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DN
Sbjct: 146 SGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 205
Query: 181 EAIYDICRRNLDIERPTYTNLN 246
EA+YDIC R L + P++ +LN
Sbjct: 206 EALYDICFRTLKLSTPSFGDLN 227
Score = 79.4 bits (187), Expect = 2e-15
Identities = 34/79 (43%), Positives = 50/79 (63%)
Frame = +3
Query: 264 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 443
+S +T SLRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T
Sbjct: 234 MSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQ 293
Query: 444 CFEPANQMVKCDPRHGKYM 500
++ N M DPRHG+Y+
Sbjct: 294 MWDSKNMMCAADPRHGRYL 312
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 512 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 640
++RG + K+V+ I I+ K + FV+W P K + PP
Sbjct: 317 IFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPP 359
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 82.2 bits (194), Expect = 3e-16
Identities = 34/82 (41%), Positives = 57/82 (69%)
Frame = +1
Query: 1 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 180
SG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DN
Sbjct: 145 SGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 204
Query: 181 EAIYDICRRNLDIERPTYTNLN 246
EA+YDIC R L + P++ +LN
Sbjct: 205 EALYDICFRTLKLTTPSFGDLN 226
Score = 78.6 bits (185), Expect = 4e-15
Identities = 33/79 (41%), Positives = 49/79 (62%)
Frame = +3
Query: 264 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 443
+S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQ 292
Query: 444 CFEPANQMVKCDPRHGKYM 500
++ N M DPRHG+Y+
Sbjct: 293 MWDSKNMMCAADPRHGRYL 311
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 512 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 643
++RG + K+V+ + ++ K + FV+W P K + PPT
Sbjct: 316 MFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT 359
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 82.2 bits (194), Expect = 3e-16
Identities = 34/82 (41%), Positives = 57/82 (69%)
Frame = +1
Query: 1 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 180
SG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DN
Sbjct: 145 SGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 204
Query: 181 EAIYDICRRNLDIERPTYTNLN 246
EA+YDIC R L + P++ +LN
Sbjct: 205 EALYDICFRTLKLTTPSFGDLN 226
Score = 78.6 bits (185), Expect = 4e-15
Identities = 33/79 (41%), Positives = 49/79 (62%)
Frame = +3
Query: 264 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 443
+S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQ 292
Query: 444 CFEPANQMVKCDPRHGKYM 500
++ N M DPRHG+Y+
Sbjct: 293 MWDSKNMMCAADPRHGRYL 311
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 512 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 643
++RG + K+V+ + ++ K + FV+W P K + PPT
Sbjct: 316 MFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT 359
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 82.2 bits (194), Expect = 3e-16
Identities = 34/82 (41%), Positives = 57/82 (69%)
Frame = +1
Query: 1 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 180
SG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DN
Sbjct: 145 SGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 204
Query: 181 EAIYDICRRNLDIERPTYTNLN 246
EA+YDIC R L + P++ +LN
Sbjct: 205 EALYDICFRTLKLTTPSFGDLN 226
Score = 78.2 bits (184), Expect = 5e-15
Identities = 33/79 (41%), Positives = 49/79 (62%)
Frame = +3
Query: 264 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 443
+S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292
Query: 444 CFEPANQMVKCDPRHGKYM 500
++ N M DPRHG+Y+
Sbjct: 293 MWDAKNMMCAADPRHGRYL 311
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 512 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 643
++RG + K+V+ + ++ K + FV+W P K + PPT
Sbjct: 316 MFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT 359
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 82.2 bits (194), Expect = 3e-16
Identities = 34/82 (41%), Positives = 57/82 (69%)
Frame = +1
Query: 1 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 180
SG +LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DN
Sbjct: 145 SGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 204
Query: 181 EAIYDICRRNLDIERPTYTNLN 246
EA+YDIC R L + P++ +LN
Sbjct: 205 EALYDICFRTLKLTTPSFGDLN 226
Score = 78.2 bits (184), Expect = 5e-15
Identities = 33/79 (41%), Positives = 49/79 (62%)
Frame = +3
Query: 264 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 443
+S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292
Query: 444 CFEPANQMVKCDPRHGKYM 500
++ N M DPRHG+Y+
Sbjct: 293 MWDSKNMMCAADPRHGRYL 311
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +2
Query: 512 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI 625
++RG + K+V+ + ++ K + FV+W P K +
Sbjct: 316 MFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 353
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 81.8 bits (193), Expect = 4e-16
Identities = 33/82 (40%), Positives = 57/82 (69%)
Frame = +1
Query: 1 SGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 180
SG +LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DN
Sbjct: 145 SGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 204
Query: 181 EAIYDICRRNLDIERPTYTNLN 246
EA+YDIC R L + P++ +LN
Sbjct: 205 EALYDICFRTLKLSTPSFGDLN 226
Score = 78.6 bits (185), Expect = 4e-15
Identities = 33/79 (41%), Positives = 49/79 (62%)
Frame = +3
Query: 264 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 443
+S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQ 292
Query: 444 CFEPANQMVKCDPRHGKYM 500
++ N M DPRHG+Y+
Sbjct: 293 MWDAKNMMCAADPRHGRYL 311
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 512 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 643
++RG + K+V+ + ++ K + FV+W P K + PPT
Sbjct: 316 MFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT 359
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 SGFTSLLMERLSVDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVD 177
SG S L+E L+ Y KK ++++P + S VV+PYNS+LT ++DC ++D
Sbjct: 147 SGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLD 206
Query: 178 NEAIYDICRRNLDIERPTYTNLN 246
N A+ I L + PT+ N
Sbjct: 207 NTALNRIAVERLHLTNPTFAQTN 229
Score = 44.8 bits (101), Expect = 6e-05
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +3
Query: 225 PNLHQPESSHGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV-ISAEK 401
P Q S ++S+ T +LR+ G +N DL +L+P PR HF + Y P+ + +
Sbjct: 223 PTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQA 282
Query: 402 AYHEQLSVAEITNACFEPANQMVKCDPRH 488
+ +V ++ + N MV R+
Sbjct: 283 NVIRKTTVLDVMRRLLQTKNIMVSSYARN 311
Score = 37.1 bits (82), Expect = 0.011
Identities = 13/48 (27%), Positives = 29/48 (60%)
Frame = +2
Query: 503 LLMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTV 646
+L + +G+V P V+ ++ I+ ++ + F+DW P +V ++ + P V
Sbjct: 322 ILNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYV 369
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 SGFTSLLMERLSVDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVD 177
SG S L+E L+ Y KK ++++P + S VV+PYNS+LT ++DC ++D
Sbjct: 147 SGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLD 206
Query: 178 NEAIYDICRRNLDIERPTYTNLN 246
N A+ I L + PT+ N
Sbjct: 207 NTALGRIAVERLHLTNPTFAQTN 229
Score = 44.8 bits (101), Expect = 6e-05
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +3
Query: 225 PNLHQPESSHGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV-ISAEK 401
P Q S ++S+ T +LR+ G +N DL +L+P PR HF + Y P+ + +
Sbjct: 223 PTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQA 282
Query: 402 AYHEQLSVAEITNACFEPANQMVKCDPRH 488
+ +V ++ + N MV R+
Sbjct: 283 NVIRKTTVLDVMRRLLQTKNIMVSSYARN 311
Score = 35.5 bits (78), Expect = 0.035
Identities = 12/48 (25%), Positives = 29/48 (60%)
Frame = +2
Query: 503 LLMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTV 646
+L + +G+V P V+ ++ I+ ++ + F++W P +V ++ + P V
Sbjct: 322 ILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPYV 369
>At1g70140.1 68414.m08071 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 760
Score = 35.5 bits (78), Expect = 0.035
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +2
Query: 269 LDHCFFEIRRRSECGPHRVPD*LGALPPYPLPTGHVRASHLCREG 403
L C RRR GP RV + L PP P+ + V + L REG
Sbjct: 97 LQRCIIARRRRDRVGPVRVENTLPPYPPPPMTSAAVTTTTLAREG 141
>At1g01190.1 68414.m00032 cytochrome P450, putative similar to
cytochrome P450 SP:O48927 from [Glycine max]
Length = 535
Score = 31.1 bits (67), Expect = 0.74
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 303 LNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 443
+++D NL+P PR FPLV + S+ A+ SVAE++NA
Sbjct: 62 ISLDYNRKYKNLIPGPR-GFPLVGSMSLRSSHVAHQRIASVAEMSNA 107
>At1g29200.1 68414.m03573 hypothetical protein contains Pfam
PF03138: Plant protein family. The function of this
family of plant proteins is unknown;
Length = 698
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 634 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 530
LV DT+L TPVD ++ L G VH+ GY
Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394
>At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identical
to endo-polygalacturonase [Arabidopsis thaliana]
GI:2597824
Length = 431
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -3
Query: 219 NVEITA---ADVIDGFIVDHESTVRVLKGCVGGEDRVVGLDDGSGNLR 85
NVEITA + DG + + +RV +G D + ++DG+ NL+
Sbjct: 230 NVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQ 277
>At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 587
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 500 GLLMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 661
G L +G V D A T TK+ + DW P+ FK PP ++P D
Sbjct: 302 GSLPTLQGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355
>At5g61460.1 68418.m07712 structural maintenance of chromosomes
(SMC) family protein very strong similarity to SMC-like
protein (MIM) [Arabidopsis thaliana] GI:5880614;
contains Pfam profile PF02463: RecF/RecN/SMC N terminal
domain
Length = 1057
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 255 HETIQVGVGWALNVEITAADVIDGFIV-DHESTVRVLKGC 139
H T+ G WA +VE +++ FIV DH+ ++ L+GC
Sbjct: 482 HVTLVNGNKWASSVEQALGTLLNAFIVTDHKDSL-TLRGC 520
>At2g15020.1 68415.m01710 expressed protein and genefinder
Length = 526
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +3
Query: 297 GALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVK 473
G N+ L +F ++L+P + F T A + K Y LS+ N+ E N++VK
Sbjct: 212 GLGNLGLKQFSSSLMPRHSLGFSYATEAHGLWILKGYFPILSMNVTNNSSNEVHNKIVK 270
>At1g68080.1 68414.m07777 expressed protein
Length = 383
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -2
Query: 592 DELDSTLGFDGSDGRVHILGYDVTTVQ 512
D + +GFD R+H+LG+DV ++Q
Sbjct: 211 DGSNQNIGFDVCVARLHLLGFDVHSLQ 237
>At1g62870.1 68414.m07099 expressed protein
Length = 796
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +1
Query: 328 RLTWCLTPVSTSHWSRTRQSSLPRR--PTMNSFPSPRSQTHASSPP 459
R + C S S+ SRT L R P NS P P S S PP
Sbjct: 80 RCSLCDAVFSASNPSRTASEHLKRGTCPNFNSLPKPISTISPSPPP 125
>At1g61140.1 68414.m06888 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to ATPase [Homo sapiens] GI:531196; contains
Pfam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain, PF00097:
Zinc finger, C3HC4 type (RING finger)
Length = 1287
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 37 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSD------CAFMVDNEAIYDI 198
+D+ + F P VS A V+PYNS +H D C+F DN+ ++
Sbjct: 285 IDFSSARGISFKFESNPSVSPACVKPYNS-FDSHLADSDLDRPNNYSCSFQ-DNKTVHVK 342
Query: 199 CRRNLDIERPTYTNL 243
+ + E+ Y+++
Sbjct: 343 VKPEAESEKVVYSSV 357
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +3
Query: 561 PSKPSVLSNSSTGVQPVSRSVSTTSHPP--WCPEATWPRFNVPSACCPTP 704
PS+P S+S + + PV S + PP P A +PS P P
Sbjct: 562 PSQPPAASSSLSPLPPVFNSTQSFQSPPVSTTPSAVPEASTIPSPPAPAP 611
>At3g01770.1 68416.m00116 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 620
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 177 VDHESTVRVLKGCVGGEDRVVGLDDGSGNLRRGVDG 70
+ H STVR K VGG +++ G +L G DG
Sbjct: 394 ISHISTVRTEKDSVGGLNQMEDASRGKLSLIEGADG 429
>At1g21090.1 68414.m02638 hydroxyproline-rich glycoprotein family
protein
Length = 242
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 313 TSPSSR-LTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVM 489
T P+S TW + + ++S T +SLP+ +N + + A+SPP++ PV
Sbjct: 82 TKPNSTSFTWYPSRTGSYYFSFTNNTSLPKTCQLNQKLTVQVILAAASPPSQPPATAPVP 141
Query: 490 AS 495
S
Sbjct: 142 VS 143
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,079,935
Number of Sequences: 28952
Number of extensions: 394121
Number of successful extensions: 1410
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1408
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1516419560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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