Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0239.Seq
         (535 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    29   0.13 
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   1.6  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   4.9  
Z22930-1|CAA80513.1|  273|Anopheles gambiae trypsin-related prot...    23   6.4  
AY745221-1|AAU93488.1|   95|Anopheles gambiae cytochrome P450 pr...    23   6.4  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    23   6.4  
CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase ...    23   8.5  

>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 28.7 bits (61), Expect = 0.13
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -2

Query: 204 FAVKN-CPRRCGEKTRTFYMTKGLHRNIFYMHY 109
           FA  N CPRR G +T T + T  L +   + HY
Sbjct: 130 FAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHY 162


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2

Query: 219 DKPRLFAVKNCPRRCGEKTRTFYMTKGLH 133
           +KP +F  K CP  CG KT      + LH
Sbjct: 294 NKP-VFQCKLCPTTCGRKTDLRIHVQNLH 321


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 170  KKQERFT*RKDYTEIFFICIIS 105
            K+ E F+   DY  + FICI S
Sbjct: 1646 KQSETFSAVLDYLNMIFICIFS 1667


>Z22930-1|CAA80513.1|  273|Anopheles gambiae trypsin-related
           protease protein.
          Length = 273

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 5/31 (16%)
 Frame = -2

Query: 459 LTLRYDGKYVCGNIFNNS-----PARCIFLF 382
           ++L+Y+GK+ CG    NS      A CI L+
Sbjct: 62  ISLQYNGKHHCGGSILNSKWILTAAHCIDLY 92


>AY745221-1|AAU93488.1|   95|Anopheles gambiae cytochrome P450
           protein.
          Length = 95

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +1

Query: 46  SCTFGFYCTILKNHTNGDNLL 108
           SC FG  C  LKN   G  LL
Sbjct: 30  SCAFGLQCNSLKN--GGSKLL 48


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +1

Query: 46  SCTFGFYCTILKNHTNGDNLL 108
           SC FG  C  LKN   G  LL
Sbjct: 189 SCAFGLQCNSLKN--GGSKLL 207


>CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase
           protein.
          Length = 573

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 161 LVFSPHLRGQFFTAKRRGLSRLVRKTYRSNQH 256
           LV    L G FFTA    +   V+  + +N H
Sbjct: 343 LVGYTDLEGAFFTALDNAIDPTVKGQFNANPH 374


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,789
Number of Sequences: 2352
Number of extensions: 11516
Number of successful extensions: 70
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)