Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0239.Seq
         (535 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK122613-1|BAC85490.1|  715|Homo sapiens protein ( Homo sapiens ...    32   1.1  
AY823163-1|AAX24103.1| 1218|Homo sapiens cation-transporting P5-...    32   1.5  

>AK122613-1|BAC85490.1|  715|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16025 fis, clone CTONG2004062, highly  similar
           to ATPase subunit 6. ).
          Length = 715

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 13/25 (52%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
 Frame = -1

Query: 340 YLRKKIFC-FLLNLRFPLSKSTRQS 269
           Y+RKK+FC +L  L+FP+SK   +S
Sbjct: 85  YMRKKVFCLYLYTLKFPVSKKWEES 109


>AY823163-1|AAX24103.1| 1218|Homo sapiens cation-transporting
           P5-ATPase protein.
          Length = 1218

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 13/25 (52%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
 Frame = -1

Query: 340 YLRKKIFC-FLLNLRFPLSKSTRQS 269
           Y+RKK+FC +L  L+FP+SK   +S
Sbjct: 85  YMRKKVFCLYLSTLKFPVSKKWEES 109


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,884,088
Number of Sequences: 237096
Number of extensions: 1640421
Number of successful extensions: 2910
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2846
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)