Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0238.Seq
         (806 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            25   3.6  
CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative dodecenoy...    24   4.8  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 419 MCADDAKKRAYLYSTLDNENYHVLASL 339
           +C DD   +  ++ T   E YH LA +
Sbjct: 66  LCIDDTTVKFEIWDTAGQERYHSLAPM 92


>CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative
           dodecenoylCoA deltaisomerase protein.
          Length = 324

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 283 LDVGFLGIILEVPASLCQASNLAL 212
           LD+G +  ++ V A L QA NLA+
Sbjct: 216 LDIGLVNRVVAVGAGLGQAYNLAM 239


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 745,021
Number of Sequences: 2352
Number of extensions: 14861
Number of successful extensions: 14
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85239615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)