Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0237.Seq
         (595 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   1.9  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   1.9  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   7.8  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    21   7.8  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -1

Query: 565 MYEDTSFLISSNLGSLYGGQWNPFCLLL 482
           ++ D S ++   LG  Y G ++ +CLL+
Sbjct: 262 LWVDLSHMMQQ-LGKAYSGMYSMYCLLI 288


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -1

Query: 565 MYEDTSFLISSNLGSLYGGQWNPFCLLL 482
           ++ D S ++   LG  Y G ++ +CLL+
Sbjct: 262 LWVDLSHMMQQ-LGKAYSGMYSMYCLLI 288


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 318 QRFHQEHDHRNLS 356
           + FH+EHD R  S
Sbjct: 260 RHFHEEHDTRRAS 272


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 247 HNRIALWKFETSKY 288
           HN+  +WK  T+KY
Sbjct: 90  HNKQQMWKELTAKY 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,189
Number of Sequences: 336
Number of extensions: 2944
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)