Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0237.Seq
(595 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 151 5e-37
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 151 5e-37
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 151 5e-37
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 151 5e-37
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 100 1e-21
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 93 1e-19
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 68 4e-12
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 67 7e-12
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 38 0.004
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 38 0.004
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 38 0.005
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 38 0.007
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 35 0.047
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 35 0.047
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 35 0.047
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.19
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.19
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 33 0.19
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 31 0.44
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 31 0.44
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 31 0.77
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.0
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 30 1.0
At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 30 1.3
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.3
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.3
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 1.8
At4g26650.1 68417.m03840 RNA recognition motif (RRM)-containing ... 28 4.1
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 28 4.1
At1g62660.1 68414.m07071 beta-fructosidase (BFRUCT3) / beta-fruc... 28 5.4
At5g55550.3 68418.m06922 RNA recognition motif (RRM)-containing ... 27 7.1
At5g55550.2 68418.m06921 RNA recognition motif (RRM)-containing ... 27 7.1
At5g55550.1 68418.m06920 RNA recognition motif (RRM)-containing ... 27 7.1
At5g27540.1 68418.m03297 GTP-binding protein-related low similar... 27 9.4
At4g20430.1 68417.m02981 subtilase family protein contains Pfam ... 27 9.4
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 151 bits (365), Expect = 5e-37
Identities = 70/84 (83%), Positives = 77/84 (91%)
Frame = +1
Query: 256 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 435
IALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTR
Sbjct: 75 IALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTR 134
Query: 436 EHALLAFTLGVKQLIVGVNKMDST 507
EHALLAFTLGVKQ+I NKMD+T
Sbjct: 135 EHALLAFTLGVKQMICCCNKMDAT 158
Score = 130 bits (313), Expect = 9e-31
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 216 DKLKAERE 239
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/26 (69%), Positives = 23/26 (88%)
Frame = +3
Query: 510 PPYSEPRFEEIKKEVSSYIKKIGYNP 587
P YS+ R++EI KEVSSY+KK+GYNP
Sbjct: 160 PKYSKARYDEIIKEVSSYLKKVGYNP 185
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 151 bits (365), Expect = 5e-37
Identities = 70/84 (83%), Positives = 77/84 (91%)
Frame = +1
Query: 256 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 435
IALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTR
Sbjct: 75 IALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTR 134
Query: 436 EHALLAFTLGVKQLIVGVNKMDST 507
EHALLAFTLGVKQ+I NKMD+T
Sbjct: 135 EHALLAFTLGVKQMICCCNKMDAT 158
Score = 130 bits (313), Expect = 9e-31
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 216 DKLKAERE 239
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/26 (69%), Positives = 23/26 (88%)
Frame = +3
Query: 510 PPYSEPRFEEIKKEVSSYIKKIGYNP 587
P YS+ R++EI KEVSSY+KK+GYNP
Sbjct: 160 PKYSKARYDEIIKEVSSYLKKVGYNP 185
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 151 bits (365), Expect = 5e-37
Identities = 70/84 (83%), Positives = 77/84 (91%)
Frame = +1
Query: 256 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 435
IALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTR
Sbjct: 75 IALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTR 134
Query: 436 EHALLAFTLGVKQLIVGVNKMDST 507
EHALLAFTLGVKQ+I NKMD+T
Sbjct: 135 EHALLAFTLGVKQMICCCNKMDAT 158
Score = 130 bits (313), Expect = 9e-31
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 216 DKLKAERE 239
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/26 (69%), Positives = 23/26 (88%)
Frame = +3
Query: 510 PPYSEPRFEEIKKEVSSYIKKIGYNP 587
P YS+ R++EI KEVSSY+KK+GYNP
Sbjct: 160 PKYSKARYDEIIKEVSSYLKKVGYNP 185
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 151 bits (365), Expect = 5e-37
Identities = 70/84 (83%), Positives = 77/84 (91%)
Frame = +1
Query: 256 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 435
IALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTR
Sbjct: 75 IALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTR 134
Query: 436 EHALLAFTLGVKQLIVGVNKMDST 507
EHALLAFTLGVKQ+I NKMD+T
Sbjct: 135 EHALLAFTLGVKQMICCCNKMDAT 158
Score = 130 bits (313), Expect = 9e-31
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +3
Query: 36 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 215
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 216 DKLKAERE 239
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/26 (69%), Positives = 23/26 (88%)
Frame = +3
Query: 510 PPYSEPRFEEIKKEVSSYIKKIGYNP 587
P YS+ R++EI KEVSSY+KK+GYNP
Sbjct: 160 PKYSKARYDEIIKEVSSYLKKVGYNP 185
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 99.5 bits (237), Expect = 1e-21
Identities = 46/77 (59%), Positives = 56/77 (72%)
Frame = +1
Query: 271 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 450
FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + GQTREH L
Sbjct: 174 FETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQL 233
Query: 451 AFTLGVKQLIVGVNKMD 501
A TLGV +LIV VNKMD
Sbjct: 234 AKTLGVSKLIVVVNKMD 250
Score = 68.1 bits (159), Expect = 4e-12
Identities = 28/64 (43%), Positives = 46/64 (71%)
Frame = +3
Query: 45 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 224
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 225 KAER 236
+ ER
Sbjct: 158 EEER 161
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 93.5 bits (222), Expect = 1e-19
Identities = 43/96 (44%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Frame = +1
Query: 256 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK-NGQT 432
+A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEAG GQT
Sbjct: 307 VAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLKGQT 366
Query: 433 REHALLAFTLGVKQLIVGVNKMDSTDHHTVSPDLRK 540
REHA + GV+Q+IV +NKMD + DL K
Sbjct: 367 REHARVLRGFGVEQVIVAINKMDIVGYSKERFDLIK 402
Score = 77.4 bits (182), Expect = 7e-15
Identities = 32/63 (50%), Positives = 46/63 (73%)
Frame = +3
Query: 51 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 230
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 231 ERE 239
ERE
Sbjct: 298 ERE 300
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 68.1 bits (159), Expect = 4e-12
Identities = 33/81 (40%), Positives = 48/81 (59%)
Frame = +1
Query: 268 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 447
++ET + +D PGH D++KNMITG +Q D A+L+V+ G QT+EH L
Sbjct: 136 EYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHIL 188
Query: 448 LAFTLGVKQLIVGVNKMDSTD 510
LA +GV ++V +NK D D
Sbjct: 189 LAKQVGVPDMVVFLNKEDQVD 209
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 33 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 167
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 67.3 bits (157), Expect = 7e-12
Identities = 33/81 (40%), Positives = 49/81 (60%)
Frame = +1
Query: 268 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 447
++ET+K + +D PGH D++KNMITG +Q D +L+V+ G QT+EH L
Sbjct: 124 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHIL 176
Query: 448 LAFTLGVKQLIVGVNKMDSTD 510
LA +GV L+ +NK+D D
Sbjct: 177 LARQVGVPSLVCFLNKVDVVD 197
Score = 32.7 bits (71), Expect = 0.19
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 42 KEKTHINIVVIGHVDSGKSTTT 107
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +1
Query: 277 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 456
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 457 TLGVKQLIVGVNKMD 501
+ +K +I+ NK+D
Sbjct: 178 MMRLKHIIILQNKID 192
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +1
Query: 277 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 456
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 457 TLGVKQLIVGVNKMD 501
+ +K +I+ NK+D
Sbjct: 178 MMRLKHIIILQNKID 192
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 37.9 bits (84), Expect = 0.005
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +1
Query: 271 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 438
FE SK +V+ +D PGH + M+ G + D A+L++AA QT E
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165
Query: 439 HALLAFTLGVKQLIVGVNKMD 501
H + +K +I+ NK+D
Sbjct: 166 HLAAVEIMQLKHIIILQNKID 186
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 37.5 bits (83), Expect = 0.007
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +1
Query: 289 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 468
+V+ +D PGH + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 469 KQLIVGVNKMD 501
K +I+ NK+D
Sbjct: 174 KDIIIIQNKID 184
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 34.7 bits (76), Expect = 0.047
Identities = 28/93 (30%), Positives = 42/93 (45%)
Frame = +1
Query: 274 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 453
E S Y + +ID PGH DF + S A+L+V A G QT + LA
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG-------VQAQTVANFYLA 183
Query: 454 FTLGVKQLIVGVNKMDSTDHHTVSPDLRKSRRK 552
F + ++ +NK+D T P+ K++ K
Sbjct: 184 FEANL-TIVPVINKIDQP---TADPERVKAQLK 212
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 24 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK 143
D K EK N +I H+D GKST L+ G I K
Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK 95
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 34.7 bits (76), Expect = 0.047
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 229 LSVSTYHNRIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 396
+S+ + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 190 ISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 34.7 bits (76), Expect = 0.047
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 229 LSVSTYHNRIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 396
+S+ + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 190 ISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.19
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 292 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 396
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCGG 134
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
Score = 32.7 bits (71), Expect = 0.19
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 286 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 396
Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 74 YSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 32.7 bits (71), Expect = 0.19
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 48 KTHINIVVIGHVDSGKSTTTGHLIYKCG 131
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 31.5 bits (68), Expect = 0.44
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 286 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 441
Y V IID PGH DF + D A+L++ + G I+ + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCGGI 137
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 31.5 bits (68), Expect = 0.44
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 286 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 441
Y V IID PGH DF + D A+L++ + G I+ + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCGGI 137
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 30.7 bits (66), Expect = 0.77
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 271 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 396
+E + + + +ID PGH DF + + + A+L+V A G
Sbjct: 147 YEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 158
N +I H+D GKST L+ G + R +++
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +1
Query: 298 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 477
+ID PGH F G+S D A+L+V + + G+ QT E +L + +
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEF 756
Query: 478 IVGVNKMD 501
I+ +NK+D
Sbjct: 757 IIALNKVD 764
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 30.3 bits (65), Expect = 1.0
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +1
Query: 292 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 471
+ +ID PGH F G++ D A+L+V + G+ QT E L VK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK 610
Query: 472 QLIVGVNKMD 501
I+ +NK+D
Sbjct: 611 -FIIALNKVD 619
>At3g01360.1 68416.m00057 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 319
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +1
Query: 301 IDAPGHRDFIKNMITGTSQADCAV-LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 477
I GH D+ + T Q +C + L+V TG F +KNG R+ LG +
Sbjct: 226 IKCKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAELE 285
Query: 478 IVGVNKMDSTDHHTV 522
+ +DS + V
Sbjct: 286 NLSTFTLDSDEEDEV 300
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 298 IIDAPGHRDFIKNMITGTSQADCAVLIV 381
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 298 IIDAPGHRDFIKNMITGTSQADCAVLIV 381
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 280 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 381
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 60 NIVVIGHVDSGKSTTTGHLIYKCG 131
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At4g26650.1 68417.m03840 RNA recognition motif (RRM)-containing
protein contains Pfam profile: PF00076 RNA recognition
motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 455
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -2
Query: 336 VLDEISVSRSINDGNIVLASFELPESNTIVIRTHAQPLVCPIPKH 202
V + + + + I DG V A +P + V++ HA P+ P H
Sbjct: 68 VAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSH 112
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +1
Query: 301 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 480
+D PGH F G D A+++VAA G QT E A+ ++
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG-------IRPQTNE-AIAHAKAAAVPIV 608
Query: 481 VGVNKMD 501
+ +NK+D
Sbjct: 609 IAINKID 615
>At1g62660.1 68414.m07071 beta-fructosidase (BFRUCT3) /
beta-fructofuranosidase / invertase, vacuolar identical
to beta-fructosidase GB:CAA67560 GI:1429209 [Arabidopsis
thaliana]; supported by full-length cDNA GI:14517549;
identical to cDNA Beta-fructosidase GI:3115854
Length = 648
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = -2
Query: 531 IWAHCMVVSGIHFVYSYDELFDTEGESEQGMLTG-LTVLRDTSFEFTGTGSYDE 373
+W H + IH++Y + + G+ TG T L D S TGS DE
Sbjct: 148 VWGHAVSKDLIHWLYLPIAMVPDQWYDANGVWTGSATFLDDGSIVMLYTGSTDE 201
>At5g55550.3 68418.m06922 RNA recognition motif (RRM)-containing
protein similar to DAZ associated protein 1 [Homo
sapiens] GI:8671754; contains InterPro entry IPR000504:
RNA-binding region RNP-1 (RNA recognition motif) (RRM)
Length = 460
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -2
Query: 336 VLDEISVSRSINDGNIVLASFELPESNTIVIRTHAQPLVCPIPKH 202
V + + + + I DG V A +P + V++ HA P+ P H
Sbjct: 59 VSERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVH 103
>At5g55550.2 68418.m06921 RNA recognition motif (RRM)-containing
protein similar to DAZ associated protein 1 [Homo
sapiens] GI:8671754; contains InterPro entry IPR000504:
RNA-binding region RNP-1 (RNA recognition motif) (RRM)
Length = 460
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -2
Query: 336 VLDEISVSRSINDGNIVLASFELPESNTIVIRTHAQPLVCPIPKH 202
V + + + + I DG V A +P + V++ HA P+ P H
Sbjct: 59 VSERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVH 103
>At5g55550.1 68418.m06920 RNA recognition motif (RRM)-containing
protein similar to DAZ associated protein 1 [Homo
sapiens] GI:8671754; contains InterPro entry IPR000504:
RNA-binding region RNP-1 (RNA recognition motif) (RRM)
Length = 448
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -2
Query: 336 VLDEISVSRSINDGNIVLASFELPESNTIVIRTHAQPLVCPIPKH 202
V + + + + I DG V A +P + V++ HA P+ P H
Sbjct: 59 VSERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVH 103
>At5g27540.1 68418.m03297 GTP-binding protein-related low similarity
to Mig-2-like GTPase Mtl [Drosophila melanogaster]
GI:7271872; contains Pfam profile PF00036: EF hand
Length = 648
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/88 (21%), Positives = 37/88 (42%)
Frame = +1
Query: 280 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFT 459
++Y +D PG ++ ++ G + LIVAA T F + + + F
Sbjct: 2 ARYAAGAVDCPGSPKSVRIVVVGDKGTGKSSLIVAAATDSFPPNVPPVLPDYKLPIEFFP 61
Query: 460 LGVKQLIVGVNKMDSTDHHTVSPDLRKS 543
G+ IV + D V+ +L+++
Sbjct: 62 DGIPVTIVDTSSRPE-DRDIVAEELKRA 88
>At4g20430.1 68417.m02981 subtilase family protein contains Pfam
profile: PF00082 subtilase family
Length = 856
Score = 27.1 bits (57), Expect = 9.4
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = -2
Query: 474 LFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSIN 301
+FDT E L G+ F +TGT ++ IS GS D L I+VS+ N
Sbjct: 714 IFDTSFEDYMSFLCGINGSAPVVFNYTGTNCLRNNATIS--GS-DLNLPSITVSKLNN 768
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,992,636
Number of Sequences: 28952
Number of extensions: 265796
Number of successful extensions: 846
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1180950720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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