Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0236.Seq
(353 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69735-1|CAA93623.1| 162|Tribolium castaneum initiation factor ... 23 1.2
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 23 1.2
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 22 2.1
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 22 2.1
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 22 2.1
EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine vasopre... 21 2.8
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 21 3.7
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 4.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 4.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 4.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 4.9
>Z69735-1|CAA93623.1| 162|Tribolium castaneum initiation factor
5-like protein protein.
Length = 162
Score = 22.6 bits (46), Expect = 1.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 54 LDFQNETLNGSLNDNDFKIIDD 119
+D QNE+L S+N+N DD
Sbjct: 94 VDDQNESLEASVNENSKNGDDD 115
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 22.6 bits (46), Expect = 1.2
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +3
Query: 27 PKCFNIDYGLDFQNETLNGSLNDNDFK 107
PKC D+G F + T SL D +
Sbjct: 257 PKCVLSDHGTQFISNTWQNSLRAADIQ 283
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 21.8 bits (44), Expect = 2.1
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 178 GMNSSKSEKKPDQKFENNIYSNTLTNENYLKTKMILT 288
G + + KK D+K + I +E KTK I T
Sbjct: 251 GEDEDEDTKKEDKKKKKTIKEKYTEDEELNKTKPIWT 287
Score = 19.8 bits (39), Expect = 8.6
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 261 LFENKDDTNNFK 296
LFENK NN K
Sbjct: 340 LFENKKRKNNIK 351
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 21.8 bits (44), Expect = 2.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 121 WSSIILKSLSFKDPFKVSFW 62
+ I + SFK P+K S W
Sbjct: 375 YHDIWMSGESFKSPYKASCW 394
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 21.8 bits (44), Expect = 2.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 121 WSSIILKSLSFKDPFKVSFW 62
+ I + SFK P+K S W
Sbjct: 375 YHDIWMSGESFKSPYKASCW 394
>EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine
vasopressin receptor protein.
Length = 403
Score = 21.4 bits (43), Expect = 2.8
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +3
Query: 87 LNDNDFKIIDDHKNTTNTLKDE 152
+++N + D H++ NT +DE
Sbjct: 11 ISENSTYLFDKHEDRNNTDRDE 32
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 21.0 bits (42), Expect = 3.7
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 99 DFKIIDDHKNTT 134
D K++D KNTT
Sbjct: 164 DSKVVDSRKNTT 175
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 4.9
Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +1
Query: 136 TLSKTNGFQNSFL---NGMNSSKSEKKPDQKFENNIYSNTLTNENYLKTKMILTISNTRH 306
TL N + N+ + N NS S FEN + +NY + L + +
Sbjct: 1489 TLGAKNEYGNNNVVARNHRNSVASSIPAKDVFENGHVNKAFEEDNYDHRRNSLQMQQRNN 1548
Query: 307 VT 312
VT
Sbjct: 1549 VT 1550
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 4.9
Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +1
Query: 136 TLSKTNGFQNSFL---NGMNSSKSEKKPDQKFENNIYSNTLTNENYLKTKMILTISNTRH 306
TL N + N+ + N NS S FEN + +NY + L + +
Sbjct: 1489 TLGAKNEYGNNNVVARNHRNSVASSIPAKDVFENGHVNKAFEEDNYDHRRNSLQMQQRNN 1548
Query: 307 VT 312
VT
Sbjct: 1549 VT 1550
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 20.6 bits (41), Expect = 4.9
Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +1
Query: 136 TLSKTNGFQNSFL---NGMNSSKSEKKPDQKFENNIYSNTLTNENYLKTKMILTISNTRH 306
TL N + N+ + N NS S FEN + +NY + L + +
Sbjct: 1489 TLGAKNEYGNNNVVARNHRNSVASSIPAKDVFENGHVNKAFEEDNYDHRRNSLQMQQRNN 1548
Query: 307 VT 312
VT
Sbjct: 1549 VT 1550
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 20.6 bits (41), Expect = 4.9
Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +1
Query: 136 TLSKTNGFQNSFL---NGMNSSKSEKKPDQKFENNIYSNTLTNENYLKTKMILTISNTRH 306
TL N + N+ + N NS S FEN + +NY + L + +
Sbjct: 1489 TLGAKNEYGNNNVVARNHRNSVASSIPAKDVFENGHVNKAFEEDNYDHRRNSLQMQQRNN 1548
Query: 307 VT 312
VT
Sbjct: 1549 VT 1550
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,272
Number of Sequences: 336
Number of extensions: 1395
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used: 7087595
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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