Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0236.Seq
(353 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC042684-1|AAH42684.1| 663|Homo sapiens RNF145 protein protein. 29 3.1
AK056513-1|BAB71200.1| 691|Homo sapiens protein ( Homo sapiens ... 29 4.1
Y16718-1|CAA76349.1| 519|Homo sapiens filensin protein. 28 7.2
Y16717-1|CAA76348.1| 665|Homo sapiens filensin protein. 28 7.2
BC041483-1|AAH41483.1| 540|Homo sapiens BFSP1 protein protein. 28 7.2
AL132765-1|CAH74032.1| 540|Homo sapiens beaded filament structu... 28 7.2
AL031664-6|CAB89430.1| 665|Homo sapiens beaded filament structu... 28 7.2
AL031664-1|CAI21689.1| 540|Homo sapiens beaded filament structu... 28 7.2
BC037574-1|AAH37574.1| 366|Homo sapiens ubiquitin specific pept... 28 9.5
AK024318-1|BAB14881.1| 366|Homo sapiens protein ( Homo sapiens ... 28 9.5
AK022614-1|BAB14133.1| 366|Homo sapiens protein ( Homo sapiens ... 28 9.5
>BC042684-1|AAH42684.1| 663|Homo sapiens RNF145 protein protein.
Length = 663
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 145 LRVLVVFLWSSIILKSLSFKDPFKVSFWKSRP*SILKHF-GKSDCFFIL 2
L +++ + +SI+ L DP ++ SR S+ KHF S C F+L
Sbjct: 342 LSIILFIVVASILQSMLEIADPIVLALGASRDKSLWKHFRAASLCLFLL 390
>AK056513-1|BAB71200.1| 691|Homo sapiens protein ( Homo sapiens
cDNA FLJ31951 fis, clone NT2RP7007177, weakly similar to
Homo sapiens multiple membrane spanning receptor TRC8
mRNA. ).
Length = 691
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 145 LRVLVVFLWSSIILKSLSFKDPFKVSFWKSRP*SILKHF-GKSDCFFIL 2
L +++ + +SI+ L DP ++ SR S+ KHF S C F+L
Sbjct: 370 LSIILFIVVASILQSMLEIADPIVLALGASRDKSLWKHFRAVSLCLFLL 418
>Y16718-1|CAA76349.1| 519|Homo sapiens filensin protein.
Length = 519
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 78 NGSLNDNDFKIIDDHKNTTNTLKDEWFSKFFPERNEFIKIRKE 206
NG+L D K ++D K LK+E SKF E E + +E
Sbjct: 237 NGALEDAPLKGLEDTKLVQVVLKEESESKFESESKEVSPLTQE 279
>Y16717-1|CAA76348.1| 665|Homo sapiens filensin protein.
Length = 665
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 78 NGSLNDNDFKIIDDHKNTTNTLKDEWFSKFFPERNEFIKIRKE 206
NG+L D K ++D K LK+E SKF E E + +E
Sbjct: 383 NGALEDAPLKGLEDTKLVQVVLKEESESKFESESKEVSPLTQE 425
>BC041483-1|AAH41483.1| 540|Homo sapiens BFSP1 protein protein.
Length = 540
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 78 NGSLNDNDFKIIDDHKNTTNTLKDEWFSKFFPERNEFIKIRKE 206
NG+L D K ++D K LK+E SKF E E + +E
Sbjct: 258 NGALEDAPLKGLEDTKLVQVVLKEESESKFESESKEVSPLTQE 300
>AL132765-1|CAH74032.1| 540|Homo sapiens beaded filament structural
protein 1, filensin protein.
Length = 540
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 78 NGSLNDNDFKIIDDHKNTTNTLKDEWFSKFFPERNEFIKIRKE 206
NG+L D K ++D K LK+E SKF E E + +E
Sbjct: 258 NGALEDAPLKGLEDTKLVQVVLKEESESKFESESKEVSPLTQE 300
>AL031664-6|CAB89430.1| 665|Homo sapiens beaded filament structural
protein 1, filensin protein.
Length = 665
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 78 NGSLNDNDFKIIDDHKNTTNTLKDEWFSKFFPERNEFIKIRKE 206
NG+L D K ++D K LK+E SKF E E + +E
Sbjct: 383 NGALEDAPLKGLEDTKLVQVVLKEESESKFESESKEVSPLTQE 425
>AL031664-1|CAI21689.1| 540|Homo sapiens beaded filament structural
protein 1, filensin protein.
Length = 540
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 78 NGSLNDNDFKIIDDHKNTTNTLKDEWFSKFFPERNEFIKIRKE 206
NG+L D K ++D K LK+E SKF E E + +E
Sbjct: 258 NGALEDAPLKGLEDTKLVQVVLKEESESKFESESKEVSPLTQE 300
>BC037574-1|AAH37574.1| 366|Homo sapiens ubiquitin specific
peptidase 46 protein.
Length = 366
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 112 LMTIKTQLTLSKTNGFQNSFL-NG-MNSSKSEKKPDQKFENNIYSNTLTNE 258
L TI L K QN L NG MN KP+ + + I+ TLTNE
Sbjct: 129 LNTIADILQEEKKQEKQNGKLKNGNMNEPAENNKPELTWVHEIFQGTLTNE 179
>AK024318-1|BAB14881.1| 366|Homo sapiens protein ( Homo sapiens
cDNA FLJ14256 fis, clone PLACE1000007, weakly similar to
PROBABLE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE R10E11.3
(EC ).
Length = 366
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 112 LMTIKTQLTLSKTNGFQNSFL-NG-MNSSKSEKKPDQKFENNIYSNTLTNE 258
L TI L K QN L NG MN KP+ + + I+ TLTNE
Sbjct: 129 LNTIADILQEEKKQEKQNGKLKNGNMNEPAENNKPELTWVHEIFQGTLTNE 179
>AK022614-1|BAB14133.1| 366|Homo sapiens protein ( Homo sapiens
cDNA FLJ12552 fis, clone NT2RM4000712, moderately
similar to Homo sapiens ubiquitin hydrolyzing enzyme I
(UBH1) mRNA. ).
Length = 366
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 112 LMTIKTQLTLSKTNGFQNSFL-NG-MNSSKSEKKPDQKFENNIYSNTLTNE 258
L TI L K QN L NG MN KP+ + + I+ TLTNE
Sbjct: 129 LNTIADILQEEKKQEKQNGKLKNGNMNEPAENNKPELTWVHEIFQGTLTNE 179
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,083,907
Number of Sequences: 237096
Number of extensions: 585958
Number of successful extensions: 1428
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1428
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2075554296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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