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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0236.Seq
         (353 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g17250.1 68414.m02101 leucine-rich repeat family protein cont...    31   0.17 
At5g49530.1 68418.m06130 SIN-like family protein low similarity ...    27   2.7  
At2g41830.1 68415.m05169 cyclin-related contains Pfam profile PF...    27   2.7  
At2g17036.1 68415.m01966 F-box family protein  ; similar to SKP1...    27   2.7  
At4g12350.1 68417.m01953 transcription factor, putative (MYB42) ...    27   3.6  
At5g23350.1 68418.m02731 GRAM domain-containing protein / ABA-re...    27   4.7  
At3g57400.1 68416.m06390 expressed protein                             27   4.7  
At3g26840.1 68416.m03357 esterase/lipase/thioesterase family pro...    27   4.7  
At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR...    26   6.3  
At2g01880.1 68415.m00121 purple acid phosphatase (PAP7) identica...    26   6.3  
At5g23360.1 68418.m02732 GRAM domain-containing protein / ABA-re...    26   8.3  
At5g06730.1 68418.m00761 peroxidase, putative similar to peroxid...    26   8.3  

>At1g17250.1 68414.m02101 leucine-rich repeat family protein
           contains leucine rich-repeat (LRR) domains Pfam:PF00560,
           INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon
           esculentum] gi|3894387|gb|AAC78593
          Length = 756

 Score = 31.5 bits (68), Expect = 0.17
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -2

Query: 322 TFFKSHGECLKLLVSSLFSNNFR*SMY*SKCYFQ-TFDLVSFRILMNSF 179
           TF      C  + +  L SN  +  +  S  + Q TFDL+SF +  NSF
Sbjct: 166 TFRNGSNRCFPIRIVDLSSNFLQGEILPSSIFMQGTFDLISFNVSKNSF 214


>At5g49530.1 68418.m06130 SIN-like family protein low similarity to
           Sex-lethal interactor [Drosophila melanogaster]
           GI:6049274; contains Pfam profile PF04801: Sin-like
           protein conserved region
          Length = 689

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -2

Query: 142 RVLVVFLWSSIILKSLSFKDPFKVSFWKSRP 50
           R+L  F     +LK   FK+P  VSF KS P
Sbjct: 435 RMLTEFAKERHVLKDWKFKEPTDVSFIKSYP 465


>At2g41830.1 68415.m05169 cyclin-related contains Pfam profile
           PF02984: Cyclin, C-terminal domain
          Length = 1025

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 30  KCFNIDYGLDFQNETLNGSLNDNDFKIIDDHK 125
           K FN+    DF   TL G   D    ++DDHK
Sbjct: 724 KAFNLFSLADFTKVTLQGPRLDPFLNLVDDHK 755


>At2g17036.1 68415.m01966 F-box family protein  ; similar to SKP1
           interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250
          Length = 428

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -2

Query: 238 SKCYFQTFDLVSFRILMNSFRS 173
           SKC   +FDL+ FR + +S+RS
Sbjct: 15  SKCLESSFDLIQFRSVCSSWRS 36


>At4g12350.1 68417.m01953 transcription factor, putative (MYB42)
           identical to cDNA putative transcription factor (MYB42)
           GI:5823330
          Length = 168

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +3

Query: 24  LPKCFNIDYGLDFQNETLNGSLNDNDFKIIDDHKNTTNTLKD 149
           L K F  D  L  ++ET + + N ND KI++    TTNT+ D
Sbjct: 11  LNKVFT-DTNLVDKSETSSKADNVNDNKIVEIDGTTTNTIDD 51


>At5g23350.1 68418.m02731 GRAM domain-containing protein /
           ABA-responsive protein-related contains similarity to
           ABA-responsive protein in barley (GI:4103635) [Hordeum
           vulgare] [J. Exp. Bot. 50, 727-728 (1999); contains Pfam
           PF02893: GRAM domain
          Length = 280

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +1

Query: 172 LNGMNSSKSEKKPDQKF 222
           +NG+N S++ KKP QK+
Sbjct: 229 INGVNQSQNTKKPSQKY 245


>At3g57400.1 68416.m06390 expressed protein
          Length = 474

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 90  NDNDFKIIDDHKNTTNTLKDEW 155
           ND+  K++D H+N++N +   W
Sbjct: 188 NDSFLKLVDVHRNSSNQIDSVW 209


>At3g26840.1 68416.m03357 esterase/lipase/thioesterase family
           protein contains Pfam profile PF03096: Ndr family
          Length = 701

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = +3

Query: 144 KDEWFSKFFPERNEFIKIRKETRSKV 221
           K E +  F+PER+EF+++  +  +K+
Sbjct: 535 KGEEYKLFWPERSEFVRVASKFGAKI 560


>At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1038

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 39  NIDYGLDFQNETLNGSLNDNDFK 107
           N D+ L+ QN+ L+  LN ND K
Sbjct: 253 NYDWKLNLQNQLLSKILNQNDVK 275


>At2g01880.1 68415.m00121 purple acid phosphatase (PAP7) identical
           to purple acid phosphatase (PAP7) GI:20257476 from
           [Arabidopsis thaliana]; contains Pfam profile: PF00149
           calcineurin-like phosphoesterase
          Length = 328

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +3

Query: 36  FNIDYGLDFQNETLNGSLNDNDFKIIDDHKNTTNTLKDEWFS 161
           F I  G +F ++ L G +ND  F+    H  T  +L+ +W+S
Sbjct: 75  FVISVGDNFYDDGLKG-VNDPSFEASFSHIYTHPSLQKQWYS 115


>At5g23360.1 68418.m02732 GRAM domain-containing protein /
           ABA-responsive protein-related contains similarity to
           ABA-responsive protein in barley (GI:4103635) [Hordeum
           vulgare] [J. Exp. Bot. 50, 727-728 (1999); contains Pfam
           PF02893: GRAM domain]
          Length = 210

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 172 LNGMNSSKSEKKPDQKFENNIYSNTLTNENY 264
           +NG+N S++ KKP Q+     Y   +T +NY
Sbjct: 159 INGVNQSQNTKKPSQR-----YLEVVTVDNY 184


>At5g06730.1 68418.m00761 peroxidase, putative similar to peroxidase
           [Arabidopsis thaliana] gi|1491617|emb|CAA68212
          Length = 358

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = +1

Query: 127 TQLTLSKTNGFQNSFLNGMNSSKSEKKPDQKFENNIYSNTLTNENYLKTKMIL 285
           T L LS  + F N++   + S+    + DQ+  +N  S T+   N   +   L
Sbjct: 249 TNLDLSTPDAFDNNYFTNLQSNNGLLQSDQELFSNTGSATVPIVNSFASNQTL 301


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,354,092
Number of Sequences: 28952
Number of extensions: 108977
Number of successful extensions: 369
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 369
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 449370720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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