Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0235.Seq
(701 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 27 0.76
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 26 1.00
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 26 1.00
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 25 1.7
AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein p... 25 1.7
AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein p... 25 3.0
AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein. 24 4.0
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 24 5.3
CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein. 23 7.0
AJ439060-8|CAD27759.1| 808|Anopheles gambiae putative V-ATPase ... 23 7.0
AF510719-1|AAP47148.1| 591|Anopheles gambiae ammonium transport... 23 7.0
AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical prot... 23 9.3
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 26.6 bits (56), Expect = 0.76
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = -2
Query: 700 FVKGGEPFCTDCNINQSERNHTNTCTRKK 614
F GG P+ DCN+N ++++ ++ T+ +
Sbjct: 674 FYIGGNPYQCDCNLNWLQKSNIDSRTQPR 702
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 26.2 bits (55), Expect = 1.00
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 551 TLAEWLQQSSGRHHATRNRAHRVSRACSA 465
T AE QQ+ HH T +A R + C+A
Sbjct: 578 TGAEKQQQNRSNHHRTTEQADREASVCAA 606
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 26.2 bits (55), Expect = 1.00
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -2
Query: 700 FVKGGEPFCTDCNINQSER-NHTNT 629
F GG PF DCNI+ ++ NH +
Sbjct: 709 FYIGGNPFVCDCNIDWLQKINHVTS 733
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 25.4 bits (53), Expect = 1.7
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -1
Query: 197 RHHTRRASGERSRRSLSSVAPCRAGYRLAFGSRRR 93
R +R SG SR S + RAG R GSR R
Sbjct: 1064 RSRSRSRSGSGSRSRSRSGSGSRAGSRAGSGSRSR 1098
>AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein
protein.
Length = 468
Score = 25.4 bits (53), Expect = 1.7
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -2
Query: 670 DCNINQSERNHTNTCTRKKANGSAPKSCPAAQAAPAPNGIHSLSGSSRVV 521
DC+ S NH+N C R +G +C A + G H + GS++ V
Sbjct: 418 DCH---SPVNHSNVCIRCGTSGHLAATCEAEVRCASCAGPHRM-GSAQCV 463
>AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein
protein.
Length = 455
Score = 24.6 bits (51), Expect = 3.0
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -2
Query: 655 QSERNHTNTCTRKKANGSAPKSCPAAQAAPAPNGIHSL 542
QS + C R A+G KSC + A NG H +
Sbjct: 404 QSPVDRQQACIRCGADGHYAKSCTSEIKCAACNGPHRI 441
>AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein.
Length = 786
Score = 24.2 bits (50), Expect = 4.0
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 191 DAEGFAAVYEKVYFGTSQARMSSEPIFSASIVTSACRP*SGVALSRKQEDL 343
DAE AAV E V +A + P S++ V + R +GV +R E++
Sbjct: 644 DAEAGAAVPEAVLDAIPEAMPEAVPEVSSTPVRRSQRATAGVPPARYDEEV 694
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 23.8 bits (49), Expect = 5.3
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 535 SHSASVCRWAQEPPGLQDSSLEQSHW 612
+HSAS R E PGL +SSL + W
Sbjct: 997 THSASPNRL--ESPGLNESSLSPNLW 1020
>CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein.
Length = 659
Score = 23.4 bits (48), Expect = 7.0
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 222 KYTSERHRRECPRSRFSRHQLSR 290
KY S RH R R S+H+ R
Sbjct: 627 KYGSSRHSDSSSRHRSSKHERDR 649
>AJ439060-8|CAD27759.1| 808|Anopheles gambiae putative V-ATPase
protein.
Length = 808
Score = 23.4 bits (48), Expect = 7.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 186 RMMPKDLLLFTRKYTSERHRRE 251
R + D+ +F RKYTSE R E
Sbjct: 38 RDLNTDINMFQRKYTSEIRRCE 59
>AF510719-1|AAP47148.1| 591|Anopheles gambiae ammonium
transport-like protein protein.
Length = 591
Score = 23.4 bits (48), Expect = 7.0
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -2
Query: 613 ANGSAPKSCPAAQAAPAPNGIHSLS-GSSRVVAG 515
ANG+ S AA P+P SL+ +S V+ G
Sbjct: 2 ANGTTMGSPGAASTTPSPGAFQSLARNNSYVIPG 35
>AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical protein
protein.
Length = 257
Score = 23.0 bits (47), Expect = 9.3
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 4/32 (12%)
Frame = -2
Query: 628 CTRKKANGSAPKSCPAAQA----APAPNGIHS 545
C+RK + +PK PA Q+ P P HS
Sbjct: 42 CSRKCSRNGSPKFAPAVQSKNRMPPVPPPKHS 73
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 735,600
Number of Sequences: 2352
Number of extensions: 15064
Number of successful extensions: 36
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -