Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0235.Seq
(701 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 26 0.40
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 26 0.40
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 3.7
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 3.7
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 3.7
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 3.7
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 6.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 6.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 6.5
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 8.6
AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein. 21 8.6
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.8 bits (54), Expect = 0.40
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 224 VYFGTSQARMSSEPIFSASIVTSACRP*SGVA 319
V+ GT + +S E I +A+ V +AC+ +GVA
Sbjct: 20 VHCGTRPSFVSDEMIATAASVVNACQTQTGVA 51
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 25.8 bits (54), Expect = 0.40
Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
Frame = +3
Query: 162 RSFTRCPSRMMPKDLLLFTRKYTSERHRRE-CPRSRFSRHQLSRRHVDLDPALRYRGSRR 338
RS +R SR KD E+H RE R R+SR + R YR R
Sbjct: 251 RSCSRDRSREYKKDRRYDQLHNVEEKHLRERTSRRRYSRSR-EREQKSYKNEREYREYRE 309
Query: 339 TCRVRGLSR 365
T R R R
Sbjct: 310 TSRERSRDR 318
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/27 (33%), Positives = 11/27 (40%)
Frame = -2
Query: 676 CTDCNINQSERNHTNTCTRKKANGSAP 596
CT+C N TN CT + P
Sbjct: 427 CTNCGPNPCTHTTTNGCTAELRKKEPP 453
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/27 (33%), Positives = 11/27 (40%)
Frame = -2
Query: 676 CTDCNINQSERNHTNTCTRKKANGSAP 596
CT+C N TN CT + P
Sbjct: 413 CTNCGPNPCTHTTTNGCTAELRKKEPP 439
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/27 (33%), Positives = 11/27 (40%)
Frame = -2
Query: 676 CTDCNINQSERNHTNTCTRKKANGSAP 596
CT+C N TN CT + P
Sbjct: 447 CTNCGPNPCTHTTTNGCTAELRKKEPP 473
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/27 (33%), Positives = 11/27 (40%)
Frame = -2
Query: 676 CTDCNINQSERNHTNTCTRKKANGSAP 596
CT+C N TN CT + P
Sbjct: 396 CTNCGPNPCTHTTTNGCTAELRKKEPP 422
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/32 (21%), Positives = 16/32 (50%)
Frame = -1
Query: 551 TLAEWLQQSSGRHHATRNRAHRVSRACSAPTD 456
T+ EW+++ + + N ++ + PTD
Sbjct: 512 TIKEWIERGTTKSMEAANIMSKLPKTVRTPTD 543
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +2
Query: 563 RRSRLGCRTALWSR 604
++ +LG R++LWSR
Sbjct: 1895 KKLKLGLRSSLWSR 1908
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +2
Query: 563 RRSRLGCRTALWSR 604
++ +LG R++LWSR
Sbjct: 1891 KKLKLGLRSSLWSR 1904
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +3
Query: 282 LSRRHVDLDPALRYRGSRR 338
L R H + DP +RY R+
Sbjct: 710 LDRLHYETDPCVRYYPRRK 728
>AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein.
Length = 247
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/45 (20%), Positives = 21/45 (46%)
Frame = -2
Query: 220 LVNSSKSFGIIREGHLVNDRDVLFQVLHHVEQGIVSHSDPGVAYY 86
LVN+ +FG + + V ++V ++E ++ D + +
Sbjct: 27 LVNAKLAFGFLDNSVWADGLLVFYEVFRYLELAMIRWKDTEIGLF 71
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,951
Number of Sequences: 438
Number of extensions: 4127
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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