Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0234.Seq
(707 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P55072 Cluster: Transitional endoplasmic reticulum ATPa... 131 2e-29
UniRef50_UPI0000E4A84B Cluster: PREDICTED: similar to valosin; n... 120 4e-26
UniRef50_A4ICJ9 Cluster: Transitional endoplasmic reticulum ATPa... 103 3e-21
UniRef50_Q4Y788 Cluster: Cell division cycle protein 48 homologu... 94 3e-18
UniRef50_A0EEE7 Cluster: Chromosome undetermined scaffold_91, wh... 62 1e-08
UniRef50_Q7QWL6 Cluster: GLP_762_31096_33708; n=1; Giardia lambl... 61 3e-08
UniRef50_Q4MZM6 Cluster: Cell division cycle protein 48, putativ... 49 1e-04
UniRef50_A7AVE1 Cluster: Cell division cycle protein ATPase, put... 49 1e-04
UniRef50_A5KAB5 Cluster: Cell division cycle ATPase, putative; n... 46 0.001
UniRef50_Q4UBT9 Cluster: Cell divison cycle CDC48 homologue, put... 46 0.001
UniRef50_Q4YQQ6 Cluster: Cell division cycle ATPase, putative; n... 45 0.002
UniRef50_Q1JSD1 Cluster: Transitional endoplasmic reticulum ATPa... 42 0.015
UniRef50_Q0W6B6 Cluster: Putative cell division cycle protein 48... 38 0.32
UniRef50_Q1GSQ3 Cluster: AAA family ATPase, CDC48 subfamily; n=1... 37 0.42
UniRef50_A2FTG5 Cluster: ATPase, AAA family protein; n=1; Tricho... 37 0.42
UniRef50_Q9HPU1 Cluster: Cell division cycle protein; n=5; Eurya... 37 0.56
UniRef50_Q2FMV5 Cluster: AAA family ATPase, CDC48 subfamily; n=1... 36 0.98
UniRef50_Q58556 Cluster: Cell division cycle protein 48 homolog ... 35 1.7
UniRef50_Q9UYZ7 Cluster: ATPase of the AAA+ family; n=12; Euryar... 35 2.3
UniRef50_Q8THE2 Cluster: Cell division control protein 48; n=7; ... 35 2.3
UniRef50_Q6FXZ1 Cluster: Similar to sp|P53189 Saccharomyces cere... 34 3.9
UniRef50_Q8PZP5 Cluster: Cell division control protein; n=4; Eur... 33 5.2
UniRef50_A2SR43 Cluster: AAA family ATPase, CDC48 subfamily; n=1... 33 6.9
UniRef50_Q28VJ3 Cluster: Putative uncharacterized protein; n=1; ... 33 9.1
>UniRef50_P55072 Cluster: Transitional endoplasmic reticulum ATPase
(TER ATPase) (15S Mg(2+)- ATPase p97 subunit); n=169;
Eukaryota|Rep: Transitional endoplasmic reticulum ATPase
(TER ATPase) (15S Mg(2+)- ATPase p97 subunit) - Homo
sapiens (Human)
Length = 806
Score = 131 bits (316), Expect = 2e-29
Identities = 58/84 (69%), Positives = 66/84 (78%)
Frame = +2
Query: 257 KIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFM 436
KIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEVYLKPYF+
Sbjct: 81 KIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFL 140
Query: 437 EAYRPIHRDDTFMVRGGMRAVEFK 508
EAYRPI + D F+VRGGMRAVEFK
Sbjct: 141 EAYRPIRKGDIFLVRGGMRAVEFK 164
Score = 123 bits (297), Expect = 4e-27
Identities = 58/78 (74%), Positives = 71/78 (91%)
Frame = +3
Query: 27 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 206
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 207 RKETVCIVLSDDNCPDRK 260
R+E VCIVLSDD C D K
Sbjct: 64 RREAVCIVLSDDTCSDEK 81
Score = 120 bits (288), Expect = 5e-26
Identities = 53/67 (79%), Positives = 60/67 (89%)
Frame = +1
Query: 481 GGHARRRVQMVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQ 660
GG ++VETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRKQLAQ
Sbjct: 156 GGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQ 215
Query: 661 IKEMVEV 681
IKEMVE+
Sbjct: 216 IKEMVEL 222
>UniRef50_UPI0000E4A84B Cluster: PREDICTED: similar to valosin; n=3;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
valosin - Strongylocentrotus purpuratus
Length = 596
Score = 120 bits (289), Expect = 4e-26
Identities = 57/79 (72%), Positives = 71/79 (89%)
Frame = +3
Query: 24 MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGK 203
MA+N S DD++TAILR K +PNRL+VEEA++DDNSVV+LSQAKM++LQLFRGDTV+LKGK
Sbjct: 1 MAEN-SGDDIATAILRTKAKPNRLVVEEAINDDNSVVSLSQAKMDELQLFRGDTVMLKGK 59
Query: 204 RRKETVCIVLSDDNCPDRK 260
+R++TVCIVLSDD D K
Sbjct: 60 KRRDTVCIVLSDDTVTDDK 78
Score = 104 bits (250), Expect = 2e-21
Identities = 46/67 (68%), Positives = 55/67 (82%)
Frame = +1
Query: 481 GGHARRRVQMVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQ 660
GG ++VETDP P+CIV+PDTVIH +G+ IKRE+EEE LN +GYDDIGGCRKQLA
Sbjct: 126 GGMRAVEFKVVETDPGPYCIVSPDTVIHFEGDAIKREDEEENLNEIGYDDIGGCRKQLAS 185
Query: 661 IKEMVEV 681
IKEMVE+
Sbjct: 186 IKEMVEL 192
Score = 65.3 bits (152), Expect = 1e-09
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +2
Query: 401 NLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFK 508
NLF+VYL+PYF EAYRP+ + D F +RGGMRAVEFK
Sbjct: 99 NLFDVYLRPYFQEAYRPVRKGDIFQIRGGMRAVEFK 134
>UniRef50_A4ICJ9 Cluster: Transitional endoplasmic reticulum ATPase,
putative; n=2; Leishmania|Rep: Transitional endoplasmic
reticulum ATPase, putative - Leishmania infantum
Length = 690
Score = 103 bits (248), Expect = 3e-21
Identities = 45/84 (53%), Positives = 58/84 (69%)
Frame = +2
Query: 257 KIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFM 436
KI+M D + I PC V YG RVH+LPIDD+VE LTG+LFE +LKPYF+
Sbjct: 72 KIKMNKVARRNIRIHLGDTIRIVPCKDVPYGNRVHLLPIDDTVENLTGDLFENFLKPYFL 131
Query: 437 EAYRPIHRDDTFMVRGGMRAVEFK 508
E+YRP+ + D+F+ RG MR+VEFK
Sbjct: 132 ESYRPVKKGDSFVCRGAMRSVEFK 155
Score = 83.4 bits (197), Expect = 5e-15
Identities = 36/62 (58%), Positives = 48/62 (77%)
Frame = +3
Query: 75 KDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPD 254
K + N+LIVEE +DDNSVV+L+ +ME+L +FRGDTVL+KGK+ + TVCI + DD CP
Sbjct: 11 KVKLNKLIVEEPYNDDNSVVSLNPKRMEELNIFRGDTVLVKGKKHRSTVCIAMEDDECPP 70
Query: 255 RK 260
K
Sbjct: 71 EK 72
Score = 64.1 bits (149), Expect = 3e-09
Identities = 27/43 (62%), Positives = 36/43 (83%)
Frame = +1
Query: 505 QMVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDI 633
++VE DP +CIV+PDT+IH +G+PI R E+EEAL+ VGYDDI
Sbjct: 155 KVVEVDPGDYCIVSPDTIIHSEGDPIHR-EDEEALDGVGYDDI 196
>UniRef50_Q4Y788 Cluster: Cell division cycle protein 48 homologue,
putative; n=4; Plasmodium|Rep: Cell division cycle
protein 48 homologue, putative - Plasmodium chabaudi
Length = 250
Score = 93.9 bits (223), Expect = 3e-18
Identities = 40/85 (47%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 KIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGN-LFEVYLKPYF 433
KIR+ D+V + CP + YGK++ +LPIDD++EGL + LFE++LKPYF
Sbjct: 82 KIRINKVARKNLRVCLGDIVYVKACPEIPYGKKIQVLPIDDTIEGLAKDTLFEIFLKPYF 141
Query: 434 MEAYRPIHRDDTFMVRGGMRAVEFK 508
E+YRP+ + D F+VRGG +VEFK
Sbjct: 142 NESYRPVKKGDLFLVRGGFMSVEFK 166
Score = 92.7 bits (220), Expect = 8e-18
Identities = 40/67 (59%), Positives = 55/67 (82%)
Frame = +1
Query: 481 GGHARRRVQMVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQ 660
GG ++VE DP FCIV+PDTVI+ +G+PIKR++EE+ L+ +GYDDIGGC+KQLAQ
Sbjct: 158 GGFMSVEFKVVEVDPDDFCIVSPDTVIYYEGDPIKRDDEEK-LDEIGYDDIGGCKKQLAQ 216
Query: 661 IKEMVEV 681
I+EM+E+
Sbjct: 217 IREMIEL 223
Score = 83.0 bits (196), Expect = 7e-15
Identities = 39/77 (50%), Positives = 55/77 (71%)
Frame = +3
Query: 30 DNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRR 209
D K+ D + L +K RLIVEEA +DDNSVVAL+ +ME+L FRGDT+L+KGK+R
Sbjct: 6 DTKTLGDDNNGKLPKKKNLCRLIVEEATNDDNSVVALNTKRMEELNFFRGDTILIKGKKR 65
Query: 210 KETVCIVLSDDNCPDRK 260
T+CI+L+D++ + K
Sbjct: 66 HSTICIILNDNDLDEGK 82
>UniRef50_A0EEE7 Cluster: Chromosome undetermined scaffold_91, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_91,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 772
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/51 (56%), Positives = 40/51 (78%)
Frame = +3
Query: 87 NRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSD 239
NRL+V E+ +DDNSVV L Q K+ +L+LF+GD VLL+GK K+TV I +S+
Sbjct: 17 NRLMVCESTADDNSVVQLCQDKLNELKLFKGDMVLLEGKNNKKTVAIAISN 67
Score = 59.7 bits (138), Expect = 7e-08
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +2
Query: 308 DVVSIAPCPSVKYGKRVHILPIDDSVEGLTG-NLFEVYLKPYFMEAYRPIHRDDTFMVRG 484
D ++I P S+ +VHILP DS+ G NL + YL PYF++AYRP+ + D F+V+
Sbjct: 90 DFITIQPTASLPQLTKVHILPFQDSISGTNEKNLTQNYLIPYFLDAYRPVSKGDCFVVKM 149
Query: 485 GMRAVEFK 508
+ +EFK
Sbjct: 150 A-KEIEFK 156
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Frame = +1
Query: 505 QMVETDPSPFCIVAPDTVIHCDGEPIKREEE--EEALNAVGYDDIGGCRKQLAQIKEMVE 678
+++ T+P +V P T+++ +G +KRE E E+ N GY +IGG KQL IK +VE
Sbjct: 156 KIIATEPEDMGVVGPITILYTEGGTVKREIENKEQFDNQNGYANIGGMNKQLTIIKTIVE 215
Query: 679 V 681
+
Sbjct: 216 L 216
>UniRef50_Q7QWL6 Cluster: GLP_762_31096_33708; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_762_31096_33708 - Giardia lamblia
ATCC 50803
Length = 870
Score = 60.9 bits (141), Expect = 3e-08
Identities = 28/59 (47%), Positives = 37/59 (62%)
Frame = +1
Query: 505 QMVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVEV 681
++V TDPSP CIV I +GEPI R+E E VGY D+GG K+L I+E +E+
Sbjct: 179 KVVLTDPSPACIVMDGGEIFYEGEPIDRDEHERENTKVGYSDLGGLGKELGMIREQIEL 237
Score = 40.7 bits (91), Expect = 0.034
Identities = 22/53 (41%), Positives = 31/53 (58%)
Frame = +3
Query: 87 NRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDN 245
NR IV + D+S + LS K+ L LF+GD V LKG+ K T +V S ++
Sbjct: 12 NRFIVNDNPGGDDSQIILSSEKVNVLDLFQGDYVRLKGRFGKTTHAMVQSRED 64
Score = 33.1 bits (72), Expect = 6.9
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 23/80 (28%)
Frame = +2
Query: 308 DVVSIAPCPSVKYGKRVHILPIDDSVEGL-----------------------TGNLFEVY 418
D+V + P ++ Y KR+ ++P + +EGL T +LF++
Sbjct: 86 DIVILYPAQNLPYHKRIKVIPFEQDLEGLNIAGYTVKQGEDGKPAPAPFPGPTYDLFDIC 145
Query: 419 LKPYFMEAYRPIHRDDTFMV 478
+ PYF + RP+ +TF V
Sbjct: 146 IAPYFKDKCRPVTEGNTFKV 165
>UniRef50_Q4MZM6 Cluster: Cell division cycle protein 48, putative;
n=1; Theileria parva|Rep: Cell division cycle protein
48, putative - Theileria parva
Length = 954
Score = 48.8 bits (111), Expect = 1e-04
Identities = 19/48 (39%), Positives = 33/48 (68%)
Frame = +1
Query: 538 IVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVEV 681
++ ++VI G + RE +++ VGYDDIGG KQL++I+E++E+
Sbjct: 336 LIVGESVIDSSGNYLTRENHDDSYGEVGYDDIGGMNKQLSKIRELIEL 383
Score = 32.7 bits (71), Expect = 9.1
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 117 DDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVC 224
+ N V + +A+ +L + GD + +KG+RRK TVC
Sbjct: 154 NSNVNVRIGKAQANKLSVMPGDLLKVKGRRRKVTVC 189
>UniRef50_A7AVE1 Cluster: Cell division cycle protein ATPase,
putative; n=1; Babesia bovis|Rep: Cell division cycle
protein ATPase, putative - Babesia bovis
Length = 922
Score = 48.8 bits (111), Expect = 1e-04
Identities = 17/48 (35%), Positives = 35/48 (72%)
Frame = +1
Query: 538 IVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVEV 681
+++ ++V+ C G + RE+ + + +GYD+IGG KQL++I+E++E+
Sbjct: 332 LISGESVLDCSGPSLTREQHDASYGELGYDEIGGMDKQLSKIRELIEL 379
Score = 36.7 bits (81), Expect = 0.56
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +3
Query: 84 PNRLIVEEAVSDDNSVVALSQAK--MEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDR 257
PN L V V D NS + + K +L + G+ V ++GK+R +TVC+V D N D
Sbjct: 133 PN-LFVLSGVFDGNSSIEIRMGKEPANKLGVAEGNLVRVRGKKRCDTVCVVGIDPNITDN 191
Query: 258 K 260
+
Sbjct: 192 Q 192
>UniRef50_A5KAB5 Cluster: Cell division cycle ATPase, putative; n=1;
Plasmodium vivax|Rep: Cell division cycle ATPase,
putative - Plasmodium vivax
Length = 1089
Score = 46.0 bits (104), Expect = 0.001
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +3
Query: 84 PNRLIVEEAVSD-DNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSD 239
P+ +VE DN + LS+AKME+L L G TVLLKGK++KE + I D
Sbjct: 270 PSYCLVENVDEQIDNCEIYLSKAKMEELNLSEGFTVLLKGKKKKEMLAIAKLD 322
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/47 (38%), Positives = 32/47 (68%)
Frame = +1
Query: 541 VAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVEV 681
V + +I D E + RE+ EE + + Y+D+GG +KQL +I+E++E+
Sbjct: 448 VGDNAIITLDEEYLNREDYEEHTDDITYEDLGGMKKQLNKIRELIEL 494
>UniRef50_Q4UBT9 Cluster: Cell divison cycle CDC48 homologue,
putative or transitional endoplasmic reticulum ATPase,
putative; n=1; Theileria annulata|Rep: Cell divison
cycle CDC48 homologue, putative or transitional
endoplasmic reticulum ATPase, putative - Theileria
annulata
Length = 905
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/48 (39%), Positives = 34/48 (70%)
Frame = +1
Query: 538 IVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVEV 681
++ ++VI G + RE+++ + VGYDDIGG KQL++I+E++E+
Sbjct: 312 LIVGESVIDSGGNYLSREDDD-SFGEVGYDDIGGMNKQLSKIRELIEL 358
>UniRef50_Q4YQQ6 Cluster: Cell division cycle ATPase, putative; n=3;
Plasmodium (Vinckeia)|Rep: Cell division cycle ATPase,
putative - Plasmodium berghei
Length = 932
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Frame = +3
Query: 84 PNRLIVEEAVSD-DNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDD 242
PN +VE + DN + +S+ KM++L + G TVLLKGK++KE V IV D+
Sbjct: 101 PNYCLVENIDENADNFDIYMSKEKMKELNINDGFTVLLKGKKKKEMVAIVREDN 154
Score = 39.5 bits (88), Expect = 0.079
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 305 SDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEV-YLKPYFMEAYRPIHRDDTFMVR 481
+D++ I P ++K K V + P +D+V +T E L Y +Y+P+ D+T +
Sbjct: 176 NDIIKIYPLSNIKNIKNVILSPFNDTVNNITKQEIEKEILNTYLKNSYKPLSVDNTIYIN 235
Query: 482 GGMRAVEFKWSKQI 523
+ +E K K I
Sbjct: 236 YKNKRIELKVLKLI 249
Score = 38.7 bits (86), Expect = 0.14
Identities = 14/34 (41%), Positives = 26/34 (76%)
Frame = +1
Query: 580 IKREEEEEALNAVGYDDIGGCRKQLAQIKEMVEV 681
+ RE+ EE + + Y+D+GG +KQL +I+E++E+
Sbjct: 274 LNREDYEENTDDINYEDLGGMKKQLNKIRELIEL 307
>UniRef50_Q1JSD1 Cluster: Transitional endoplasmic reticulum ATPase;
n=1; Toxoplasma gondii|Rep: Transitional endoplasmic
reticulum ATPase - Toxoplasma gondii
Length = 792
Score = 41.9 bits (94), Expect = 0.015
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)
Frame = +1
Query: 472 HGPGGHARRRVQMVETD---PSPFCIVAPDTVIHCDGEPIKR----------EEEEEALN 612
HG G +V ++TD +V T + C+GEP+ R + +A +
Sbjct: 136 HGATGKVEVKVMQIDTDGKDDQEVALVDDATELICEGEPLDRAVIFCVAPLPSAQFDASS 195
Query: 613 AVGYDDIGGCRKQLAQIKEMVEV 681
+ YDD+GG +K+L I+E+VE+
Sbjct: 196 MITYDDVGGLKKELNLIRELVEL 218
Score = 36.7 bits (81), Expect = 0.56
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +3
Query: 153 MEQLQLFRGDTVLLKGKRRKETVCIVLSD 239
M LQ+ RGD VLL G+R++ETV I + D
Sbjct: 1 MAALQVQRGDVVLLSGRRKRETVAIAMPD 29
>UniRef50_Q0W6B6 Cluster: Putative cell division cycle protein 48;
n=1; uncultured methanogenic archaeon RC-I|Rep: Putative
cell division cycle protein 48 - Uncultured methanogenic
archaeon RC-I
Length = 942
Score = 37.5 bits (83), Expect = 0.32
Identities = 16/58 (27%), Positives = 34/58 (58%)
Frame = +1
Query: 508 MVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVEV 681
+ T P+ I T + +P++ E+ E+ + + Y+DIGG R+++ ++EM+E+
Sbjct: 144 VTNTRPAGTVIADMSTEVTISEKPVEAEKAEKTPH-ISYEDIGGLRREIGLVREMIEL 200
>UniRef50_Q1GSQ3 Cluster: AAA family ATPase, CDC48 subfamily; n=15;
cellular organisms|Rep: AAA family ATPase, CDC48
subfamily - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 773
Score = 37.1 bits (82), Expect = 0.42
Identities = 24/87 (27%), Positives = 41/87 (47%)
Frame = +1
Query: 421 EAVLHGGLPSDPS*RHLHGPGGHARRRVQMVETDPSPFCIVAPDTVIHCDGEPIKREEEE 600
+ V G +P P R + +A V+++ SP +V D + P +E +
Sbjct: 141 QRVSAGDMP--PQLRQMLNAPAYALAEVRLLVVSASPKGVVTIDENTEVELLPEYQEPHD 198
Query: 601 EALNAVGYDDIGGCRKQLAQIKEMVEV 681
V YDD+GG + + Q++EMVE+
Sbjct: 199 ARRTDVTYDDLGGLGETIDQLREMVEL 225
>UniRef50_A2FTG5 Cluster: ATPase, AAA family protein; n=1;
Trichomonas vaginalis G3|Rep: ATPase, AAA family protein
- Trichomonas vaginalis G3
Length = 1041
Score = 37.1 bits (82), Expect = 0.42
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +1
Query: 505 QMVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVE 678
++V P I+ VI +PI RE + V YD IGG KQ+ QI++++E
Sbjct: 145 KVVNCSPEEEVIIQDKEVILYRNQPIHRENIN--FSTVSYDSIGGLHKQIDQIRKLIE 200
>UniRef50_Q9HPU1 Cluster: Cell division cycle protein; n=5;
Euryarchaeota|Rep: Cell division cycle protein -
Halobacterium salinarium (Halobacterium halobium)
Length = 759
Score = 36.7 bits (81), Expect = 0.56
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Frame = +1
Query: 502 VQMVETDPSPFCIVAPDTVIHCDGEPIKR--------EEEEEALNAVGYDDIGGCRKQLA 657
V++ ET+PS +V+ DT I P + E + V Y+DIGG +L
Sbjct: 147 VKIAETEPSGTVVVSNDTEIQLSERPAEEIAPGAGEAAETGDPTPNVTYEDIGGLDGELE 206
Query: 658 QIKEMVEV 681
Q++EM+E+
Sbjct: 207 QVREMIEL 214
>UniRef50_Q2FMV5 Cluster: AAA family ATPase, CDC48 subfamily; n=1;
Methanospirillum hungatei JF-1|Rep: AAA family ATPase,
CDC48 subfamily - Methanospirillum hungatei (strain JF-1
/ DSM 864)
Length = 801
Score = 35.9 bits (79), Expect = 0.98
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +1
Query: 520 DPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVEV 681
+P +V T + + P + EE++ ++ Y+DIGG ++++ I+EMVE+
Sbjct: 147 EPRGTGVVTFTTEVILNDTPYQTEEKKSEELSIHYEDIGGLSREISLIREMVEI 200
>UniRef50_Q58556 Cluster: Cell division cycle protein 48 homolog
MJ1156; n=64; cellular organisms|Rep: Cell division
cycle protein 48 homolog MJ1156 - Methanococcus
jannaschii
Length = 903
Score = 35.1 bits (77), Expect = 1.7
Identities = 18/58 (31%), Positives = 34/58 (58%)
Frame = +1
Query: 508 MVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVEV 681
+V T P+ V T + EP+ E +E + V Y+DIGG ++++ +++EM+E+
Sbjct: 141 VVSTTPAGPVRVTDFTHVELKEEPVS-EIKETKVPDVTYEDIGGLKEEVKKVREMIEL 197
>UniRef50_Q9UYZ7 Cluster: ATPase of the AAA+ family; n=12;
Euryarchaeota|Rep: ATPase of the AAA+ family -
Pyrococcus abyssi
Length = 840
Score = 34.7 bits (76), Expect = 2.3
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +1
Query: 484 GHARRRVQMVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQI 663
G + +V T P + +T + + + E EE + V Y+DIGG ++ + +I
Sbjct: 167 GFGELKFMVVNTIPKGIVQITYNTEVEVLPQAV--EVREEKIPEVTYEDIGGLKEAIEKI 224
Query: 664 KEMVEV 681
+EMVE+
Sbjct: 225 REMVEL 230
>UniRef50_Q8THE2 Cluster: Cell division control protein 48; n=7;
cellular organisms|Rep: Cell division control protein 48
- Methanosarcina acetivorans
Length = 753
Score = 34.7 bits (76), Expect = 2.3
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +1
Query: 508 MVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVEV 681
+ T P+ +V DT I + I EE + + Y+DIGG R+++ ++EM+E+
Sbjct: 140 VASTRPAGPVVVTKDTEIVIKEKSI---EEIKTPEGISYEDIGGLRREIQLVREMIEL 194
>UniRef50_Q6FXZ1 Cluster: Similar to sp|P53189 Saccharomyces
cerevisiae YGL028c SCW11; n=1; Candida glabrata|Rep:
Similar to sp|P53189 Saccharomyces cerevisiae YGL028c
SCW11 - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 592
Score = 33.9 bits (74), Expect = 3.9
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +1
Query: 64 SSVARTDPTVSLSKKQSAMTTQSWHFHRPKW-SNFNSSVVTQSCSKA-NAARKPFASCSQ 237
SSV+ TV+ SK SA +T + +W +++ ++ T S S N+A K +S S+
Sbjct: 251 SSVSSVSNTVTFSKSSSAESTSTTTITTTEWDTSYTTTFTTISGSSGINSATKTVSSSSK 310
Query: 238 MIIALIENSDEPCREKQPS 294
+ NSD P PS
Sbjct: 311 -----VSNSDSPTSSTSPS 324
>UniRef50_Q8PZP5 Cluster: Cell division control protein; n=4;
Euryarchaeota|Rep: Cell division control protein -
Methanosarcina mazei (Methanosarcina frisia)
Length = 792
Score = 33.5 bits (73), Expect = 5.2
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 511 VETDPSPFCIVAPDTV-IHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVEV 681
VETDP+ ++ +T I +P++ E+ Y+DIGG ++ +++EM+E+
Sbjct: 160 VETDPANTIVLITETTNIELRKKPVQGYEKATR-GVTTYEDIGGLGDEIMRVREMIEM 216
>UniRef50_A2SR43 Cluster: AAA family ATPase, CDC48 subfamily; n=1;
Methanocorpusculum labreanum Z|Rep: AAA family ATPase,
CDC48 subfamily - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 826
Score = 33.1 bits (72), Expect = 6.9
Identities = 11/31 (35%), Positives = 23/31 (74%)
Frame = +1
Query: 589 EEEEEALNAVGYDDIGGCRKQLAQIKEMVEV 681
++E + A+ Y+DIGG + +L +++EM+E+
Sbjct: 167 DDEFDGTKAITYEDIGGLKGELKRVREMIEL 197
>UniRef50_Q28VJ3 Cluster: Putative uncharacterized protein; n=1;
Jannaschia sp. CCS1|Rep: Putative uncharacterized
protein - Jannaschia sp. (strain CCS1)
Length = 348
Score = 32.7 bits (71), Expect = 9.1
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 39 SPDDLST--AILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRK 212
S DL+T A++R + +P R+ + DD + + + ME L GD + L G++
Sbjct: 259 SAADLATGRAVVRDRTKPMRIFYH-LMLDDPACLLVENCPMETAHL--GDVMALGGRQIS 315
Query: 213 ETVCIVLSD 239
+ C VLSD
Sbjct: 316 QAACPVLSD 324
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,276,327
Number of Sequences: 1657284
Number of extensions: 14239737
Number of successful extensions: 39343
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 37907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39331
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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