Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0234.Seq
(707 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 131 3e-30
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 131 3e-30
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 131 3e-30
AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing prot... 131 3e-30
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 131 3e-30
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 131 3e-30
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 118 2e-26
D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of s... 31 3.1
BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome, ma... 31 3.1
AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein. 31 3.1
AB075520-1|BAE45763.1| 433|Homo sapiens putative protein produc... 31 3.1
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 131 bits (316), Expect = 3e-30
Identities = 58/84 (69%), Positives = 66/84 (78%)
Frame = +2
Query: 257 KIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFM 436
KIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEVYLKPYF+
Sbjct: 81 KIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFL 140
Query: 437 EAYRPIHRDDTFMVRGGMRAVEFK 508
EAYRPI + D F+VRGGMRAVEFK
Sbjct: 141 EAYRPIRKGDIFLVRGGMRAVEFK 164
Score = 123 bits (297), Expect = 5e-28
Identities = 58/78 (74%), Positives = 71/78 (91%)
Frame = +3
Query: 27 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 206
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 207 RKETVCIVLSDDNCPDRK 260
R+E VCIVLSDD C D K
Sbjct: 64 RREAVCIVLSDDTCSDEK 81
Score = 117 bits (281), Expect = 5e-26
Identities = 52/67 (77%), Positives = 59/67 (88%)
Frame = +1
Query: 481 GGHARRRVQMVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQ 660
GG ++VET PSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRKQLAQ
Sbjct: 156 GGMRAVEFKVVETHPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQ 215
Query: 661 IKEMVEV 681
IKEMVE+
Sbjct: 216 IKEMVEL 222
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 131 bits (316), Expect = 3e-30
Identities = 58/84 (69%), Positives = 66/84 (78%)
Frame = +2
Query: 257 KIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFM 436
KIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEVYLKPYF+
Sbjct: 81 KIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFL 140
Query: 437 EAYRPIHRDDTFMVRGGMRAVEFK 508
EAYRPI + D F+VRGGMRAVEFK
Sbjct: 141 EAYRPIRKGDIFLVRGGMRAVEFK 164
Score = 123 bits (297), Expect = 5e-28
Identities = 58/78 (74%), Positives = 71/78 (91%)
Frame = +3
Query: 27 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 206
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 207 RKETVCIVLSDDNCPDRK 260
R+E VCIVLSDD C D K
Sbjct: 64 RREAVCIVLSDDTCSDEK 81
Score = 120 bits (288), Expect = 7e-27
Identities = 53/67 (79%), Positives = 60/67 (89%)
Frame = +1
Query: 481 GGHARRRVQMVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQ 660
GG ++VETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRKQLAQ
Sbjct: 156 GGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQ 215
Query: 661 IKEMVEV 681
IKEMVE+
Sbjct: 216 IKEMVEL 222
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 131 bits (316), Expect = 3e-30
Identities = 58/84 (69%), Positives = 66/84 (78%)
Frame = +2
Query: 257 KIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFM 436
KIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEVYLKPYF+
Sbjct: 81 KIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFL 140
Query: 437 EAYRPIHRDDTFMVRGGMRAVEFK 508
EAYRPI + D F+VRGGMRAVEFK
Sbjct: 141 EAYRPIRKGDIFLVRGGMRAVEFK 164
Score = 123 bits (297), Expect = 5e-28
Identities = 58/78 (74%), Positives = 71/78 (91%)
Frame = +3
Query: 27 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 206
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 207 RKETVCIVLSDDNCPDRK 260
R+E VCIVLSDD C D K
Sbjct: 64 RREAVCIVLSDDTCSDEK 81
Score = 120 bits (288), Expect = 7e-27
Identities = 53/67 (79%), Positives = 60/67 (89%)
Frame = +1
Query: 481 GGHARRRVQMVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQ 660
GG ++VETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRKQLAQ
Sbjct: 156 GGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQ 215
Query: 661 IKEMVEV 681
IKEMVE+
Sbjct: 216 IKEMVEL 222
>AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing protein
protein.
Length = 307
Score = 131 bits (316), Expect = 3e-30
Identities = 58/84 (69%), Positives = 66/84 (78%)
Frame = +2
Query: 257 KIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFM 436
KIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEVYLKPYF+
Sbjct: 19 KIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFL 78
Query: 437 EAYRPIHRDDTFMVRGGMRAVEFK 508
EAYRPI + D F+VRGGMRAVEFK
Sbjct: 79 EAYRPIRKGDIFLVRGGMRAVEFK 102
Score = 120 bits (288), Expect = 7e-27
Identities = 53/67 (79%), Positives = 60/67 (89%)
Frame = +1
Query: 481 GGHARRRVQMVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQ 660
GG ++VETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRKQLAQ
Sbjct: 94 GGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQ 153
Query: 661 IKEMVEV 681
IKEMVE+
Sbjct: 154 IKEMVEL 160
Score = 31.1 bits (67), Expect = 4.0
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 210 KETVCIVLSDDNCPDRK 260
+E VCIVLSDD C D K
Sbjct: 3 REAVCIVLSDDTCSDEK 19
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 131 bits (316), Expect = 3e-30
Identities = 58/84 (69%), Positives = 66/84 (78%)
Frame = +2
Query: 257 KIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFM 436
KIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEVYLKPYF+
Sbjct: 81 KIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFL 140
Query: 437 EAYRPIHRDDTFMVRGGMRAVEFK 508
EAYRPI + D F+VRGGMRAVEFK
Sbjct: 141 EAYRPIRKGDIFLVRGGMRAVEFK 164
Score = 123 bits (297), Expect = 5e-28
Identities = 58/78 (74%), Positives = 71/78 (91%)
Frame = +3
Query: 27 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 206
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 207 RKETVCIVLSDDNCPDRK 260
R+E VCIVLSDD C D K
Sbjct: 64 RREAVCIVLSDDTCSDEK 81
Score = 120 bits (288), Expect = 7e-27
Identities = 53/67 (79%), Positives = 60/67 (89%)
Frame = +1
Query: 481 GGHARRRVQMVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQ 660
GG ++VETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRKQLAQ
Sbjct: 156 GGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQ 215
Query: 661 IKEMVEV 681
IKEMVE+
Sbjct: 216 IKEMVEL 222
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 131 bits (316), Expect = 3e-30
Identities = 58/84 (69%), Positives = 66/84 (78%)
Frame = +2
Query: 257 KIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFM 436
KIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNLFEVYLKPYF+
Sbjct: 81 KIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFL 140
Query: 437 EAYRPIHRDDTFMVRGGMRAVEFK 508
EAYRPI + D F+VRGGMRAVEFK
Sbjct: 141 EAYRPIRKGDIFLVRGGMRAVEFK 164
Score = 123 bits (297), Expect = 5e-28
Identities = 58/78 (74%), Positives = 71/78 (91%)
Frame = +3
Query: 27 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 206
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 207 RKETVCIVLSDDNCPDRK 260
R+E VCIVLSDD C D K
Sbjct: 64 RREAVCIVLSDDTCSDEK 81
Score = 120 bits (288), Expect = 7e-27
Identities = 53/67 (79%), Positives = 60/67 (89%)
Frame = +1
Query: 481 GGHARRRVQMVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQ 660
GG ++VETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRKQLAQ
Sbjct: 156 GGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQ 215
Query: 661 IKEMVEV 681
IKEMVE+
Sbjct: 216 IKEMVEL 222
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 118 bits (284), Expect = 2e-26
Identities = 51/59 (86%), Positives = 58/59 (98%)
Frame = +1
Query: 505 QMVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVEV 681
++VETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRKQLAQIKEMVE+
Sbjct: 2 KVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVEL 60
>D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of sgv1
protein.
Length = 433
Score = 31.5 bits (68), Expect = 3.1
Identities = 10/21 (47%), Positives = 18/21 (85%)
Frame = +1
Query: 616 VGYDDIGGCRKQLAQIKEMVE 678
V Y D+GGC++Q+ +++E+VE
Sbjct: 172 VTYSDVGGCKEQIEKLREVVE 192
>BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 2 protein.
Length = 433
Score = 31.5 bits (68), Expect = 3.1
Identities = 10/21 (47%), Positives = 18/21 (85%)
Frame = +1
Query: 616 VGYDDIGGCRKQLAQIKEMVE 678
V Y D+GGC++Q+ +++E+VE
Sbjct: 172 VTYSDVGGCKEQIEKLREVVE 192
>AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein.
Length = 409
Score = 31.5 bits (68), Expect = 3.1
Identities = 10/21 (47%), Positives = 18/21 (85%)
Frame = +1
Query: 616 VGYDDIGGCRKQLAQIKEMVE 678
V Y D+GGC++Q+ +++E+VE
Sbjct: 148 VTYSDVGGCKEQIEKLREVVE 168
>AB075520-1|BAE45763.1| 433|Homo sapiens putative protein product
of Nbla10058 protein.
Length = 433
Score = 31.5 bits (68), Expect = 3.1
Identities = 10/21 (47%), Positives = 18/21 (85%)
Frame = +1
Query: 616 VGYDDIGGCRKQLAQIKEMVE 678
V Y D+GGC++Q+ +++E+VE
Sbjct: 172 VTYSDVGGCKEQIEKLREVVE 192
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,200,132
Number of Sequences: 237096
Number of extensions: 2156147
Number of successful extensions: 4942
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4942
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -