Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0234.Seq
(707 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 113 1e-25
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 107 1e-23
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 107 1e-23
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 32 0.46
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 30 1.4
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 30 1.4
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 29 3.3
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 29 3.3
Z81137-1|CAB03469.2| 503|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z68227-6|CAA92512.1| 410|Caenorhabditis elegans Hypothetical pr... 28 5.7
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 28 5.7
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 28 7.5
AL031624-2|CAA20942.1| 244|Caenorhabditis elegans Hypothetical ... 28 7.5
AF408755-1|AAO27834.1| 360|Caenorhabditis elegans unknown prote... 28 7.5
AF047651-4|AAK67208.2| 516|Caenorhabditis elegans Hypothetical ... 28 7.5
AF047651-3|AAZ82848.1| 515|Caenorhabditis elegans Hypothetical ... 28 7.5
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 28 7.5
U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer am... 27 9.9
U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer am... 27 9.9
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 27 9.9
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 113 bits (272), Expect = 1e-25
Identities = 48/84 (57%), Positives = 61/84 (72%)
Frame = +2
Query: 257 KIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFM 436
K+RM DVVSI P P++ YG R+H+LPIDD++EGLTGNLF+V+LKPYF+
Sbjct: 87 KVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRIHVLPIDDTIEGLTGNLFDVFLKPYFL 146
Query: 437 EAYRPIHRDDTFMVRGGMRAVEFK 508
EAYRP+H+ D F V+ MR VEFK
Sbjct: 147 EAYRPLHKGDIFTVQAAMRTVEFK 170
Score = 106 bits (254), Expect = 2e-23
Identities = 47/75 (62%), Positives = 65/75 (86%)
Frame = +3
Query: 36 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 215
K D+LSTAIL+ K +PNRLIV+++ DDNSV+A+SQAKM++L LFRGD V+LKGK+RKE
Sbjct: 13 KKNDELSTAILKDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKE 72
Query: 216 TVCIVLSDDNCPDRK 260
+V I++SD++CP+ K
Sbjct: 73 SVAIIVSDESCPNEK 87
Score = 100 bits (239), Expect = 1e-21
Identities = 42/59 (71%), Positives = 55/59 (93%)
Frame = +1
Query: 505 QMVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVEV 681
++VET+P+P CIV+PDT+IH +G+PIKREEEEE++N +GYDD+GG RKQLAQIKEMVE+
Sbjct: 170 KVVETEPAPACIVSPDTMIHYEGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVEL 228
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 107 bits (256), Expect = 1e-23
Identities = 48/59 (81%), Positives = 55/59 (93%)
Frame = +1
Query: 505 QMVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVEV 681
++VETDP+P CIVAPDTVIH +G+PIKREEEEEALN VGYDD+GG RKQLAQIKEMVE+
Sbjct: 169 KVVETDPAPACIVAPDTVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVEL 227
Score = 105 bits (252), Expect = 3e-23
Identities = 48/75 (64%), Positives = 65/75 (86%)
Frame = +3
Query: 36 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 215
K D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+E
Sbjct: 13 KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72
Query: 216 TVCIVLSDDNCPDRK 260
TV IVL+ DNCP+ K
Sbjct: 73 TVSIVLNADNCPNDK 87
Score = 102 bits (244), Expect = 3e-22
Identities = 46/84 (54%), Positives = 60/84 (71%)
Frame = +2
Query: 257 KIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFM 436
KI+M DVVSI+ ++YGKRVH+LPIDD++EGLTGNLF+V+L+PYF
Sbjct: 87 KIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVLPIDDTIEGLTGNLFDVFLRPYFT 145
Query: 437 EAYRPIHRDDTFMVRGGMRAVEFK 508
+AYRP+H+ D F V+ MR VEFK
Sbjct: 146 DAYRPVHKGDIFTVQAAMRTVEFK 169
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 107 bits (256), Expect = 1e-23
Identities = 48/59 (81%), Positives = 55/59 (93%)
Frame = +1
Query: 505 QMVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVEV 681
++VETDP+P CIVAPDTVIH +G+PIKREEEEEALN VGYDD+GG RKQLAQIKEMVE+
Sbjct: 169 KVVETDPAPACIVAPDTVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVEL 227
Score = 105 bits (252), Expect = 3e-23
Identities = 48/75 (64%), Positives = 65/75 (86%)
Frame = +3
Query: 36 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 215
K D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+E
Sbjct: 13 KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72
Query: 216 TVCIVLSDDNCPDRK 260
TV IVL+ DNCP+ K
Sbjct: 73 TVSIVLNADNCPNDK 87
Score = 102 bits (244), Expect = 3e-22
Identities = 46/84 (54%), Positives = 60/84 (71%)
Frame = +2
Query: 257 KIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFM 436
KI+M DVVSI+ ++YGKRVH+LPIDD++EGLTGNLF+V+L+PYF
Sbjct: 87 KIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVLPIDDTIEGLTGNLFDVFLRPYFT 145
Query: 437 EAYRPIHRDDTFMVRGGMRAVEFK 508
+AYRP+H+ D F V+ MR VEFK
Sbjct: 146 DAYRPVHKGDIFTVQAAMRTVEFK 169
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 31.9 bits (69), Expect = 0.46
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 622 YDDIGGCRKQLAQIKEMVEV 681
+DDIGGC Q+ ++KE VE+
Sbjct: 182 FDDIGGCESQIQELKESVEL 201
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 616 VGYDDIGGCRKQLAQIKEMVE 678
V Y D+GGC+ Q+ +++E+VE
Sbjct: 174 VTYSDVGGCKDQIEKLREVVE 194
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical
protein C10C6.1 protein.
Length = 1565
Score = 30.3 bits (65), Expect = 1.4
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Frame = +1
Query: 25 WQIIKVLMIYRPRSSVARTDPTVSLSKKQSAMT-TQSWHFHRPKWSNFNSSVVTQSCSKA 201
W + + R RSS+ +DP +S S S T T S H + SS T S +++
Sbjct: 56 WTSASMTNLCRVRSSLGHSDPQLSSSSTNSFNTSTSSLHPATKSSTTALSSFSTSSANRS 115
Query: 202 NAARKPFASCSQMIIALIENSDEPCREKQPSCAS 303
A R S + + ++ P R Q S +S
Sbjct: 116 PANRPSLHSSTSPV--TLQRCRSPMRVPQRSTSS 147
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 30.3 bits (65), Expect = 1.4
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Frame = +1
Query: 25 WQIIKVLMIYRPRSSVARTDPTVSLSKKQSAMT-TQSWHFHRPKWSNFNSSVVTQSCSKA 201
W + + R RSS+ +DP +S S S T T S H + SS T S +++
Sbjct: 56 WTSASMTNLCRVRSSLGHSDPQLSSSSTNSFNTSTSSLHPATKSSTTALSSFSTSSANRS 115
Query: 202 NAARKPFASCSQMIIALIENSDEPCREKQPSCAS 303
A R S + + ++ P R Q S +S
Sbjct: 116 PANRPSLHSSTSPV--TLQRCRSPMRVPQRSTSS 147
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +1
Query: 574 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVEV 681
+P+ + E + Y D+GG +Q+ +++E+VE+
Sbjct: 125 DPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVEL 160
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +1
Query: 574 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVEV 681
+P+ + E + Y D+GG +Q+ +++E+VE+
Sbjct: 133 DPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVEL 168
>Z81137-1|CAB03469.2| 503|Caenorhabditis elegans Hypothetical
protein W02D9.1 protein.
Length = 503
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/73 (24%), Positives = 35/73 (47%)
Frame = +1
Query: 463 RHLHGPGGHARRRVQMVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGC 642
R+++G G RRV + + P + + C G P + E++ +G D I
Sbjct: 371 RYMYGKEG---RRVAQTAMSCATIILRNPPSAVDCHGCPFRHSEKQVLKQKLGSDAILK- 426
Query: 643 RKQLAQIKEMVEV 681
++Q+ +I E+ E+
Sbjct: 427 KEQIERIAELAEL 439
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 517 TDPSPFCIVAPDTVIHCDGEPIKREEEEE--ALNAVGYD 627
++P+P VAP+ + E + E+EE A+ +GYD
Sbjct: 153 SNPAPAADVAPEAAAPAEAEALTDEQEENVLAITGMGYD 191
>Z68227-6|CAA92512.1| 410|Caenorhabditis elegans Hypothetical
protein F49C12.8 protein.
Length = 410
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 353 RVHILPIDDSVEGLTGNLFEVYLKPY--FMEAYRPIHRDDTFMVRGGMRAVEFKWSKQIH 526
R ++ ++ E LTG L P ++E+Y H D F+ + + FK+ + +
Sbjct: 251 RTKVIRCNEVQEQLTGGGLNGTLIPVREYLESYYDCHYDRFFIQLAALESERFKFDRYLS 310
Query: 527 HHF 535
HF
Sbjct: 311 PHF 313
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +1
Query: 172 SVVTQSCSKANAARKPFASCSQMIIALIENSDEPCREKQPSC 297
SVVT+ C K C++ + AL+E+ D E C
Sbjct: 168 SVVTRLCGKMEPTDPELGKCAESLGALLEHEDPKVSESALRC 209
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 15 LNKMADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQL 164
L K+ NK+ +DL T LR++ +++ E V+ N AK+E +
Sbjct: 61 LRKLLMNKAAEDLKTQQLRKEQERVKVLAERTVALPNVDSIDDHAKLEAI 110
>AL031624-2|CAA20942.1| 244|Caenorhabditis elegans Hypothetical
protein H16D19.3 protein.
Length = 244
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 196 KANAARKPFASCSQMIIALIENSDEPCREKQPSCASF*CGIHSS 327
++N PF++CS + + LI+ E Q SC F CG+ S
Sbjct: 72 RSNVIPCPFSTCSLLFLDLIDARFHYLLEHQ-SCQLFCCGVRFS 114
>AF408755-1|AAO27834.1| 360|Caenorhabditis elegans unknown protein
protein.
Length = 360
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = +1
Query: 412 SILEAVLHGGLPSDPS*RHLHGPGGHARRRVQMVETDPSPFCIVAPDTVIHCDGEPIKRE 591
S+ E + +PS+P + +H GH + V T + C+ P ++ DG PI
Sbjct: 162 SMPELIDSSNMPSEPPKKKIHLEVGHRNSEMVGVSTSSNAPCL--PKEIL-TDGVPI--A 216
Query: 592 EEEEALNAVGYDDIG 636
++E L A G IG
Sbjct: 217 DDEIILEADGECKIG 231
>AF047651-4|AAK67208.2| 516|Caenorhabditis elegans Hypothetical
protein C05D2.6a protein.
Length = 516
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = +1
Query: 412 SILEAVLHGGLPSDPS*RHLHGPGGHARRRVQMVETDPSPFCIVAPDTVIHCDGEPIKRE 591
S+ E + +PS+P + +H GH + V T + C+ P ++ DG PI
Sbjct: 318 SMPELIDSSNMPSEPPKKKIHLEVGHRNSEMVGVSTSSNAPCL--PKEIL-TDGVPI--A 372
Query: 592 EEEEALNAVGYDDIG 636
++E L A G IG
Sbjct: 373 DDEIILEADGECKIG 387
>AF047651-3|AAZ82848.1| 515|Caenorhabditis elegans Hypothetical
protein C05D2.6b protein.
Length = 515
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = +1
Query: 412 SILEAVLHGGLPSDPS*RHLHGPGGHARRRVQMVETDPSPFCIVAPDTVIHCDGEPIKRE 591
S+ E + +PS+P + +H GH + V T + C+ P ++ DG PI
Sbjct: 317 SMPELIDSSNMPSEPPKKKIHLEVGHRNSEMVGVSTSSNAPCL--PKEIL-TDGVPI--A 371
Query: 592 EEEEALNAVGYDDIG 636
++E L A G IG
Sbjct: 372 DDEIILEADGECKIG 386
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 15 LNKMADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQL 164
L K+ NK+ +DL T LR++ +++ E V+ N AK+E +
Sbjct: 61 LRKLLMNKAAEDLKTQQLRKEQERVKVLAERTVALPNVDSIDDHAKLEAI 110
>U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform a protein.
Length = 1212
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -2
Query: 499 DGAHAPPDHEGVVTMDR-TVSLHEVRLQVYFE 407
D PPD GVVT ++ S++ +R +V FE
Sbjct: 227 DSTFKPPDFTGVVTCEKPDKSIYTIRAKVEFE 258
>U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform b protein.
Length = 1454
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -2
Query: 499 DGAHAPPDHEGVVTMDR-TVSLHEVRLQVYFE 407
D PPD GVVT ++ S++ +R +V FE
Sbjct: 227 DSTFKPPDFTGVVTCEKPDKSIYTIRAKVEFE 258
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 556 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVEV 681
V+ D +P+ + E Y D+GG +Q+ +IKE VE+
Sbjct: 165 VLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVEL 206
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,656,642
Number of Sequences: 27780
Number of extensions: 348625
Number of successful extensions: 1059
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -