Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0233.Seq
(706 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 150 2e-36
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 150 2e-36
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 150 2e-36
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 150 2e-36
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 150 2e-36
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 46 7e-05
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 46 7e-05
BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p pro... 40 0.003
AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar pr... 40 0.003
AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA... 40 0.003
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 150 bits (363), Expect = 2e-36
Identities = 84/177 (47%), Positives = 100/177 (56%), Gaps = 1/177 (0%)
Frame = +1
Query: 139 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKLYFSVV*KCPLRSTNLPRHWT 318
N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQK K P +
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 319 RLQ-LRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQTQSPSWS 495
+ ++ F + + ++ S T +
Sbjct: 94 KTTAVKLFKLLEKYRPESALAKNVRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 496 RRRRPLVVIAHDVDPIELVLFLPALCRKMGVPY*IVKGKSRLGALVHRKTCTCLALT 666
+++ LVVIAHDVDP+ELVLFLPALCRKMGVPY IVKGK+RLG LV RKTCT LALT
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALT 210
Score = 91.1 bits (216), Expect = 1e-18
Identities = 45/86 (52%), Positives = 57/86 (66%)
Frame = +3
Query: 252 EAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXX 431
+AVLQ+RLKVPPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 72 KAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESALAKNVRLKKIAEAKAKGKD 131
Query: 432 XXXXXRPNTIRSGTNTVTKLVEKKKA 509
+P+ + +GTNTVTKL+E+KKA
Sbjct: 132 VEPKKKPSYVSAGTNTVTKLIEQKKA 157
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 150 bits (363), Expect = 2e-36
Identities = 84/177 (47%), Positives = 100/177 (56%), Gaps = 1/177 (0%)
Frame = +1
Query: 139 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKLYFSVV*KCPLRSTNLPRHWT 318
N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQK K P +
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 319 RLQ-LRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQTQSPSWS 495
+ ++ F + + ++ S T +
Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 496 RRRRPLVVIAHDVDPIELVLFLPALCRKMGVPY*IVKGKSRLGALVHRKTCTCLALT 666
+++ LVVIAHDVDP+ELVLFLPALCRKMGVPY IVKGK+RLG LV RKTCT LALT
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALT 210
Score = 91.1 bits (216), Expect = 1e-18
Identities = 45/86 (52%), Positives = 57/86 (66%)
Frame = +3
Query: 252 EAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXX 431
+AVLQ+RLKVPPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 72 KAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKD 131
Query: 432 XXXXXRPNTIRSGTNTVTKLVEKKKA 509
+P+ + +GTNTVTKL+E+KKA
Sbjct: 132 VEPKKKPSYVSAGTNTVTKLIEQKKA 157
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 150 bits (363), Expect = 2e-36
Identities = 84/177 (47%), Positives = 100/177 (56%), Gaps = 1/177 (0%)
Frame = +1
Query: 139 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKLYFSVV*KCPLRSTNLPRHWT 318
N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQK K P +
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 319 RLQ-LRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQTQSPSWS 495
+ ++ F + + ++ S T +
Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 496 RRRRPLVVIAHDVDPIELVLFLPALCRKMGVPY*IVKGKSRLGALVHRKTCTCLALT 666
+++ LVVIAHDVDP+ELVLFLPALCRKMGVPY IVKGK+RLG LV RKTCT LALT
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALT 210
Score = 91.1 bits (216), Expect = 1e-18
Identities = 45/86 (52%), Positives = 57/86 (66%)
Frame = +3
Query: 252 EAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXX 431
+AVLQ+RLKVPPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 72 KAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKD 131
Query: 432 XXXXXRPNTIRSGTNTVTKLVEKKKA 509
+P+ + +GTNTVTKL+E+KKA
Sbjct: 132 VEPKKKPSYVSAGTNTVTKLIEQKKA 157
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 150 bits (363), Expect = 2e-36
Identities = 84/177 (47%), Positives = 100/177 (56%), Gaps = 1/177 (0%)
Frame = +1
Query: 139 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKLYFSVV*KCPLRSTNLPRHWT 318
N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQK K P +
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 319 RLQ-LRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQTQSPSWS 495
+ ++ F + + ++ S T +
Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 496 RRRRPLVVIAHDVDPIELVLFLPALCRKMGVPY*IVKGKSRLGALVHRKTCTCLALT 666
+++ LVVIAHDVDP+ELVLFLPALCRKMGVPY IVKGK+RLG LV RKTCT LALT
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALT 210
Score = 91.1 bits (216), Expect = 1e-18
Identities = 45/86 (52%), Positives = 57/86 (66%)
Frame = +3
Query: 252 EAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXX 431
+AVLQ+RLKVPPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 72 KAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKD 131
Query: 432 XXXXXRPNTIRSGTNTVTKLVEKKKA 509
+P+ + +GTNTVTKL+E+KKA
Sbjct: 132 VEPKKKPSYVSAGTNTVTKLIEQKKA 157
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 150 bits (363), Expect = 2e-36
Identities = 84/177 (47%), Positives = 100/177 (56%), Gaps = 1/177 (0%)
Frame = +1
Query: 139 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKLYFSVV*KCPLRSTNLPRHWT 318
N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQK K P +
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 319 RLQ-LRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQTQSPSWS 495
+ ++ F + + ++ S T +
Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 496 RRRRPLVVIAHDVDPIELVLFLPALCRKMGVPY*IVKGKSRLGALVHRKTCTCLALT 666
+++ LVVIAHDVDP+ELVLFLPALCRKMGVPY IVKGK+RLG LV RKTCT LALT
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALT 210
Score = 91.1 bits (216), Expect = 1e-18
Identities = 45/86 (52%), Positives = 57/86 (66%)
Frame = +3
Query: 252 EAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXX 431
+AVLQ+RLKVPPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 72 KAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKD 131
Query: 432 XXXXXRPNTIRSGTNTVTKLVEKKKA 509
+P+ + +GTNTVTKL+E+KKA
Sbjct: 132 VEPKKKPSYVSAGTNTVTKLIEQKKA 157
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 45.6 bits (103), Expect = 7e-05
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 469 AQTQSPSWSRRRRPLVVIAHDVDPIELVLFLPALCRKMGVPY*IVKGKSRLGAL--VHRK 642
A + + +R +VV+A D +PIE++L LP LC VPY V+ K LG V R
Sbjct: 38 ANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRACGVSRP 97
Query: 643 TCTCLALTKCG 675
C T G
Sbjct: 98 IVACSVTTNEG 108
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 45.6 bits (103), Expect = 7e-05
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 469 AQTQSPSWSRRRRPLVVIAHDVDPIELVLFLPALCRKMGVPY*IVKGKSRLGAL--VHRK 642
A + + +R +VV+A D +PIE++L LP LC VPY V+ K LG V R
Sbjct: 38 ANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRACGVSRP 97
Query: 643 TCTCLALTKCG 675
C T G
Sbjct: 98 IVACSVTTNEG 108
>BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p
protein.
Length = 160
Score = 39.9 bits (89), Expect = 0.003
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +1
Query: 511 LVVIAHDVDPIELVLFLPALCRKMGVPY*IVKGKSRLGALVHRKTCTCLALTK 669
+ + A DV P++++ LPA+C + G+PY ++ LGA + K T L +
Sbjct: 85 ICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMGVKRGTVALLVR 137
>AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar
protein NHP2 protein.
Length = 160
Score = 39.9 bits (89), Expect = 0.003
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +1
Query: 511 LVVIAHDVDPIELVLFLPALCRKMGVPY*IVKGKSRLGALVHRKTCTCLALTK 669
+ + A DV P++++ LPA+C + G+PY ++ LGA + K T L +
Sbjct: 85 ICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMGVKRGTVALLVR 137
>AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA
protein.
Length = 160
Score = 39.9 bits (89), Expect = 0.003
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +1
Query: 511 LVVIAHDVDPIELVLFLPALCRKMGVPY*IVKGKSRLGALVHRKTCTCLALTK 669
+ + A DV P++++ LPA+C + G+PY ++ LGA + K T L +
Sbjct: 85 ICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMGVKRGTVALLVR 137
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,656,069
Number of Sequences: 53049
Number of extensions: 626976
Number of successful extensions: 2656
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2650
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -