Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0232.Seq
(748 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 193 1e-49
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 190 1e-48
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 163 1e-40
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 1e-30
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 85 8e-17
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 4e-13
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 53 3e-07
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 4e-04
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.020
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.99
SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06) 31 1.3
SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_37853| Best HMM Match : REJ (HMM E-Value=0.00025) 30 1.7
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 30 2.3
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 3.0
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 29 4.0
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 5.3
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 28 7.0
SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_17340| Best HMM Match : 7tm_3 (HMM E-Value=0) 28 7.0
SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14) 28 9.2
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 193 bits (471), Expect = 1e-49
Identities = 96/167 (57%), Positives = 113/167 (67%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVFSDGGKPKIKVAYKGEDKTFFPEEVSSM 427
P++T+FDAKRLIGRKF+D V DM HWPF V +G +PKI+V +KGE K+FFPEE+SSM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSQA*TFSESSMNPXXXXXX 607
VLTKMKETAEAYLG V +AV+TVPAY + + K P
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIA 182
Query: 608 XXXXXXXXENENVLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLG 748
NVLI++LGGGTFDVS+LTIEDGIFEVKSTAGDTHLG
Sbjct: 183 YGLDKKVGVERNVLIYDLGGGTFDVSVLTIEDGIFEVKSTAGDTHLG 229
Score = 132 bits (319), Expect = 3e-31
Identities = 63/68 (92%), Positives = 65/68 (95%), Gaps = 1/68 (1%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 243 MNP-NTQY 263
MNP NT +
Sbjct: 61 MNPENTVF 68
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 190 bits (463), Expect = 1e-48
Identities = 99/168 (58%), Positives = 117/168 (69%), Gaps = 1/168 (0%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVFSDGGKPKIKVAYKGEDKTFFPEEVSSM 427
P++TIFDAKRLIGR+++DATVQ+DMK WPF++ SD KPKI+V YKGE KTF EE+SSM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSQA*TFSESSMNPXXXXXX 607
VL KMKETAEAYLG+ V +AVITVPAY + + K P
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALA 182
Query: 608 XXXXXXXXENENVLIFELGGGTFDVSILTIEDG-IFEVKSTAGDTHLG 748
+NVLIF+LGGGTFDVSILTI+DG +FEVKSTAGDTHLG
Sbjct: 183 YGLDKSLSGEKNVLIFDLGGGTFDVSILTIDDGSLFEVKSTAGDTHLG 230
Score = 127 bits (306), Expect = 1e-29
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 243 MNP 251
+NP
Sbjct: 61 LNP 63
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 163 bits (397), Expect = 1e-40
Identities = 84/167 (50%), Positives = 110/167 (65%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVFSDGGKPKIKVAYKGEDKTFFPEEVSSM 427
P++T+FDAKRLIGR ++D +VQ D+K +PF+V KP ++V K E KTF EE+S+M
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSQA*TFSESSMNPXXXXXX 607
VLTKMKETAEAYLGK V +AV+TVPAY + + K T P
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIA 880
Query: 608 XXXXXXXXENENVLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLG 748
E +N+L+F+LGGGTFDVS+LTI++G+FEV +T GDTHLG
Sbjct: 881 YGMDKKEGE-KNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLG 926
Score = 100 bits (239), Expect = 1e-21
Identities = 48/63 (76%), Positives = 55/63 (87%), Gaps = 2/63 (3%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNP-N 254
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 255 TQY 263
T +
Sbjct: 764 TVF 766
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 130 bits (314), Expect = 1e-30
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 243 MNP 251
MNP
Sbjct: 61 MNP 63
Score = 113 bits (271), Expect = 2e-25
Identities = 63/112 (56%), Positives = 73/112 (65%), Gaps = 25/112 (22%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVFSDGGKPKIKVAYKGEDKTFFPEEV--- 418
P +TIFDAKRLIGR+F+D V+ DMKHW FEV ++ G+PK+KV YKGE KTFF EEV
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNE 122
Query: 419 ----------------------SSMVLTKMKETAEAYLGKTVQNAVITVPAY 508
SSMVL KMKETAEAYLG V +AV+TVPAY
Sbjct: 123 AGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAY 174
Score = 106 bits (254), Expect = 2e-23
Identities = 58/112 (51%), Positives = 68/112 (60%)
Frame = +2
Query: 413 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSQA*TFSESSMNPX 592
++SSMVL KMKETAEAYLG V +AV+TVPAY + + K P
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270
Query: 593 XXXXXXXXXXXXXENENVLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLG 748
+ NVLIF+LGGGTFDVS+L+IEDGIFEVKST GDTHLG
Sbjct: 271 AAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIEDGIFEVKSTHGDTHLG 322
Score = 78.6 bits (185), Expect = 5e-15
Identities = 39/43 (90%), Positives = 39/43 (90%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGER 639
NDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ER
Sbjct: 244 NDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQER 286
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1
Query: 511 NDSQRQATKDAG 546
NDSQRQATKDAG
Sbjct: 176 NDSQRQATKDAG 187
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 84.6 bits (200), Expect = 8e-17
Identities = 55/168 (32%), Positives = 81/168 (48%), Gaps = 1/168 (0%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVFSDG-GKPKIKVAYKGEDKTFFPEEVSS 424
P++TI+DAKR IG+ F + K + F V +D G V KG PEE+
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151
Query: 425 MVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSQA*TFSESSMNPXXXXX 604
V+ K++ AE L TV AV++VPA +K + ++ S A +N
Sbjct: 152 YVIKKLRTMAERNLTTTVTKAVMSVPA-EFDIKQRNATVKAASLAGITVLRVINEPTAAA 210
Query: 605 XXXXXXXXXENENVLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLG 748
NV++ +LGGGT DVS+L I+ G+F + AG+ LG
Sbjct: 211 LAYGLHKKEGVANVMVVDLGGGTLDVSLLNIQGGMFVTMAMAGNNRLG 258
Score = 66.9 bits (156), Expect = 2e-11
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Frame = +3
Query: 69 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 243 MNP-NTQY 263
+NP NT Y
Sbjct: 90 INPKNTIY 97
Score = 52.0 bits (119), Expect = 5e-07
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +1
Query: 520 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 624
QR AT A +++G+ VLR+INEPTAAA+AYGL KK
Sbjct: 184 QRNATVKAASLAGITVLRVINEPTAAALAYGLHKK 218
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 72.1 bits (169), Expect = 4e-13
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 5/171 (2%)
Frame = +2
Query: 251 QHTIFDAKRLIGRKFEDATVQADMKHWPFEVFS-DGGKPKIKVAYKGEDKTFFPEEVSSM 427
++TI KR IGRKF D VQ ++ H P++V I+V Y G+ + F PE+V +M
Sbjct: 120 KNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAM 179
Query: 428 VLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSQA*TFSESSMNP----XX 595
+ T++K TAE L V + VI+VP+Y T + + + + A MN
Sbjct: 180 LFTRLKTTAEIALKTKVTDCVISVPSY-YTDRQRRCMLDASATAGLNCLRLMNDTTAVSL 238
Query: 596 XXXXXXXXXXXXENENVLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLG 748
+ NV+ ++G + V I G +V STA + +LG
Sbjct: 239 AYGIYKQDLPTDKPRNVVFVDIGHSSLQVCITAFLKGQLKVLSTAVEPNLG 289
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 236
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +1
Query: 514 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 624
D QR+ DA +GLN LR++N+ TA ++AYG+ K+
Sbjct: 209 DRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQ 245
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 56.4 bits (130), Expect = 2e-08
Identities = 22/35 (62%), Positives = 31/35 (88%)
Frame = +2
Query: 644 VLIFELGGGTFDVSILTIEDGIFEVKSTAGDTHLG 748
+ +++LGGGTFD+SIL I+ G+FEVK+T GDT+LG
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLG 36
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/47 (51%), Positives = 36/47 (76%)
Frame = +2
Query: 368 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 508
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAH 48
Score = 50.8 bits (116), Expect = 1e-06
Identities = 35/66 (53%), Positives = 39/66 (59%), Gaps = 24/66 (36%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVL------------------------RIINEPTAAAIAYGLD 618
ND+QRQATKDAGTI+GL+VL RIINEPTAAAIAYGLD
Sbjct: 50 NDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLD 109
Query: 619 KKGTGE 636
K G+
Sbjct: 110 KARGGK 115
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +3
Query: 132 GKVEIIANDQGNRTTPSYVAFTDTERLI--GDAAKNQVAMNP-NTQYSMPNVSSDVSSKM 302
G IIAND G+R TP+ VAF+DTE+LI +V N N Q S V + + KM
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLIDKDGLPYYEVESNERNIQVSPKEVINMIYKKM 142
Query: 303 L 305
L
Sbjct: 143 L 143
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 36.7 bits (81), Expect = 0.020
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +1
Query: 511 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 615
N ++R+A A + GLNVL+I+N TA A+ YGL
Sbjct: 117 NQAERRALLRAAELVGLNVLQIMNSNTAVALNYGL 151
Score = 35.1 bits (77), Expect = 0.061
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 362 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 508
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPF 115
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.99
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +3
Query: 141 EIIANDQGNRTTPSYVAFT-DTERL 212
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06)
Length = 286
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 462 ISAKLCRM-QLSRFPRTQ*LSKTSHKR-CRYHLRLERSPNH 578
+SAKLC + LS+ R HKR C Y +++E SP H
Sbjct: 198 LSAKLCHVVTLSKIVRALQTHSHLHKRQCSYQIQIETSPAH 238
>SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 743
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 462 ISAKLCRM-QLSRFPRTQ*LSKTSHKR-CRYHLRLERSPNH 578
+SAKLC + LS+ R HKR C Y +++E SP H
Sbjct: 655 LSAKLCHVITLSKIVRALQTHSHLHKRQCSYQIQIETSPAH 695
>SB_37853| Best HMM Match : REJ (HMM E-Value=0.00025)
Length = 2182
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +1
Query: 481 ECSYHGSRVLNDSQRQATKDAG-TISGLNVLRI-INEPTAAAIAYGLDKKGTGERKC 645
ECS+ GS+V+N S+R DAG ++G++ RI +N T + G T E KC
Sbjct: 678 ECSF-GSKVINSSKRITIYDAGFQVTGISPSRIRMNTKTNITVT-GSGFVHTPEMKC 732
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 359 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQK 538
+PK K + E+ EE +M ++K LGK V+ + T ++TL + Q
Sbjct: 654 QPKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITLNSQKQM 713
Query: 539 MQ 544
Q
Sbjct: 714 SQ 715
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -2
Query: 249 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 151
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +2
Query: 644 VLIFELGGGTFDVSILTIEDGIFEVK 721
V I++LG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 9 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 95
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -2
Query: 456 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLNTSKGQCFMSACTVASSNLRP 283
S F+F ST + +S +KV+ SPL + + P+ G S C V + + P
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNVQNLSRCP 1165
>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 50 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 226
L++ N + ++ + R GY L R C R + +R + H++L R +RC
Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282
Query: 227 QEPGGDEPQHTIFDA 271
G +P++T F+A
Sbjct: 283 GTASGMDPKNTPFNA 297
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 28.3 bits (60), Expect = 7.0
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +2
Query: 650 IFELGGGTFDVSILTIEDGIFEV 718
+F+LG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1555
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVFSDGGKPKIKVAYKGEDKTFFPEEVSSM 427
P H I A R++GRK +++++D +V KP + K F P+ ++S+
Sbjct: 572 PSHEIAQAWRILGRKSSRSSLESDTLE--IKVDPKDSKPTKRNILKQVASVFDPQGLASL 629
Query: 428 VLTKMK 445
+ + K
Sbjct: 630 FVLRAK 635
>SB_17340| Best HMM Match : 7tm_3 (HMM E-Value=0)
Length = 890
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 414 SSGKKVLSSPLYATLILGLPPSLNTSK 334
S+ + LSSPLY T +PP +N +K
Sbjct: 235 SATSEELSSPLYKTFFRTIPPDVNQAK 261
>SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14)
Length = 856
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -1
Query: 259 CVLGFIATWFLAASPMRRSVSVNAT*DGVVLLPWSLAMISTFPCWKTPTQEYVVPRSIPT 80
C+L I WF P+R S + VV+ S+ ++ F C P + P +IP+
Sbjct: 107 CLLLTIERWFAVVQPLRYQASFSKR--RVVVSLISVYCVACFLCCTLPFEVSFSPENIPS 164
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,970,621
Number of Sequences: 59808
Number of extensions: 601230
Number of successful extensions: 1858
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1842
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2022185256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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