Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0230.Seq
         (316 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   4.0  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   4.0  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   4.0  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   4.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   5.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   7.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    19   9.4  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 195 YNRDHILLFHARNIQAAFLAALSTLI 272
           Y R  ILL  ++N+Q   L+ L  +I
Sbjct: 107 YERFDILLNKSKNLQFPLLSTLIIII 132


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 195 YNRDHILLFHARNIQAAFLAALSTLI 272
           Y R  ILL  ++N+Q   L+ L  +I
Sbjct: 107 YERFDILLNKSKNLQFPLLSTLIIII 132


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 266 SAQSG*KCCLNIS 228
           S+Q G K CLN+S
Sbjct: 32  SSQKGQKTCLNLS 44


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 195 YNRDHILLFHARNIQAAFLAALSTLI 272
           Y R  ILL  ++N+Q   L+ L  +I
Sbjct: 107 YERFDILLNKSKNLQFPLLSTLIIII 132


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 102 DDPRISPLTSQYQ 140
           D P +SPLTS  Q
Sbjct: 909 DKPSVSPLTSPRQ 921


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 279 LNKLECSKRLKMLLEYFVHGIIEYDLG 199
           L+ L+ ++  K LLE      + Y+LG
Sbjct: 387 LSLLQVAQIFKNLLENHYEEFVRYELG 413


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 137 VLRR*R*NSWIVARRTSG 84
           +  R R   WIV R TSG
Sbjct: 909 ICNRIRNQRWIVNRDTSG 926


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,255
Number of Sequences: 336
Number of extensions: 1381
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5836655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)