Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0230.Seq
         (316 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   1.5  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   4.7  
AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          22   4.7  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            22   6.2  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 118 EILGSSQDEHQGKYLRKVFSSIK 50
           +++ S  D  QG+ LRK+ + IK
Sbjct: 698 DLVASGDDSRQGEMLRKLLALIK 720


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 291  DNFTLNKLECSKRLKMLLE 235
            D F +NK++  K +KM+L+
Sbjct: 2885 DKFVINKMDKIKDMKMVLK 2903



 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 230 KYSSSIFSRFEH 265
           K SSS+F RF+H
Sbjct: 891 KSSSSLFDRFDH 902



 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -2

Query: 243 LLEYFVHGIIEYD 205
           L+ +F HG + YD
Sbjct: 852 LIHFFTHGFLTYD 864


>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 113 SWIVARRTSGKVFAKGVFINQERKLEVRR 27
           +W++  RT      KG    Q +KLE R+
Sbjct: 23  TWVMVYRTEKYQKLKGEVEKQSKKLEKRK 51


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 230 KYSSSIFSRFEH 265
           K SSS+F RF+H
Sbjct: 892 KSSSSLFDRFDH 903



 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -2

Query: 243 LLEYFVHGIIEYD 205
           L+ +F HG + YD
Sbjct: 853 LIHFFTHGFLTYD 865


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 307,191
Number of Sequences: 2352
Number of extensions: 5347
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 20748816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)