Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0228.Seq
(572 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 95 5e-20
SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 75 3e-14
SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 3e-11
SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 4e-11
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-10
SB_6621| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_8314| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 46 2e-05
SB_8138| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 46 2e-05
SB_54283| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.4e-13) 44 7e-05
SB_20979| Best HMM Match : ATP-gua_PtransN (HMM E-Value=5.6e-08) 44 7e-05
SB_47199| Best HMM Match : ATP-gua_PtransN (HMM E-Value=9.6e-15) 36 0.031
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_57048| Best HMM Match : S-antigen (HMM E-Value=3.4) 32 0.38
SB_15059| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14) 29 2.0
SB_17249| Best HMM Match : T-box (HMM E-Value=4.8e-11) 29 2.0
SB_6669| Best HMM Match : zf-C4_Topoisom (HMM E-Value=1.2) 29 2.0
SB_32465| Best HMM Match : Chromo (HMM E-Value=3.5e-16) 29 2.7
SB_50357| Best HMM Match : Toxin_8 (HMM E-Value=2.4) 28 4.7
SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_35966| Best HMM Match : CpaB (HMM E-Value=3.6) 28 4.7
SB_35368| Best HMM Match : UIM (HMM E-Value=6.3e-06) 28 4.7
SB_48991| Best HMM Match : Rad52_Rad22 (HMM E-Value=5.2e-12) 28 6.2
SB_43972| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_33669| Best HMM Match : EMP70 (HMM E-Value=3.9e-11) 28 6.2
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 6.2
SB_3503| Best HMM Match : Rad52_Rad22 (HMM E-Value=1e-24) 28 6.2
SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37) 27 8.2
SB_31879| Best HMM Match : Exo_endo_phos (HMM E-Value=1.4) 27 8.2
SB_25245| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_5521| Best HMM Match : SWIM (HMM E-Value=6.9) 27 8.2
SB_47851| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_38561| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4) 27 8.2
SB_35013| Best HMM Match : Exo_endo_phos (HMM E-Value=0.027) 27 8.2
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 27 8.2
SB_26005| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_12999| Best HMM Match : Exo_endo_phos (HMM E-Value=1.8e-10) 27 8.2
SB_6463| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13) 27 8.2
>SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 969
Score = 94.7 bits (225), Expect = 5e-20
Identities = 47/82 (57%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 VDAATLEKLEAGFSK-LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENL 188
++ A +E+ F + L+ + KSLLKKYLT +VF+SLK KKTS G+ L DCI SGV NL
Sbjct: 614 IERAAIEEAHLKFPEDLKKPEVKSLLKKYLTEDVFNSLKEKKTSRGAGLYDCINSGVVNL 673
Query: 189 DSGVGIYAPDAESYSVFAELFD 254
DSG G+YA D E Y VF ELFD
Sbjct: 674 DSGTGVYAADEECYEVFGELFD 695
Score = 93.9 bits (223), Expect = 8e-20
Identities = 47/82 (57%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 VDAATLEKLEAGFSK-LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENL 188
++ A +E F + L+ + KSL+KKYLT E+F+ LK+KKT G TL DCI SGVENL
Sbjct: 182 IEKAAVEAKRNVFPEVLKKPEVKSLMKKYLTEEMFNELKDKKTELGVTLSDCINSGVENL 241
Query: 189 DSGVGIYAPDAESYSVFAELFD 254
DSG GIYA D ESY +FA LFD
Sbjct: 242 DSGTGIYAGDEESYKLFAPLFD 263
Score = 70.9 bits (166), Expect = 7e-13
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = +2
Query: 257 IIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQ 436
IIEDYH +K + H + NLD G F+ STR+R R+L+GY P LT +
Sbjct: 697 IIEDYHAPYKLEENHKSDMDPEKVDAPNLDAEGAFIRSTRIRVARNLKGYALTPGLTRKE 756
Query: 437 YKEMEDKVSGTLSSLEGELKGTFY 508
++E KV G L+SL G+L G +Y
Sbjct: 757 RVDVESKVVGVLNSLTGDLAGKYY 780
Score = 68.9 bits (161), Expect = 3e-12
Identities = 33/84 (39%), Positives = 47/84 (55%)
Frame = +2
Query: 257 IIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQ 436
IIEDYH +K KH + +LDP G F+ STR+R R+L+GY P L++
Sbjct: 265 IIEDYHAPYKLEQKHTSDMNPEKVEAPDLDPEGSFIRSTRIRVARNLKGYALTPALSKKA 324
Query: 437 YKEMEDKVSGTLSSLEGELKGTFY 508
E+E+KV SL G+L G ++
Sbjct: 325 RLEIEEKVKNVFESLTGDLAGKYH 348
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 484 GRAQGHVLPLTGMSKETQQQLIHDHFLFK 570
G G PL GM++ET+QQL++DHFLFK
Sbjct: 341 GDLAGKYHPLDGMTEETRQQLVNDHFLFK 369
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1
Query: 484 GRAQGHVLPLTGMSKETQQQLIHDHFLFK 570
G G PL+GM + T+QQL+ DHFLFK
Sbjct: 773 GDLAGKYYPLSGMDEATRQQLVDDHFLFK 801
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 520 MSKETQQQLIHDHFLFK 570
M + T+QQL+ DHFLFK
Sbjct: 1 MDEATRQQLVDDHFLFK 17
>SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 725
Score = 75.4 bits (177), Expect = 3e-14
Identities = 37/84 (44%), Positives = 49/84 (58%)
Frame = +2
Query: 257 IIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQ 436
I+E YH +K DKH + T NLDP G F+ STR+R R+L+GY P LT +
Sbjct: 452 IVEHYHAPYKLADKHTSDMNPEKVTAPNLDPDGVFIRSTRIRVARNLKGYALTPGLTRKE 511
Query: 437 YKEMEDKVSGTLSSLEGELKGTFY 508
E+E KV+ L SL G+L G +Y
Sbjct: 512 RNEIEKKVTEVLCSLTGDLAGKYY 535
Score = 74.1 bits (174), Expect = 7e-14
Identities = 37/68 (54%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Frame = +3
Query: 12 VDAATLEKLEAGFSK-LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENL 188
++ A +EK + F + L + KSLLKKYLT E+F+SLK+KKT+ G +L DCI SGV NL
Sbjct: 342 IERAAIEKQRSVFPEALNKEECKSLLKKYLTAEMFNSLKDKKTAKGISLYDCINSGVVNL 401
Query: 189 DSGVGIYA 212
DS G+YA
Sbjct: 402 DSSCGVYA 409
Score = 47.2 bits (107), Expect = 1e-05
Identities = 38/96 (39%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
Frame = +3
Query: 9 MVDAATLEKLEAGFS-----KLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLL----- 158
M DAA EK + + K + K LLKKYLT +VFD LK KKT G
Sbjct: 8 MADAAEAEKYRSKNAYPVPLKSAKCNPKCLLKKYLTNQVFDQLKTKKTKRGDGGCSDGGG 67
Query: 159 ---DCIQSGVENLDSGVG-IYAPDAESYSVFAELFD 254
D E +D+ V + D ESY+VFA LFD
Sbjct: 68 GGGDVDDDDGEYIDADVAVVIVGDEESYTVFAPLFD 103
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 257 IIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEG--YP 409
+IEDYH+ +K D H D +LDP F+ STR+R GR L G YP
Sbjct: 105 VIEDYHSPYKLKDGHTSDMNPDRVNAPDLDPDNRFIRSTRIRVGRDLAGKYYP 157
Score = 38.3 bits (85), Expect = 0.004
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 496 GHVLPLTGMSKETQQQLIHDHFLFK 570
G PLTGM + T++QL++DHFLFK
Sbjct: 153 GKYYPLTGMDEVTREQLVNDHFLFK 177
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1
Query: 484 GRAQGHVLPLTGMSKETQQQLIHDHFLFK 570
G G PLTGM + T+Q+L+ DHFLFK
Sbjct: 528 GDLAGKYYPLTGMDEATRQKLVDDHFLFK 556
>SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 775
Score = 65.3 bits (152), Expect = 3e-11
Identities = 33/85 (38%), Positives = 50/85 (58%)
Frame = +2
Query: 254 PIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTES 433
P+IE+ H+GFKK+DKH G D ++V+S+RVR GRS+ G+ P T +
Sbjct: 124 PVIEERHSGFKKSDKHKTDLDSSKIRGGKFDE--KYVLSSRVRTGRSIRGFSLPPHCTRA 181
Query: 434 QYKEMEDKVSGTLSSLEGELKGTFY 508
+ +E+E V+ L L G+L G +Y
Sbjct: 182 ERREVERIVNDALDGLGGDLNGKYY 206
Score = 51.6 bits (118), Expect = 4e-07
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Frame = +3
Query: 78 SLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAESYSVFAE 245
+L+ K+LT ++ L++K T G TL IQ+GV+N S VG+ A D ESY FAE
Sbjct: 61 NLMAKHLTPRLYVKLRDKSTPNGYTLDQAIQTGVDNPGHPFISTVGLVAGDEESYDTFAE 120
Query: 246 LFD 254
LFD
Sbjct: 121 LFD 123
Score = 36.7 bits (81), Expect = 0.013
Identities = 17/28 (60%), Positives = 17/28 (60%)
Frame = +1
Query: 484 GRAQGHVLPLTGMSKETQQQLIHDHFLF 567
G G PL GMS QQQLI DHFLF
Sbjct: 199 GDLNGKYYPLNGMSDAQQQQLIDDHFLF 226
>SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 64.9 bits (151), Expect = 4e-11
Identities = 34/85 (40%), Positives = 48/85 (56%)
Frame = +2
Query: 254 PIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTES 433
P+IE+ HNG+KKTDKH G+ D +V+STR R GRS+ G+ P T +
Sbjct: 465 PVIEERHNGYKKTDKHVTDLNHRKLKGGSFDE--RYVLSTRCRTGRSIRGFSLPPHCTRA 522
Query: 434 QYKEMEDKVSGTLSSLEGELKGTFY 508
+ + +E V L L G+L GT+Y
Sbjct: 523 ERRSVEKVVVDALDQLGGDLSGTYY 547
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Frame = +3
Query: 84 LKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAESYSVFAELF 251
+ ++L+ ++ LK+K T G TL IQ+GV+N S VG+ A D ESY VFA+LF
Sbjct: 404 MARHLSPRLYTKLKDKVTPNGYTLDMAIQTGVDNPGHPFISTVGLVAGDEESYDVFADLF 463
Query: 252 D 254
D
Sbjct: 464 D 464
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 484 GRAQGHVLPLTGMSKETQQQLIHDHFLF 567
G G PL M+ E Q+QLI+DHFLF
Sbjct: 540 GDLSGTYYPLGKMTNEEQEQLINDHFLF 567
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/85 (40%), Positives = 50/85 (58%)
Frame = +2
Query: 254 PIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTES 433
P+IE H G+KKTDKH D G LDP ++V+S+RVR GRS+ G+ P + +
Sbjct: 2384 PVIELRHGGYKKTDKHKTDLNPDNLKGGALDP--KYVLSSRVRTGRSIRGFCLPPHCSRA 2441
Query: 434 QYKEMEDKVSGTLSSLEGELKGTFY 508
+ + +E L+ L+GE KG +Y
Sbjct: 2442 ERRSVEKISVDALAKLDGEFKGKYY 2466
Score = 53.2 bits (122), Expect = 1e-07
Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Frame = +3
Query: 84 LKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAESYSVFAELF 251
+ K LT+E++ SL++K T G TL D IQ+GV+N VG A D ESY VFAEL
Sbjct: 2323 MAKVLTKEIYRSLRDKSTKNGFTLDDIIQTGVDNPGHPFIMTVGCVAGDEESYDVFAELL 2382
Query: 252 D 254
D
Sbjct: 2383 D 2383
Score = 35.1 bits (77), Expect = 0.041
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 484 GRAQGHVLPLTGMSKETQQQLIHDHFLF 567
G +G PL M+ E Q+QLI+DHFLF
Sbjct: 2459 GEFKGKYYPLNKMTDEEQEQLINDHFLF 2486
>SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1115
Score = 63.3 bits (147), Expect = 1e-10
Identities = 32/85 (37%), Positives = 50/85 (58%)
Frame = +2
Query: 254 PIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTES 433
P+IE HNG+KKT KH + + +G D ++V+S RVR GRS+ G P + +
Sbjct: 431 PVIEKRHNGYKKTAKHKT-DLNPSNLIGGDDLDEKYVLSCRVRTGRSIRGLCLPPWCSRA 489
Query: 434 QYKEMEDKVSGTLSSLEGELKGTFY 508
+ +E+E V+ L+ L+G L G +Y
Sbjct: 490 ERREVEKIVTSALAELDGPLAGKYY 514
Score = 62.1 bits (144), Expect = 3e-10
Identities = 33/85 (38%), Positives = 48/85 (56%)
Frame = +2
Query: 254 PIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTES 433
P+IE H+G++KTD H D +G D ++V+S RVR GRS+ G P T +
Sbjct: 62 PVIEKRHDGYRKTDMHKTDLNPD-HLIGGDDLDEKYVLSCRVRTGRSIRGLGLPPHCTRA 120
Query: 434 QYKEMEDKVSGTLSSLEGELKGTFY 508
+ +E+E L SL+GE KG +Y
Sbjct: 121 ERREVEKVSVEALDSLDGEFKGKYY 145
Score = 59.3 bits (137), Expect = 2e-09
Identities = 33/85 (38%), Positives = 47/85 (55%)
Frame = +2
Query: 254 PIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTES 433
P+IE HNG+ K KH D + +G D FV+S RVR GRS+ G P T +
Sbjct: 828 PVIEARHNGYLKGAKHVTDLNPD-NLVGGDDLDANFVLSCRVRTGRSIRGLGLPPHCTRA 886
Query: 434 QYKEMEDKVSGTLSSLEGELKGTFY 508
+ +E+E L++L+G LKG +Y
Sbjct: 887 ERREVEKITVDALATLDGPLKGKYY 911
Score = 48.4 bits (110), Expect = 4e-06
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Frame = +3
Query: 21 ATLEKLEAGFSKLQGSD-SKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN---- 185
A +K + ++ G + ++ + K+LTR+V++ L N KT G TL IQ+GV+N
Sbjct: 745 AERQKASSTLRRVPGPEQAQHYMAKFLTRDVYNKLCNLKTPSGFTLDGVIQTGVDNPGHP 804
Query: 186 LDSGVGIYAPDAESYSVFAELFD 254
VG A D E+Y VFA L D
Sbjct: 805 FIFTVGCVAGDEETYKVFAALLD 827
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Frame = +3
Query: 84 LKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAESYSVFAELF 251
+ K +T++V+ L N +T G TL IQ+GV+N VG A D ESY VFA++F
Sbjct: 1 MAKCMTKDVYQRLSNLRTPSGYTLDMAIQTGVDNPGHPFIMTVGCVAGDEESYDVFADMF 60
Query: 252 D 254
D
Sbjct: 61 D 61
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Frame = +3
Query: 84 LKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAESYSVFAELF 251
+ K LT V++ L KT G TL IQ+GV+N VG A D ESY VFA++F
Sbjct: 370 MAKCLTPAVYNMLSVLKTPTGYTLDMAIQTGVDNPGHPFIMTVGCVAGDEESYDVFADMF 429
Query: 252 D 254
D
Sbjct: 430 D 430
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1
Query: 484 GRAQGHVLPLTGMSKETQQQLIHDHFLF 567
G +G PL+ M+ Q+QLI+DHFLF
Sbjct: 904 GPLKGKYYPLSKMTDAEQEQLINDHFLF 931
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 484 GRAQGHVLPLTGMSKETQQQLIHDHFLF 567
G +G PL+ M+ Q QLI DHFLF
Sbjct: 138 GEFKGKYYPLSNMTAAEQDQLIDDHFLF 165
>SB_6621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 62.1 bits (144), Expect = 3e-10
Identities = 34/82 (41%), Positives = 46/82 (56%)
Frame = +2
Query: 257 IIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQ 436
+IEDYH+ +K D H D +LDP F+ STR+R GR+L+GY P LT+ +
Sbjct: 244 VIEDYHSPYKLKDGHTSDMNPDRVNAPDLDPDNRFIRSTRIRVGRNLKGYGLAPSLTKKE 303
Query: 437 YKEMEDKVSGTLSSLEGELKGT 502
E+E K S T S +LK T
Sbjct: 304 RVELEKKASFTAKS--SQLKTT 323
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/69 (44%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Frame = +3
Query: 75 KSLLKKYLTREVFDSLKNKKTSFGSTLL--------DCIQSGVENLDSGVG-IYAPDAES 227
K LLKKYLT +VFD LK KKT G D E +D+ V + D ES
Sbjct: 174 KCLLKKYLTNQVFDQLKTKKTKRGDGGCSDGGGGGGDVDDDDGEYIDADVAVVIVGDEES 233
Query: 228 YSVFAELFD 254
Y+VFA LFD
Sbjct: 234 YTVFAPLFD 242
>SB_8314| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 309
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 PIIEDYHNGFK-KTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTE 430
P+I+ YH GF T KH + + D A ++STR+R R+L +P NP ++
Sbjct: 20 PVIQAYHKGFDINTSKHVTDMDPEKISTELSDSAKAKIISTRIRVARNLSMFPLNPGGSK 79
Query: 431 SQYKEMEDKVSGTLSSLEGELKGTFY 508
E+ D ++ SL +L G Y
Sbjct: 80 ESRLEIIDLMAKVYDSLGDDLAGNLY 105
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 496 GHVLPLTGMSKETQQQLIHDHFLFK 570
G++ T M+ E +Q+L+ DHFLF+
Sbjct: 102 GNLYRHTTMTDEERQKLVDDHFLFR 126
>SB_8138| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 383
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 PIIEDYHNGFK-KTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTE 430
P+I+ YH GF T KH + + D A ++STR+R R+L +P NP ++
Sbjct: 112 PVIQAYHKGFDINTSKHVTDMDPEKISTELSDSAKAKIISTRIRVARNLSMFPLNPGGSK 171
Query: 431 SQYKEMEDKVSGTLSSLEGELKGTFY 508
E+ D ++ SL +L G Y
Sbjct: 172 ESRLEIIDLMAKVYDSLGDDLAGNLY 197
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 496 GHVLPLTGMSKETQQQLIHDHFLFK 570
G++ T M+ E +Q+L+ DHFLF+
Sbjct: 194 GNLYRHTTMTDEERQKLVDDHFLFR 218
>SB_54283| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.4e-13)
Length = 490
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/66 (33%), Positives = 36/66 (54%)
Frame = +3
Query: 57 LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSV 236
LQ + K++ ++L +++ K+ KT +G L D + V D+ +GI A D E Y
Sbjct: 63 LQQKNRKTVASQFLNEAIYEEYKDAKTVYGFRLFDILSYDVSYRDT-IGIRATDEECYYT 121
Query: 237 FAELFD 254
F +LFD
Sbjct: 122 FIKLFD 127
Score = 34.7 bits (76), Expect = 0.054
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +2
Query: 323 VDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLE 484
V G LD VVS RVR RSL+G+PF + ++ +E+++ V L SL+
Sbjct: 279 VGVTGTLDA---HVVSCRVRVVRSLQGFPFAWVCSPNERREIQNVVKQALDSLK 329
>SB_20979| Best HMM Match : ATP-gua_PtransN (HMM E-Value=5.6e-08)
Length = 322
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/66 (33%), Positives = 36/66 (54%)
Frame = +3
Query: 57 LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSV 236
LQ + K++ ++L +++ K+ KT +G L D + V D+ +GI A D E Y
Sbjct: 54 LQQKNRKTVASQFLNEAIYEEYKDAKTVYGFRLFDILSYDVSYRDT-IGIRATDEECYYT 112
Query: 237 FAELFD 254
F +LFD
Sbjct: 113 FIKLFD 118
Score = 37.1 bits (82), Expect = 0.010
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +2
Query: 323 VDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEG 487
V G LD VVS RVR RSL+G+PF + ++ +E+++ V L SL+G
Sbjct: 270 VGVTGTLDA---HVVSCRVRVVRSLQGFPFAWVCSPNERREIQNVVKQALDSLKG 321
>SB_47199| Best HMM Match : ATP-gua_PtransN (HMM E-Value=9.6e-15)
Length = 132
Score = 35.5 bits (78), Expect = 0.031
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +3
Query: 78 SLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLD----SGVGIYAPDAESY 230
+++ ++LT E++ L ++KTS G TL IQ GV+N S GI A D ES+
Sbjct: 77 NIMARHLTPEMYVHLCDRKTSNGFTLDQAIQPGVDNPTHPNISPCGIVAGDEESF 131
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 32.7 bits (71), Expect = 0.22
Identities = 27/88 (30%), Positives = 39/88 (44%)
Frame = +1
Query: 1 PQQWSTPQPSRNWRLVSASSRDPTLSRC*RSTLPGKYSTA*RTKRPHSDPPSLTASNRVS 180
P STP S T S ++P ST P S P + +A + S
Sbjct: 255 PSMPSTPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTP-STPSTPSAPSTPS 313
Query: 181 RTWTPASVSTRRTPSRTPCSPSCLTDHR 264
TP++ ST +TPS TPC+P+ + +R
Sbjct: 314 TPSTPSTPSTPKTPS-TPCTPNTPSTNR 340
Score = 32.7 bits (71), Expect = 0.22
Identities = 27/88 (30%), Positives = 39/88 (44%)
Frame = +1
Query: 1 PQQWSTPQPSRNWRLVSASSRDPTLSRC*RSTLPGKYSTA*RTKRPHSDPPSLTASNRVS 180
P STP S T S ++P ST P S P + +A + S
Sbjct: 805 PSMPSTPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTP-STPSTPSAPSTPS 863
Query: 181 RTWTPASVSTRRTPSRTPCSPSCLTDHR 264
TP++ ST +TPS TPC+P+ + +R
Sbjct: 864 TPSTPSTPSTPKTPS-TPCTPNTPSTNR 890
Score = 30.3 bits (65), Expect = 1.2
Identities = 28/82 (34%), Positives = 35/82 (42%)
Frame = +1
Query: 1 PQQWSTPQPSRNWRLVSASSRDPTLSRC*RSTLPGKYSTA*RTKRPHSDPPSLTASNRVS 180
P STP R S S T S + P ST T HS P + + + S
Sbjct: 18 PSTPSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPSTP-STPCTHSTPSAPSTPSTPS 76
Query: 181 RTWTPASVSTRRTPSRTPCSPS 246
TP++ ST TPS TP +PS
Sbjct: 77 TPCTPSTPSTPSTPS-TPSTPS 97
Score = 28.7 bits (61), Expect = 3.6
Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 PQQWSTPQPSRNWRLVSASSRDPTLSRC*RSTLPGKYSTA*RTKRPHSDPPSLTASNRVS 180
P STP S S T S PG ST P + +T S +S
Sbjct: 132 PSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPITPGTPSTP---STPSAPGTPITPST-LS 187
Query: 181 RTWTPASVSTRRTPS--RTPCSPSCLT 255
TP++ STR TPS TP +PS L+
Sbjct: 188 TPSTPSTPSTRSTPSTPSTPSTPSTLS 214
Score = 28.7 bits (61), Expect = 3.6
Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 PQQWSTPQPSRNWRLVSASSRDPTLSRC*RSTLPGKYSTA*RTKRPHSDPPSLTASNRVS 180
P STP + + S T S PG ST P + +T S +S
Sbjct: 682 PSTPSTPSTPSTPSMPNTPSTPSTPSTPSTPITPGTPSTP---STPSAPGTPITPST-LS 737
Query: 181 RTWTPASVSTRRTPS--RTPCSPSCLT 255
TP++ STR TPS TP +PS L+
Sbjct: 738 TPSTPSTPSTRSTPSTPSTPSTPSTLS 764
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +1
Query: 100 PGKYSTA*RTKRPHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPCSPS 246
P +ST P S P + + + S T TP++ ST TPS TP +PS
Sbjct: 425 PCTHSTPGTPSTP-STPSTPSTPSTPSLTHTPSTPSTPSTPS-TPSTPS 471
Score = 27.5 bits (58), Expect = 8.2
Identities = 28/84 (33%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = +1
Query: 1 PQQWSTPQPSRNWRLVSASSRDPTLSRC*RSTLPGKYST--A*RTKRPHSDPPSLTASNR 174
P STP S S T S + P ST A T S P + +A
Sbjct: 467 PSTPSTPSTPSTPSTPSTPSTPSTPSTSSTPSTPSTPSTPSAPGTPGTPSTPSTPSAPGT 526
Query: 175 VSRTWTPASVSTRRTPSRTPCSPS 246
S TP++ ST TPS TP +PS
Sbjct: 527 PSTPSTPSTPSTPSTPS-TPSTPS 549
>SB_57048| Best HMM Match : S-antigen (HMM E-Value=3.4)
Length = 242
Score = 31.9 bits (69), Expect = 0.38
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 133 RPHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPCSP 243
RPH+DP TWTP +T P+RTP P
Sbjct: 175 RPHTDPTQTPHGPHTDPTWTPHRPNT--DPTRTPHGP 209
>SB_15059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 947
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = -3
Query: 492 SSPSRLDRVPETLSSISLYWDSVRQGLKGYPSSERPQRTRVETTNSPAGSRLPSVSTSP 316
S+P R+ + TLSSI + + KG P RPQ + + + AGS + +P
Sbjct: 622 SAPPRVRHLDSTLSSIDNHVTRINSARKGRPL--RPQSSPAKVSFKKAGSEVEETPFNP 678
>SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14)
Length = 1104
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = -2
Query: 271 VVLDDRSNSSANTEYDSASGA*IPTPESKFSTPDWMQSRR 152
VV+D+ +N ++E ++AS P P SK + P+ Q+++
Sbjct: 875 VVIDEVNNDDEDSEEENASSKKTPCPASKKAPPNNQQAKK 914
>SB_17249| Best HMM Match : T-box (HMM E-Value=4.8e-11)
Length = 152
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = -2
Query: 346 VEVAERVHVSPVLGRVLVGLLEAIVVVLDDRSN--SSANTEYDSASGA*IPTPESKFSTP 173
+E +++ V LG++L +++ D S SSA T S+S A +PT + + P
Sbjct: 34 IETEDKLDVEQELGKLLKLIIKGPSAETDRSSTATSSATTTSKSSSPAVLPTTDRRMFPP 93
Query: 172 DWMQSRRVDPNEVFLF 125
+ +DP + F
Sbjct: 94 IKARISGLDPRAKYFF 109
>SB_6669| Best HMM Match : zf-C4_Topoisom (HMM E-Value=1.2)
Length = 523
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +1
Query: 151 PSLTASNRVSRTWTPASVSTRRTPSRT------PCSPSCLTDHRGLPQWLQEDRQAP 303
P + A + W P+ + T+ PSR PC C D+ +P W+ D++ P
Sbjct: 154 PCIPAEKPIEE-WRPSELGTQTRPSRRRYLATRPCQVVCCGDYGQVPPWV--DKEGP 207
>SB_32465| Best HMM Match : Chromo (HMM E-Value=3.5e-16)
Length = 411
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 148 PPSLTASNRVSRTWTPASVSTRRTPSRTPCSPSCLTDHRGLP 273
P ++ S RV+ T +P +S R TP +TP + + ++ G+P
Sbjct: 275 PGPVSVSPRVATTHSPPPISPRVTPEKTPTAST--SNGHGIP 314
>SB_50357| Best HMM Match : Toxin_8 (HMM E-Value=2.4)
Length = 304
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +1
Query: 127 TKRPHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPCSPSCLTDHRGLPQ 276
T RP S PPS +R R S ++R P +PS L H G PQ
Sbjct: 120 TPRPPSTPPSPRKHSRPCRPTRSQSSTSRARPVFQNNNPS-LVVHTGAPQ 168
>SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2174
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -3
Query: 411 KGYPSSERPQRTRVETTNS-PAGSRLPSVSTSP 316
+G SSERP+R+R T + P S LP +++P
Sbjct: 1178 RGSLSSERPERSRRRRTETEPRDSSLPCTASTP 1210
>SB_35966| Best HMM Match : CpaB (HMM E-Value=3.6)
Length = 277
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = -1
Query: 128 VLQAVEYFPGKVLLQQRLRVGSLELAETSLQFLEGCGVDH 9
+ +AV P +V+L R+++GS +LA+ L+ L+G G++H
Sbjct: 204 ITRAVIDGPLRVVL--RVQIGSCDLADEHLRKLDGGGLEH 241
>SB_35368| Best HMM Match : UIM (HMM E-Value=6.3e-06)
Length = 362
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 202 PTPESKFSTPDWMQSRRVDPNEVFLFFRLSNTS 104
P P+ KFS P + SR +D E L F L+ S
Sbjct: 5 PKPKEKFSEPVIIASRNLDSVEARLAFNLTTVS 37
>SB_48991| Best HMM Match : Rad52_Rad22 (HMM E-Value=5.2e-12)
Length = 353
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 39 EAGFSKLQGSDSKSL-LKKYLTREVFDSLKNKKTSFGSTLLDCI 167
+ G+ +G SK+L L+K V D LK +FG L +C+
Sbjct: 30 DVGYGVSEGMKSKALSLEKARKEAVTDGLKRALKNFGQALGNCV 73
>SB_43972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 899
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +1
Query: 133 RPHSDPPSLTASNRVSRTWTPASVST--RRTPSRTPCSP 243
R HSDPP L + S +P+ +T R++ + CSP
Sbjct: 800 RKHSDPPPLPPRRKKSHEDSPSPCTTPRRKSTELSRCSP 838
>SB_33669| Best HMM Match : EMP70 (HMM E-Value=3.9e-11)
Length = 809
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 163 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 50
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 65 QDRAADKNHVYISYR-DCKKLDEEAFPEDLDEAPWSVL 101
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 136 PHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPCSP 243
PH++P TWTP +T P+RTP P
Sbjct: 120 PHTNPTQTPHGPHTDPTWTPHRPNT--DPTRTPHGP 153
>SB_3503| Best HMM Match : Rad52_Rad22 (HMM E-Value=1e-24)
Length = 398
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 39 EAGFSKLQGSDSKSL-LKKYLTREVFDSLKNKKTSFGSTLLDCI 167
+ G+ +G SK+L L+K V D LK +FG L +C+
Sbjct: 75 DVGYGVSEGMKSKALSLEKARKEAVTDGLKRALKNFGQALGNCV 118
>SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37)
Length = 942
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 7 QWSTPQPSRNWRL-VSASSRDPTLSRC*RSTLPGKYSTA*RTKRPHSDPPSLTASNRVSR 183
+W P PS N V SS DP L R S+ P + ++ + S+ PS +S R +
Sbjct: 851 EWRPPSPSPNTEADVKESSDDPPL-RQRTSSFPVEINSTYPPRYASSNSPSAPSSPRTTA 909
Query: 184 TWTPAS 201
++ A+
Sbjct: 910 SYGTAT 915
>SB_31879| Best HMM Match : Exo_endo_phos (HMM E-Value=1.4)
Length = 200
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 163 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 50
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 145 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 181
>SB_25245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 163 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 50
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 101 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 137
>SB_5521| Best HMM Match : SWIM (HMM E-Value=6.9)
Length = 150
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 278 GFKKTDKHPPKNWGDVDTLGNLDPAGEF 361
G K + PP + G+ DT G D GEF
Sbjct: 9 GGSKGFRPPPYSCGEFDTRGEFDTCGEF 36
>SB_47851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 893
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 163 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 50
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 337 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 373
>SB_38561| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4)
Length = 432
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 163 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 50
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 145 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 181
>SB_35013| Best HMM Match : Exo_endo_phos (HMM E-Value=0.027)
Length = 381
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 163 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 50
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 189 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 225
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +1
Query: 388 PLARGVPLQPLPHRVPVQGDGGQGLRHPVQPRGRAQGHVLPLTGMSKETQQ 540
P A V PLP P+ + HP P +G + LTG+ QQ
Sbjct: 233 PAAHPVSTGPLP---PIHPSQHRPQEHPHLPAAAGRGATVKLTGLQNRQQQ 280
>SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 7381
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 253 TDHRGLPQWLQEDRQAPAQ 309
T HR QWLQ D Q P+Q
Sbjct: 2566 TPHRNTRQWLQVDLQKPSQ 2584
>SB_26005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 947
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 163 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 50
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 101 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 137
>SB_12999| Best HMM Match : Exo_endo_phos (HMM E-Value=1.8e-10)
Length = 734
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 163 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 50
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 605 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 641
>SB_6463| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13)
Length = 675
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 163 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 50
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 119 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 155
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,130,157
Number of Sequences: 59808
Number of extensions: 321552
Number of successful extensions: 1489
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1465
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1361520496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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