Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0228.Seq
(572 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical pr... 113 1e-25
AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical... 109 1e-24
AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical ... 109 2e-24
U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical pr... 104 4e-23
U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical pr... 104 4e-23
Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical pr... 93 1e-19
AF106575-6|AAC78175.2| 244|Caenorhabditis elegans Hypothetical ... 60 8e-10
U61948-8|AAB03147.2| 782|Caenorhabditis elegans Human hcf1 rela... 37 0.012
AF072907-1|AAD12580.1| 782|Caenorhabditis elegans host cell fac... 37 0.012
U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical pr... 31 0.44
U50067-5|AAY86219.1| 306|Caenorhabditis elegans Hypothetical pr... 30 1.0
AC084159-16|AAK39357.1| 205|Caenorhabditis elegans Hypothetical... 30 1.0
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 29 3.1
Z69361-3|CAA93289.1| 533|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z68882-20|CAA93112.1| 533|Caenorhabditis elegans Hypothetical p... 28 4.1
Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical p... 27 7.2
Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 27 7.2
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 27 7.2
AF408755-1|AAO27834.1| 360|Caenorhabditis elegans unknown prote... 27 7.2
AF047651-4|AAK67208.2| 516|Caenorhabditis elegans Hypothetical ... 27 7.2
AF047651-3|AAZ82848.1| 515|Caenorhabditis elegans Hypothetical ... 27 7.2
>Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical
protein ZC434.8 protein.
Length = 360
Score = 113 bits (271), Expect = 1e-25
Identities = 50/88 (56%), Positives = 67/88 (76%), Gaps = 3/88 (3%)
Frame = +2
Query: 254 PIIEDYHNGFKKTDKHPPKNWGD--VDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLT 427
P+IE+YHNGFK TD P + G+ V L +LDP G+F+VSTR+RCGRSL+GYPFNPCL+
Sbjct: 85 PVIEEYHNGFKATDTQPAMDLGEKNVGELADLDPEGKFIVSTRIRCGRSLQGYPFNPCLS 144
Query: 428 ESQYKEMEDKVSGTLSSL-EGELKGTFY 508
E+ YK ME ++ +S+ + ELKGT+Y
Sbjct: 145 ETNYKMMETRMKEIFNSITDPELKGTYY 172
Score = 99.1 bits (236), Expect = 2e-21
Identities = 49/76 (64%), Positives = 62/76 (81%), Gaps = 1/76 (1%)
Frame = +3
Query: 30 EKLEAGFSKLQG-SDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGI 206
+ +E ++KLQG SD SLLKK+LT++V K+KKT G+TLLD IQSG ENLDSGVGI
Sbjct: 9 KSIEEVYTKLQGASDCSSLLKKHLTKDVVAKNKSKKTRLGATLLDVIQSGGENLDSGVGI 68
Query: 207 YAPDAESYSVFAELFD 254
YAPDAESY++FA+LF+
Sbjct: 69 YAPDAESYTLFADLFN 84
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +1
Query: 493 QGHVLPLTGMSKETQQQLIHDHFLFK 570
+G PLTGM +ET+++LI DHFLFK
Sbjct: 168 KGTYYPLTGMDEETKKKLIADHFLFK 193
>AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical
protein F32B5.1 protein.
Length = 427
Score = 109 bits (263), Expect = 1e-24
Identities = 51/84 (60%), Positives = 68/84 (80%), Gaps = 3/84 (3%)
Frame = +3
Query: 12 VDAATLEKLEAGFSKLQGSDS---KSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVE 182
VDAAT++K+E ++KL G + KSLLKK+LT+EV + LK K+T G+TL DCI+SGV
Sbjct: 69 VDAATIKKIEEAYAKLNGPEGAKCKSLLKKHLTKEVVEKLKTKRTKVGATLYDCIRSGVY 128
Query: 183 NLDSGVGIYAPDAESYSVFAELFD 254
NLD+GVG+YAPDAE+Y++FA LFD
Sbjct: 129 NLDAGVGVYAPDAEAYTLFAPLFD 152
Score = 94.7 bits (225), Expect = 4e-20
Identities = 47/87 (54%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Frame = +2
Query: 257 IIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTE 430
IIEDYH GF K PP + G+ T LDP G+++ STR+RCGRSL+GYPFNPCLT+
Sbjct: 154 IIEDYH-GFSPKQKQPPVDLGEGKTKEFPPLDPKGKYIKSTRIRCGRSLKGYPFNPCLTQ 212
Query: 431 SQYKEMEDKVSGTLSSL-EGELKGTFY 508
Y EME KV S + ELKG +Y
Sbjct: 213 DNYLEMEGKVKKAFSEYSDKELKGKYY 239
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +1
Query: 493 QGHVLPLTGMSKETQQQLIHDHFLFK 570
+G PL GM K+TQ+QLI DHFLFK
Sbjct: 235 KGKYYPLDGMGKDTQKQLIADHFLFK 260
>AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical
protein W10C8.5 protein.
Length = 399
Score = 109 bits (261), Expect = 2e-24
Identities = 50/84 (59%), Positives = 68/84 (80%), Gaps = 3/84 (3%)
Frame = +3
Query: 12 VDAATLEKLEAGFSKLQGSDS---KSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVE 182
VDAAT++K+E ++KL G + KSLLKK+LT++V + LK K+T G+TL DCI+SGV
Sbjct: 41 VDAATIKKIEEAYAKLNGPEGAKCKSLLKKHLTKDVVEKLKTKRTKLGATLYDCIRSGVY 100
Query: 183 NLDSGVGIYAPDAESYSVFAELFD 254
NLD+GVG+YAPDAE+Y++FA LFD
Sbjct: 101 NLDAGVGVYAPDAEAYTLFAPLFD 124
Score = 94.7 bits (225), Expect = 4e-20
Identities = 47/87 (54%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Frame = +2
Query: 257 IIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTE 430
IIEDYH GF K PP + G+ T LDP G+++ STR+RCGRSL+GYPFNPCLT+
Sbjct: 126 IIEDYH-GFSPKQKQPPVDLGEGKTKEFPPLDPKGKYIKSTRIRCGRSLKGYPFNPCLTQ 184
Query: 431 SQYKEMEDKVSGTLSSL-EGELKGTFY 508
Y EME KV S + ELKG +Y
Sbjct: 185 DNYLEMEGKVKKAFSEYSDKELKGKYY 211
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +1
Query: 493 QGHVLPLTGMSKETQQQLIHDHFLFK 570
+G PL GM K+TQ+QLI DHFLFK
Sbjct: 207 KGKYYPLDGMGKDTQKQLIADHFLFK 232
>U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical
protein F46H5.3b protein.
Length = 359
Score = 104 bits (250), Expect = 4e-23
Identities = 50/82 (60%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 VDAATLEKLEAGFSKLQGS-DSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENL 188
V + K+E G++KLQ + + SLLKKYLT+EV D LK+KKT G+ LLD IQSGV NL
Sbjct: 3 VSPDVIAKIEEGYAKLQAAPECHSLLKKYLTKEVVDQLKDKKTKLGANLLDVIQSGVANL 62
Query: 189 DSGVGIYAPDAESYSVFAELFD 254
DSGVG+YAPDAE+Y++F LFD
Sbjct: 63 DSGVGVYAPDAEAYTLFKPLFD 84
Score = 98.3 bits (234), Expect = 3e-21
Identities = 45/88 (51%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
Frame = +2
Query: 254 PIIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLT 427
P+I+DYHNGF K P + G+ T L +LDP G+F+ STR+RCGRSL+GYPFNPCL+
Sbjct: 85 PLIQDYHNGFAPDAKQPNTDLGEGKTSALVDLDPEGKFINSTRIRCGRSLQGYPFNPCLS 144
Query: 428 ESQYKEMEDKVSGTLSSL-EGELKGTFY 508
E+ Y EME KV ++ + EL G ++
Sbjct: 145 EANYLEMESKVKAIFDNITDPELAGKYF 172
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = +1
Query: 496 GHVLPLTGMSKETQQQLIHDHFLFK 570
G PL GM+KE Q QLI DHFLFK
Sbjct: 169 GKYFPLDGMTKEIQDQLIKDHFLFK 193
>U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical
protein F46H5.3a protein.
Length = 396
Score = 104 bits (250), Expect = 4e-23
Identities = 50/82 (60%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 VDAATLEKLEAGFSKLQGS-DSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENL 188
V + K+E G++KLQ + + SLLKKYLT+EV D LK+KKT G+ LLD IQSGV NL
Sbjct: 40 VSPDVIAKIEEGYAKLQAAPECHSLLKKYLTKEVVDQLKDKKTKLGANLLDVIQSGVANL 99
Query: 189 DSGVGIYAPDAESYSVFAELFD 254
DSGVG+YAPDAE+Y++F LFD
Sbjct: 100 DSGVGVYAPDAEAYTLFKPLFD 121
Score = 98.3 bits (234), Expect = 3e-21
Identities = 45/88 (51%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
Frame = +2
Query: 254 PIIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLT 427
P+I+DYHNGF K P + G+ T L +LDP G+F+ STR+RCGRSL+GYPFNPCL+
Sbjct: 122 PLIQDYHNGFAPDAKQPNTDLGEGKTSALVDLDPEGKFINSTRIRCGRSLQGYPFNPCLS 181
Query: 428 ESQYKEMEDKVSGTLSSL-EGELKGTFY 508
E+ Y EME KV ++ + EL G ++
Sbjct: 182 EANYLEMESKVKAIFDNITDPELAGKYF 209
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = +1
Query: 496 GHVLPLTGMSKETQQQLIHDHFLFK 570
G PL GM+KE Q QLI DHFLFK
Sbjct: 206 GKYFPLDGMTKEIQDQLIKDHFLFK 230
>Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical
protein F44G3.2 protein.
Length = 372
Score = 93.1 bits (221), Expect = 1e-19
Identities = 47/87 (54%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Frame = +2
Query: 257 IIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTE 430
IIEDYH G K PP + G+ T LDP G+++ STR+RCGRSL GY FNPCLTE
Sbjct: 99 IIEDYH-GLGPDQKQPPVDLGEGKTKEFPPLDPKGKYIKSTRIRCGRSLNGYQFNPCLTE 157
Query: 431 SQYKEMEDKVSGTLSSL-EGELKGTFY 508
Y EME+KV S + ELKGT+Y
Sbjct: 158 DNYLEMEEKVKKAFSEFSDEELKGTYY 184
Score = 89.8 bits (213), Expect = 1e-18
Identities = 44/84 (52%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
Frame = +3
Query: 12 VDAATLEKLEAGFSKLQGSDS---KSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVE 182
VD T++K+E + L G D SLLKK LT++V + LK K T G+ L DCI+SGV
Sbjct: 14 VDPVTIKKIEEAYVMLNGPDGAKCSSLLKKNLTKDVIEKLKTKSTKLGANLYDCIRSGVY 73
Query: 183 NLDSGVGIYAPDAESYSVFAELFD 254
LD+ VG+YAPDAE+Y++FA LFD
Sbjct: 74 CLDALVGVYAPDAEAYTLFAPLFD 97
Score = 40.7 bits (91), Expect = 7e-04
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +1
Query: 493 QGHVLPLTGMSKETQQQLIHDHFLFK 570
+G PL GMSK+TQ QLI DHFLFK
Sbjct: 180 KGTYYPLDGMSKDTQNQLIADHFLFK 205
>AF106575-6|AAC78175.2| 244|Caenorhabditis elegans Hypothetical
protein K04F1.1 protein.
Length = 244
Score = 60.5 bits (140), Expect = 8e-10
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Frame = +3
Query: 12 VDAATLEKLEAGFSKLQGSDS---KSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVE 182
VDAAT++K+E + KL G + KSLL+KYLT+++ + LK K T G+++ DCI +G+
Sbjct: 91 VDAATIKKIEEAYVKLNGPEGAKCKSLLRKYLTKDIVEKLKTKCTKLGASVYDCILTGLR 150
Query: 183 NLDSGVGIYA 212
+ G+ A
Sbjct: 151 FVRQGLRFVA 160
>U61948-8|AAB03147.2| 782|Caenorhabditis elegans Human hcf1 related
protein 1 protein.
Length = 782
Score = 36.7 bits (81), Expect = 0.012
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +1
Query: 88 RSTLPGKYSTA*RTKRPHSDPPS---LTASNRVSRTWTPASVSTRRTPSRTPCSPSCLTD 258
+S P K +T K+P PPS S + + P+ +ST+ T P P TD
Sbjct: 420 QSVSPIKRATTSPRKQPSIVPPSQKETEQSPKKPQGTAPSIISTQGTTYTAPADPKPATD 479
Query: 259 HRGLPQWLQEDRQ 297
GLPQ L ED +
Sbjct: 480 EGGLPQDLFEDTE 492
>AF072907-1|AAD12580.1| 782|Caenorhabditis elegans host cell factor
1 protein.
Length = 782
Score = 36.7 bits (81), Expect = 0.012
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +1
Query: 88 RSTLPGKYSTA*RTKRPHSDPPS---LTASNRVSRTWTPASVSTRRTPSRTPCSPSCLTD 258
+S P K +T K+P PPS S + + P+ +ST+ T P P TD
Sbjct: 420 QSVSPIKRATTSPRKQPSIVPPSQKETEQSPKKPQGTAPSIISTQGTTYTAPADPKPATD 479
Query: 259 HRGLPQWLQEDRQ 297
GLPQ L ED +
Sbjct: 480 EGGLPQDLFEDTE 492
>U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical
protein T03G11.3 protein.
Length = 349
Score = 31.5 bits (68), Expect = 0.44
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 52 ASSRDPTLSRC*RSTLPGKYSTA*RTKRPHSDPPSLTASNRVSRTWTPASVST--RRTPS 225
AS+R +LS R TLP ++ R+ D P +S R TPAS +T R+ S
Sbjct: 257 ASNRHTSLSAGMRPTLPPMTPSSKRSSSAKRDAPLQQSSTPQQRLKTPASTTTTASRSGS 316
Query: 226 RTPCSPSCLTD 258
RT S +C D
Sbjct: 317 RT-SSRACPRD 326
>U50067-5|AAY86219.1| 306|Caenorhabditis elegans Hypothetical
protein C18F3.4 protein.
Length = 306
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +1
Query: 106 KYSTA*RTKRPHSDPPSLTAS---NRVSRTWTPASVSTRRTP 222
K S R PHS P++++S N + +WTP+++S TP
Sbjct: 88 KLSPPRRQSNPHSSLPAISSSTVKNEPTDSWTPSALSNDPTP 129
>AC084159-16|AAK39357.1| 205|Caenorhabditis elegans Hypothetical
protein Y73B3A.7 protein.
Length = 205
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -3
Query: 426 VRQGLKGYPSSERPQRTRVETTNSPAGSRLP-SVSTSPQFLGGCLSV 289
VR+ + GY + + ++++TN+P SRLP + Q LGG L +
Sbjct: 47 VRKSIMGYRGKRKTDQ-QLKSTNNPTSSRLPLNTKNVAQALGGRLHI 92
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +1
Query: 136 PHSDPPSLTASNRVSRTW---TPASVSTRRTPSRTPCSP 243
P + S T + R +TW TP + +TR+TP T P
Sbjct: 382 PTTQTSSTTQTPRTKQTWAPWTPPTTTTRQTPPTTQAPP 420
>Z69361-3|CAA93289.1| 533|Caenorhabditis elegans Hypothetical
protein T13H10.1 protein.
Length = 533
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -3
Query: 498 PLSSPSRLDRVPETLSSISLYWDSVRQGLKGYPSSERPQRTRVETTNSPA 349
P P R ++ E S+S +S +G+K + RP RTR+ NSP+
Sbjct: 424 PPFEPERQEKTQEMRKSMS---NSAEEGVK---KNRRPVRTRIRNGNSPS 467
>Z68882-20|CAA93112.1| 533|Caenorhabditis elegans Hypothetical
protein T13H10.1 protein.
Length = 533
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -3
Query: 498 PLSSPSRLDRVPETLSSISLYWDSVRQGLKGYPSSERPQRTRVETTNSPA 349
P P R ++ E S+S +S +G+K + RP RTR+ NSP+
Sbjct: 424 PPFEPERQEKTQEMRKSMS---NSAEEGVK---KNRRPVRTRIRNGNSPS 467
>Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical
protein C12D8.1c protein.
Length = 548
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 20 RNPREIGGWFQQAPGIRL*VAAEEVPYQGS-IRQPEEQ 130
+NP ++GGW Q + + A PY + I QP++Q
Sbjct: 391 QNPYQVGGWQQNSVYAQQTAAPAAAPYAAAGIVQPQQQ 428
>Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical
protein C12D8.1b protein.
Length = 611
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 20 RNPREIGGWFQQAPGIRL*VAAEEVPYQGS-IRQPEEQ 130
+NP ++GGW Q + + A PY + I QP++Q
Sbjct: 454 QNPYQVGGWQQNSVYAQQTAAPAAAPYAAAGIVQPQQQ 491
>Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical
protein C12D8.1a protein.
Length = 589
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 20 RNPREIGGWFQQAPGIRL*VAAEEVPYQGS-IRQPEEQ 130
+NP ++GGW Q + + A PY + I QP++Q
Sbjct: 432 QNPYQVGGWQQNSVYAQQTAAPAAAPYAAAGIVQPQQQ 469
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 160 TASNRVSRTWTPASVSTRRTPSRTPCSPSCLTDHRGLP 273
T ++ + T AS +T+ T S TP SP T H G P
Sbjct: 545 TVTSTTTLPSTTASTTTKTTTS-TPTSPQTTTTHVGAP 581
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 160 TASNRVSRTWTPASVSTRRTPSRTPCSPSCLTDHRGLP 273
T ++ + T AS +T+ T S TP SP T H G P
Sbjct: 386 TVTSTTTLPSTTASTTTKTTTS-TPTSPQTTTTHVGAP 422
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 160 TASNRVSRTWTPASVSTRRTPSRTPCSPSCLTDHRGLP 273
T ++ + T AS +T+ T S TP SP T H G P
Sbjct: 426 TVTSTTTLPSTTASTTTKTTTS-TPTSPQTTTTHVGAP 462
>AF408755-1|AAO27834.1| 360|Caenorhabditis elegans unknown protein
protein.
Length = 360
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = +1
Query: 133 RPHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPCSPSCLTDHRGLPQWLQEDRQAPAQE 312
+PH P ++ SR +P S T P SP + +PQ D+Q E
Sbjct: 35 QPHVRPHQQIPTSSYSRRKSPQSRETEAIVRTYPLSPKRIVQQHRMPQKNNPDQQHQMNE 94
Query: 313 L 315
+
Sbjct: 95 V 95
>AF047651-4|AAK67208.2| 516|Caenorhabditis elegans Hypothetical
protein C05D2.6a protein.
Length = 516
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = +1
Query: 133 RPHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPCSPSCLTDHRGLPQWLQEDRQAPAQE 312
+PH P ++ SR +P S T P SP + +PQ D+Q E
Sbjct: 191 QPHVRPHQQIPTSSYSRRKSPQSRETEAIVRTYPLSPKRIVQQHRMPQKNNPDQQHQMNE 250
Query: 313 L 315
+
Sbjct: 251 V 251
>AF047651-3|AAZ82848.1| 515|Caenorhabditis elegans Hypothetical
protein C05D2.6b protein.
Length = 515
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = +1
Query: 133 RPHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPCSPSCLTDHRGLPQWLQEDRQAPAQE 312
+PH P ++ SR +P S T P SP + +PQ D+Q E
Sbjct: 190 QPHVRPHQQIPTSSYSRRKSPQSRETEAIVRTYPLSPKRIVQQHRMPQKNNPDQQHQMNE 249
Query: 313 L 315
+
Sbjct: 250 V 250
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,587,902
Number of Sequences: 27780
Number of extensions: 228046
Number of successful extensions: 1125
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1115
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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