Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0227.Seq
         (628 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp. ...    66   6e-10
UniRef50_Q8GEF9 Cluster: Putative uncharacterized protein; n=1; ...    64   3e-09
UniRef50_UPI00005A3933 Cluster: PREDICTED: hypothetical protein ...    35   1.4  
UniRef50_UPI00015547F1 Cluster: PREDICTED: similar to IA-1; n=1;...    35   1.8  
UniRef50_Q1E5X1 Cluster: Putative uncharacterized protein; n=1; ...    34   2.4  
UniRef50_A0D095 Cluster: Chromosome undetermined scaffold_33, wh...    33   7.4  
UniRef50_Q1IW01 Cluster: Putative uncharacterized protein; n=1; ...    32   9.8  
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp...    32   9.8  

>UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp.
           SS|Rep: LacZ alpha peptide - Beggiatoa sp. SS
          Length = 73

 Score = 66.1 bits (154), Expect = 6e-10
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = -3

Query: 368 GFPRQALNRGLPLGFRFSALRHLDPKKLD 282
           GFPRQALNRGLPLGFRFSALRHLDPKKLD
Sbjct: 45  GFPRQALNRGLPLGFRFSALRHLDPKKLD 73



 Score = 44.8 bits (101), Expect = 0.002
 Identities = 22/36 (61%), Positives = 24/36 (66%)
 Frame = -2

Query: 498 DAPCSGALSAAGVVVTRSVSRYTCQRPSARSFRFLP 391
           DAPCSGALSAAGVVVTRSV+       +   F F P
Sbjct: 2   DAPCSGALSAAGVVVTRSVTATLASALAPAPFAFFP 37


>UniRef50_Q8GEF9 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 99

 Score = 64.1 bits (149), Expect = 3e-09
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = +3

Query: 510 SGKCARNPYLFIFLNTFKYVSAHETITL 593
           SGKCARNPYLFIFLNTFKYVSAHETITL
Sbjct: 27  SGKCARNPYLFIFLNTFKYVSAHETITL 54



 Score = 32.3 bits (70), Expect = 9.8
 Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +1

Query: 496 VRWHFRGNVRGTPICLFF*IHSNMYPLMRQ*-P*INASIILKKEE 627
           VRWHF G     P  LF  +++  Y    +    INASIILKKEE
Sbjct: 22  VRWHFSGKCARNPY-LFIFLNTFKYVSAHETITLINASIILKKEE 65


>UniRef50_UPI00005A3933 Cluster: PREDICTED: hypothetical protein
           XP_859466; n=1; Canis lupus familiaris|Rep: PREDICTED:
           hypothetical protein XP_859466 - Canis familiaris
          Length = 296

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 26/58 (44%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = -2

Query: 504 PPDAPCSGALSAAGVVVTRSVSRYTCQRPSARS-FRFLPFLSRHVRRLSPSSSKSGAP 334
           PPD PC+ ALS+A     RS  R    RPS+R   R   FL+R +RR  P  S S  P
Sbjct: 5   PPDLPCAQALSSAR---PRSPRR----RPSSRQRDRAGGFLTRRLRRARPGGSLSSGP 55


>UniRef50_UPI00015547F1 Cluster: PREDICTED: similar to IA-1; n=1;
           Ornithorhynchus anatinus|Rep: PREDICTED: similar to IA-1
           - Ornithorhynchus anatinus
          Length = 225

 Score = 34.7 bits (76), Expect = 1.8
 Identities = 26/87 (29%), Positives = 35/87 (40%)
 Frame = -2

Query: 579 HERIHI*MYLEK*TNRGSAHISPKVPPDAPCSGALSAAGVVVTRSVSRYTCQRPSARSFR 400
           H R     YL K  + G+        P  P +  L+  G        R  C R   +SF+
Sbjct: 126 HRRFRRPAYLRK--HLGTHEEGSVRAPMPPAALGLALPGPPAAEPGERRFCFRFPPKSFK 183

Query: 399 FLPFLSRHVRRLSPSSSKSGAPFRVPI 319
             PFLSRHV    PS  +     +VP+
Sbjct: 184 SSPFLSRHVDSCHPSDGRRLLLLQVPM 210


>UniRef50_Q1E5X1 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 682

 Score = 34.3 bits (75), Expect = 2.4
 Identities = 29/81 (35%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
 Frame = -2

Query: 534 RGSAHISPKVPPDAPCSGALSAAGVVVT--RSVSRYTCQRPSARSFRFLPFLSRHVRRLS 361
           RG     P  PP AP S A SAAG V       S YT Q P  R  R  P +  H  R  
Sbjct: 418 RGPLPAGPMAPPPAPPSVA-SAAGAVPQPLAQPSPYTPQHPQFRENRPTPTIPMHQPR-- 474

Query: 360 PSSSKSGAPFRVPI*CFTAPR 298
           P  + S A    P+  +  P+
Sbjct: 475 PQKTVSVADIESPMSLYNPPQ 495


>UniRef50_A0D095 Cluster: Chromosome undetermined scaffold_33, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_33,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1173

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -2

Query: 156 VYSFDL*GILPISAYWLKNELI*QKFNANFNKILTLTI 43
           +++F L G L    +WLKN+    KF++ F ++L L +
Sbjct: 665 IFNFSLQGALSYIDFWLKNQHFDDKFSSTFTQLLLLAL 702


>UniRef50_Q1IW01 Cluster: Putative uncharacterized protein; n=1;
           Deinococcus geothermalis DSM 11300|Rep: Putative
           uncharacterized protein - Deinococcus geothermalis
           (strain DSM 11300)
          Length = 171

 Score = 32.3 bits (70), Expect = 9.8
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +1

Query: 169 ECCSSLEQESTIKERGLQRQRAKNRLSGRGPLREPSP*SSFLGSRCRKA 315
           E  SS    S +++R +QR+       G  PL +PS  S  LG  CR+A
Sbjct: 32  EVLSSHSHSSGLQDRPVQRRSESPSRDGLLPLNKPSRESRLLGRACRQA 80


>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
           spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
           spumigena CCY 9414
          Length = 72

 Score = 32.3 bits (70), Expect = 9.8
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +2

Query: 2   RPSQQLRSCNGEWQIV 49
           RPSQQLRS NGEW+++
Sbjct: 57  RPSQQLRSLNGEWRLM 72


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,848,870
Number of Sequences: 1657284
Number of extensions: 11356325
Number of successful extensions: 25698
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 24975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25686
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46051731393
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)