Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0227.Seq
         (628 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.         30   2.2  
AE014297-2568|AAF55584.1|  950|Drosophila melanogaster CG7709-PA...    28   9.0  

>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
          Length = 1494

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = -1

Query: 244  DGFSPFDVGVHVL**WTLVPNWNNTQPYLGLFF*FIRDFADFGLLVKK*ADLTK 83
            DG  P D G+  +  + +  N +  Q +LGL   F R   DF  L K   D+ K
Sbjct: 923  DGIMPNDKGIEAIKNFPIPNNVHTVQSFLGLCSYFRRFIKDFSRLAKPLHDILK 976


>AE014297-2568|AAF55584.1|  950|Drosophila melanogaster CG7709-PA
           protein.
          Length = 950

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
 Frame = -2

Query: 516 SPKVPPDAPCSGALSAAGVVVTRSVSRYTCQRPSARSFRFLPFL--SRHVRRLSPSSSKS 343
           +P     AP S +LS+ G   +   S Y    PS+ S    P    + +   ++P SS  
Sbjct: 766 APSSSYSAP-SSSLSSGGPYPSAPSSSYAAPSPSSNSGGPYPAAPSNSYSAPIAPPSSSY 824

Query: 342 GAPFRVPI*CFTAP 301
           GAP   P   F+AP
Sbjct: 825 GAPASGPSPSFSAP 838


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,394,777
Number of Sequences: 53049
Number of extensions: 524320
Number of successful extensions: 1063
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)