Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0226.Seq
(544 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X86446-1|CAA60167.1| 900|Homo sapiens 55.11 protein protein. 108 1e-23
U18247-1|AAA57339.1| 591|Homo sapiens p67 protein. 108 1e-23
D78151-1|BAA11226.1| 908|Homo sapiens human 26S proteasome subu... 108 1e-23
BC002997-1|AAH02997.1| 908|Homo sapiens proteasome (prosome, ma... 108 1e-23
BC002368-1|AAH02368.1| 908|Homo sapiens proteasome (prosome, ma... 108 1e-23
AB209843-1|BAD93080.1| 913|Homo sapiens proteasome 26S non-ATPa... 108 1e-23
BT009736-1|AAP88738.1| 908|Homo sapiens proteasome (prosome, ma... 105 1e-22
BC007897-1|AAH07897.1| 908|Homo sapiens proteasome (prosome, ma... 105 1e-22
U12596-1|AAA87705.1| 853|Homo sapiens tumor necrosis factor typ... 103 5e-22
AK000917-1|BAA91423.1| 441|Homo sapiens protein ( Homo sapiens ... 33 0.65
BC041792-1|AAH41792.1| 562|Homo sapiens AT rich interactive dom... 33 0.85
AF116846-1|AAD09133.1| 560|Homo sapiens bright and dead ringer ... 33 0.85
AB208830-1|BAD92067.1| 476|Homo sapiens AT rich interactive dom... 33 0.85
BC029864-1|AAH29864.1| 340|Homo sapiens hyaluronan and proteogl... 32 1.5
AL365181-11|CAI13055.1| 340|Homo sapiens hyaluronan and proteog... 32 1.5
AL365181-10|CAI13054.1| 185|Homo sapiens hyaluronan and proteog... 32 1.5
AB049061-1|BAB17669.1| 340|Homo sapiens brain link protein-1 pr... 32 1.5
AB049054-1|BAB17662.1| 340|Homo sapiens brain link protein-1 pr... 32 1.5
BC039867-1|AAH39867.1| 446|Homo sapiens WD repeat domain, phosp... 31 3.4
AY691424-1|AAV80760.1| 447|Homo sapiens WIPI-1 alpha protein. 31 3.4
AL136089-7|CAI20013.1| 448|Homo sapiens molybdenum cofactor syn... 29 8.0
>X86446-1|CAA60167.1| 900|Homo sapiens 55.11 protein protein.
Length = 900
Score = 108 bits (259), Expect = 1e-23
Identities = 47/88 (53%), Positives = 65/88 (73%)
Frame = +3
Query: 249 PALSVIEVLNIYSHDSDNDVAYNSIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P L++++ L+ +SHD+D +V+YNSIFAMG+VG+GTNN YH K P +LFM
Sbjct: 693 PRLNILDTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFM 752
Query: 429 VLLAQGLCHAGKGTVTLCPAHANRRLLT 512
V LAQGL H GKGT+TLCP H++R+L++
Sbjct: 753 VRLAQGLTHLGKGTLTLCPYHSDRQLMS 780
Score = 75.4 bits (177), Expect = 1e-13
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +1
Query: 94 QAVATLGVAVIALAAETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
Q VA LG+A+IA+ E GAEM R FG L RYGEP +RRAVPLA+AL SVSNP
Sbjct: 641 QGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNP 693
>U18247-1|AAA57339.1| 591|Homo sapiens p67 protein.
Length = 591
Score = 108 bits (259), Expect = 1e-23
Identities = 47/88 (53%), Positives = 65/88 (73%)
Frame = +3
Query: 249 PALSVIEVLNIYSHDSDNDVAYNSIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P L++++ L+ +SHD+D +V+YNSIFAMG+VG+GTNN YH K P +LFM
Sbjct: 384 PRLNILDTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFM 443
Query: 429 VLLAQGLCHAGKGTVTLCPAHANRRLLT 512
V LAQGL H GKGT+TLCP H++R+L++
Sbjct: 444 VRLAQGLTHLGKGTLTLCPYHSDRQLMS 471
Score = 43.6 bits (98), Expect = 5e-04
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +1
Query: 184 RYGEPVVRRAVPLAIALCSVSNP 252
RYGEP +RRAVPLA+AL SVSNP
Sbjct: 362 RYGEPTLRRAVPLALALISVSNP 384
>D78151-1|BAA11226.1| 908|Homo sapiens human 26S proteasome subunit
p97 protein.
Length = 908
Score = 108 bits (259), Expect = 1e-23
Identities = 47/88 (53%), Positives = 65/88 (73%)
Frame = +3
Query: 249 PALSVIEVLNIYSHDSDNDVAYNSIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P L++++ L+ +SHD+D +V+YNSIFAMG+VG+GTNN YH K P +LFM
Sbjct: 702 PRLNILDTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFM 761
Query: 429 VLLAQGLCHAGKGTVTLCPAHANRRLLT 512
V LAQGL H GKGT+TLCP H++R+L++
Sbjct: 762 VRLAQGLTHLGKGTLTLCPYHSDRQLMS 789
Score = 75.4 bits (177), Expect = 1e-13
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +1
Query: 94 QAVATLGVAVIALAAETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
Q VA LG+A+IA+ E GAEM R FG L RYGEP +RRAVPLA+AL SVSNP
Sbjct: 650 QGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNP 702
>BC002997-1|AAH02997.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 108 bits (259), Expect = 1e-23
Identities = 47/88 (53%), Positives = 65/88 (73%)
Frame = +3
Query: 249 PALSVIEVLNIYSHDSDNDVAYNSIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P L++++ L+ +SHD+D +V+YNSIFAMG+VG+GTNN YH K P +LFM
Sbjct: 702 PRLNILDTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFM 761
Query: 429 VLLAQGLCHAGKGTVTLCPAHANRRLLT 512
V LAQGL H GKGT+TLCP H++R+L++
Sbjct: 762 VRLAQGLTHLGKGTLTLCPYHSDRQLMS 789
Score = 75.4 bits (177), Expect = 1e-13
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +1
Query: 94 QAVATLGVAVIALAAETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
Q VA LG+A+IA+ E GAEM R FG L RYGEP +RRAVPLA+AL SVSNP
Sbjct: 650 QGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNP 702
>BC002368-1|AAH02368.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 108 bits (259), Expect = 1e-23
Identities = 47/88 (53%), Positives = 65/88 (73%)
Frame = +3
Query: 249 PALSVIEVLNIYSHDSDNDVAYNSIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P L++++ L+ +SHD+D +V+YNSIFAMG+VG+GTNN YH K P +LFM
Sbjct: 702 PRLNILDTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFM 761
Query: 429 VLLAQGLCHAGKGTVTLCPAHANRRLLT 512
V LAQGL H GKGT+TLCP H++R+L++
Sbjct: 762 VRLAQGLTHLGKGTLTLCPYHSDRQLMS 789
Score = 75.4 bits (177), Expect = 1e-13
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +1
Query: 94 QAVATLGVAVIALAAETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
Q VA LG+A+IA+ E GAEM R FG L RYGEP +RRAVPLA+AL SVSNP
Sbjct: 650 QGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNP 702
>AB209843-1|BAD93080.1| 913|Homo sapiens proteasome 26S non-ATPase
subunit 2 variant protein.
Length = 913
Score = 108 bits (259), Expect = 1e-23
Identities = 47/88 (53%), Positives = 65/88 (73%)
Frame = +3
Query: 249 PALSVIEVLNIYSHDSDNDVAYNSIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P L++++ L+ +SHD+D +V+YNSIFAMG+VG+GTNN YH K P +LFM
Sbjct: 707 PRLNILDTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFM 766
Query: 429 VLLAQGLCHAGKGTVTLCPAHANRRLLT 512
V LAQGL H GKGT+TLCP H++R+L++
Sbjct: 767 VRLAQGLTHLGKGTLTLCPYHSDRQLMS 794
Score = 75.4 bits (177), Expect = 1e-13
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +1
Query: 94 QAVATLGVAVIALAAETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
Q VA LG+A+IA+ E GAEM R FG L RYGEP +RRAVPLA+AL SVSNP
Sbjct: 655 QGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNP 707
>BT009736-1|AAP88738.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 105 bits (251), Expect = 1e-22
Identities = 46/88 (52%), Positives = 64/88 (72%)
Frame = +3
Query: 249 PALSVIEVLNIYSHDSDNDVAYNSIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P L++++ L+ +SHD+D +V+Y SIFAMG+VG+GTNN YH K P +LFM
Sbjct: 702 PRLNILDTLSKFSHDADPEVSYYSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFM 761
Query: 429 VLLAQGLCHAGKGTVTLCPAHANRRLLT 512
V LAQGL H GKGT+TLCP H++R+L++
Sbjct: 762 VRLAQGLTHLGKGTLTLCPYHSDRQLMS 789
Score = 75.4 bits (177), Expect = 1e-13
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +1
Query: 94 QAVATLGVAVIALAAETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
Q VA LG+A+IA+ E GAEM R FG L RYGEP +RRAVPLA+AL SVSNP
Sbjct: 650 QGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNP 702
>BC007897-1|AAH07897.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 105 bits (251), Expect = 1e-22
Identities = 46/88 (52%), Positives = 64/88 (72%)
Frame = +3
Query: 249 PALSVIEVLNIYSHDSDNDVAYNSIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P L++++ L+ +SHD+D +V+Y SIFAMG+VG+GTNN YH K P +LFM
Sbjct: 702 PRLNILDTLSKFSHDADPEVSYYSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFM 761
Query: 429 VLLAQGLCHAGKGTVTLCPAHANRRLLT 512
V LAQGL H GKGT+TLCP H++R+L++
Sbjct: 762 VRLAQGLTHLGKGTLTLCPYHSDRQLMS 789
Score = 75.4 bits (177), Expect = 1e-13
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +1
Query: 94 QAVATLGVAVIALAAETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
Q VA LG+A+IA+ E GAEM R FG L RYGEP +RRAVPLA+AL SVSNP
Sbjct: 650 QGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNP 702
>U12596-1|AAA87705.1| 853|Homo sapiens tumor necrosis factor type 1
receptor associated protein protein.
Length = 853
Score = 103 bits (246), Expect = 5e-22
Identities = 47/90 (52%), Positives = 65/90 (72%), Gaps = 2/90 (2%)
Frame = +3
Query: 249 PALSVIEVLNIYSHDSDNDVAYNSIFAMGL--VGAGTNNXXXXXXXXXXXXYHGKSPVHL 422
P L++++ L+ +SHD+D +V+YNSIFAMG+ VG+GTNN YH K P +L
Sbjct: 644 PRLNILDTLSKFSHDADPEVSYNSIFAMGMGMVGSGTNNARLAAMLRQLAQYHAKDPNNL 703
Query: 423 FMVLLAQGLCHAGKGTVTLCPAHANRRLLT 512
FMV LAQGL H GKGT+TLCP H++R+L++
Sbjct: 704 FMVRLAQGLTHLGKGTLTLCPYHSDRQLMS 733
Score = 75.4 bits (177), Expect = 1e-13
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +1
Query: 94 QAVATLGVAVIALAAETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
Q VA LG+A+IA+ E GAEM R FG L RYGEP +RRAVPLA+AL SVSNP
Sbjct: 592 QGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNP 644
>AK000917-1|BAA91423.1| 441|Homo sapiens protein ( Homo sapiens
cDNA FLJ10055 fis, clone HEMBA1001326. ).
Length = 441
Score = 33.1 bits (72), Expect = 0.65
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = -3
Query: 266 DDGECGLDTEHRAMASGTARRTTGSPYLPSCPKMRVHISAPVSAANAMT 120
D GEC L HR + SGT + PS P+ A SA++A T
Sbjct: 342 DGGECVLIKTHRLLGSGTTEENKENDLRPSLPQSYAATVARPSASSAST 390
>BC041792-1|AAH41792.1| 562|Homo sapiens AT rich interactive domain
3B (BRIGHT-like) protein.
Length = 562
Score = 32.7 bits (71), Expect = 0.85
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = -3
Query: 224 ASGTARRTTGSPYLPSCPKMRVHISAPVSAANAMTATPRVATACT 90
A+ TA G+P L S PK+R I S++ T++PR++ A T
Sbjct: 342 AAATAAAAAGAPALLSPPKIRFPILGLGSSSGTNTSSPRISPATT 386
>AF116846-1|AAD09133.1| 560|Homo sapiens bright and dead ringer
gene product homologous protein Bdp protein.
Length = 560
Score = 32.7 bits (71), Expect = 0.85
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = -3
Query: 224 ASGTARRTTGSPYLPSCPKMRVHISAPVSAANAMTATPRVATACT 90
A+ TA G+P L S PK+R I S++ T++PR++ A T
Sbjct: 341 AAATAAAAAGAPALLSPPKIRFPILGLGSSSGTNTSSPRISPATT 385
>AB208830-1|BAD92067.1| 476|Homo sapiens AT rich interactive domain
3B (BRIGHT- like) protein variant protein.
Length = 476
Score = 32.7 bits (71), Expect = 0.85
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = -3
Query: 224 ASGTARRTTGSPYLPSCPKMRVHISAPVSAANAMTATPRVATACT 90
A+ TA G+P L S PK+R I S++ T++PR++ A T
Sbjct: 382 AAATAAAAAGAPALLSPPKIRFPILGLGSSSGTNTSSPRISPATT 426
>BC029864-1|AAH29864.1| 340|Homo sapiens hyaluronan and
proteoglycan link protein 2 protein.
Length = 340
Score = 31.9 bits (69), Expect = 1.5
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -2
Query: 243 HRAQGDGERHGAPHYRLPVPTKLSEDAGAHFGARFSCQC 127
H+AQGD H PHY LP + E +H GA + C
Sbjct: 22 HKAQGDPASHPGPHYLLP---PIHEVIHSHRGATATLPC 57
>AL365181-11|CAI13055.1| 340|Homo sapiens hyaluronan and
proteoglycan link protein 2 protein.
Length = 340
Score = 31.9 bits (69), Expect = 1.5
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -2
Query: 243 HRAQGDGERHGAPHYRLPVPTKLSEDAGAHFGARFSCQC 127
H+AQGD H PHY LP + E +H GA + C
Sbjct: 22 HKAQGDPASHPGPHYLLP---PIHEVIHSHRGATATLPC 57
>AL365181-10|CAI13054.1| 185|Homo sapiens hyaluronan and
proteoglycan link protein 2 protein.
Length = 185
Score = 31.9 bits (69), Expect = 1.5
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -2
Query: 243 HRAQGDGERHGAPHYRLPVPTKLSEDAGAHFGARFSCQC 127
H+AQGD H PHY LP + E +H GA + C
Sbjct: 22 HKAQGDPASHPGPHYLLP---PIHEVIHSHRGATATLPC 57
>AB049061-1|BAB17669.1| 340|Homo sapiens brain link protein-1
protein.
Length = 340
Score = 31.9 bits (69), Expect = 1.5
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -2
Query: 243 HRAQGDGERHGAPHYRLPVPTKLSEDAGAHFGARFSCQC 127
H+AQGD H PHY LP + E +H GA + C
Sbjct: 22 HKAQGDPASHPGPHYLLP---PIHEVIHSHRGATATLPC 57
>AB049054-1|BAB17662.1| 340|Homo sapiens brain link protein-1
protein.
Length = 340
Score = 31.9 bits (69), Expect = 1.5
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -2
Query: 243 HRAQGDGERHGAPHYRLPVPTKLSEDAGAHFGARFSCQC 127
H+AQGD H PHY LP + E +H GA + C
Sbjct: 22 HKAQGDPASHPGPHYLLP---PIHEVIHSHRGATATLPC 57
>BC039867-1|AAH39867.1| 446|Homo sapiens WD repeat domain,
phosphoinositide interacting 1 protein.
Length = 446
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -3
Query: 266 DDGECGLDTEHRAMASGTARRTTGSPYLPSCPKMRVHISAPVSAANAMT 120
D GEC L H + SGT + PS P+ A SA++A T
Sbjct: 347 DGGECVLIKTHSLLGSGTTEENKENDLRPSLPQSYAATVARPSASSAST 395
>AY691424-1|AAV80760.1| 447|Homo sapiens WIPI-1 alpha protein.
Length = 447
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -3
Query: 266 DDGECGLDTEHRAMASGTARRTTGSPYLPSCPKMRVHISAPVSAANAMT 120
D GEC L H + SGT + PS P+ A SA++A T
Sbjct: 348 DGGECVLIKTHSLLGSGTTEENKENDLRPSLPQSYAATVARPSASSAST 396
>AL136089-7|CAI20013.1| 448|Homo sapiens molybdenum cofactor
synthesis 1 protein.
Length = 448
Score = 29.5 bits (63), Expect = 8.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 260 GECGLDTEHRAMASGTARRTTGSPYLPSCP 171
G CG + HRA G +R G+ L +CP
Sbjct: 337 GRCGQEARHRAGGCGFSRGPPGTGSLQACP 366
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,754,580
Number of Sequences: 237096
Number of extensions: 1256062
Number of successful extensions: 3472
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3471
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -