Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0224.Seq
(817 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08
SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08
SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 8e-08
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012) 47 2e-05
SB_44028| Best HMM Match : RVT_1 (HMM E-Value=1.3) 35 0.069
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 33 0.37
SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.37
SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40) 31 0.84
SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_25615| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-10) 31 0.84
SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 31 0.84
SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_30241| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_3924| Best HMM Match : E-MAP-115 (HMM E-Value=4.2) 29 3.4
SB_31092| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71) 28 7.9
SB_29682| Best HMM Match : PKD_channel (HMM E-Value=0.0011) 28 7.9
>SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 56.4 bits (130), Expect = 3e-08
Identities = 28/58 (48%), Positives = 36/58 (62%)
Frame = +1
Query: 286 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG 459
+ KQI E+ AS Y++M +F D V PGF K F +A+ EEREHA KL + L RG
Sbjct: 150 VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFMEASHEEREHAEKLAKFQLQRG 207
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/92 (28%), Positives = 45/92 (48%)
Frame = +3
Query: 492 VQGPRHTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYK 671
++ P W G ++ AL LE V ++ ++ K E D + D+L +L EQ +
Sbjct: 215 IKRPERDDWGCGQDVIQAALDLEKHVNQALHDLHKVAEKH-GDSQMQDWLESHYLTEQVE 273
Query: 672 GQRDLAGKASTLKKMMDKHAALGDFIFRQEIL 767
++LAG + LK++ LG+F F + L
Sbjct: 274 AIKELAGHMTNLKRV---GPGLGEFQFDKHTL 302
>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 55.2 bits (127), Expect = 6e-08
Identities = 28/58 (48%), Positives = 35/58 (60%)
Frame = +1
Query: 286 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG 459
+ KQI E+ AS Y++M +F D V PGF K F A+ EEREHA KL + L RG
Sbjct: 135 VNKQINLELYASYVYMSMAYHFDRDDVALPGFHKYFMKASHEEREHAEKLAKFQLQRG 192
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/87 (29%), Positives = 44/87 (50%)
Frame = +3
Query: 492 VQGPRHTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYK 671
++ P W G A++ AL LE V ++ ++ K E D + D+L +L EQ +
Sbjct: 200 IKRPERDDWGCGQDAIQAALDLEKHVNQALLDLHKVAEKH-GDSQMQDWLESHYLTEQVE 258
Query: 672 GQRDLAGKASTLKKMMDKHAALGDFIF 752
++LAG + LK++ LG+F F
Sbjct: 259 AIKELAGHLTNLKRV---GPGLGEFQF 282
>SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 55.2 bits (127), Expect = 6e-08
Identities = 28/58 (48%), Positives = 35/58 (60%)
Frame = +1
Query: 286 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG 459
+ KQI E+ AS Y++M +F D V PGF K F A+ EEREHA KL + L RG
Sbjct: 18 VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFIKASHEEREHAEKLAKFQLQRG 75
>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 54.8 bits (126), Expect = 8e-08
Identities = 29/64 (45%), Positives = 37/64 (57%)
Frame = +1
Query: 268 QTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYL 447
+ C + KQI E+ AS YL+M +F D V PGF K F A+ EEREHA KL+ +
Sbjct: 197 EECEAGINKQINLELYASYAYLSMAFHFDRDDVALPGFHKYFLKASHEEREHAEKLMKFQ 256
Query: 448 LMRG 459
RG
Sbjct: 257 NERG 260
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/95 (29%), Positives = 51/95 (53%)
Frame = +3
Query: 486 HHVQGPRHTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQ 665
HH+ P W +G A+ AL LE ++ +++ ++ + +++ D + D+L FL EQ
Sbjct: 46 HHIMKPCRDHWGNGLMAMRDALYLEKEINHALLDLHQVADTN-RDPQVQDFLESNFLGEQ 104
Query: 666 YKGQRDLAGKASTLKKMMDKHAALGDFIFRQEILG 770
+ LA STL+++ LG++ F +E LG
Sbjct: 105 VDSIKTLANYVSTLQRL---GGGLGEYQFDKETLG 136
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/93 (27%), Positives = 48/93 (51%)
Frame = +3
Query: 492 VQGPRHTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYK 671
++ P W G +++ AL LE V ++ ++ K E D + D++ G FL EQ +
Sbjct: 268 IKKPEKDEWGCGMDSIQVALDLEKHVNQALLDLHKIAEKH-GDAQMTDFIEGNFLTEQVE 326
Query: 672 GQRDLAGKASTLKKMMDKHAALGDFIFRQEILG 770
++LAG + LK++ LG++ + E +G
Sbjct: 327 AIKELAGHLTNLKRV---GPGLGEYQYDHETIG 356
Score = 36.3 bits (80), Expect = 0.030
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1
Query: 343 AYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG 459
A+F D ++ PGFA F AA EE HA +++L RG
Sbjct: 2 AHFGRDDIHLPGFAAFFKKAAEEEYTHAHMFMEFLNKRG 40
>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 48.8 bits (111), Expect = 5e-06
Identities = 25/55 (45%), Positives = 31/55 (56%)
Frame = +1
Query: 268 QTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATK 432
+ C + KQI E+ AS Y +M YF + V+ PGF K F A EEREHA K
Sbjct: 10 EECEAGINKQINLELYASYVYTSMACYFDREDVHLPGFHKFFKKQAHEEREHAEK 64
>SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)
Length = 126
Score = 47.2 bits (107), Expect = 2e-05
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +1
Query: 286 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKL 465
+ KQI +E+ A YL+M +F D +N PGF K F A+ EE EHA +++ ++ K
Sbjct: 38 INKQINKELYAHYTYLSMAFHFDRDDINLPGFNKFFKKASKEEWEHA-QMVKTAALQTKC 96
Query: 466 TGSVT---NLITYRAPATRRG 519
+T L + A T+RG
Sbjct: 97 YRKLTIVWLLFQFMAYLTKRG 117
>SB_44028| Best HMM Match : RVT_1 (HMM E-Value=1.3)
Length = 249
Score = 35.1 bits (77), Expect = 0.069
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +1
Query: 346 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLI 489
+F++ +N+PG ++ FDAA+E + T L YLL T S+T ++
Sbjct: 30 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKYLLHGPDCTNSLTGVL 75
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 32.7 bits (71), Expect = 0.37
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +3
Query: 519 ESGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLS 644
ES A+ LEH L+ E++ N +R+ T SS N+Y V+YL+
Sbjct: 1823 ESKAADLEHRLETEANDKNKLRQENITLASSLNEYK-VNYLT 1863
>SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 32.7 bits (71), Expect = 0.37
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +1
Query: 346 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVT---NLITYRAPATRR 516
+F D +N PGF K F A+ EE EHA +++ ++ K +T L + A T+R
Sbjct: 32 HFDRDDINLPGFNKFFKKASKEEWEHA-QMVKTAALQTKCYRKLTIVWLLFQFMAYLTKR 90
Query: 517 G 519
G
Sbjct: 91 G 91
>SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1379
Score = 31.5 bits (68), Expect = 0.84
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 346 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLI 489
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 350 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 395
>SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40)
Length = 1740
Score = 31.5 bits (68), Expect = 0.84
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 346 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLI 489
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 868 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 913
>SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 31.5 bits (68), Expect = 0.84
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 677 ARPRRQGLDPQEDDGQARRPRRFHLST 757
ARPR+ PQ+ D QA RPR+ L T
Sbjct: 40 ARPRQASRKPQDQDKQAARPRQASLKT 66
>SB_25615| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-10)
Length = 475
Score = 31.5 bits (68), Expect = 0.84
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 346 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLI 489
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 151 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 196
>SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1244
Score = 31.5 bits (68), Expect = 0.84
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 346 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLI 489
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 667 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 712
>SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1515
Score = 31.5 bits (68), Expect = 0.84
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 346 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTNLI 489
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 945 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 990
>SB_30241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 31.1 bits (67), Expect = 1.1
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Frame = +2
Query: 527 RISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRLLVRGIPRRT---------VQGPA 679
R PR RP + ++ HQ+ R + +R PP RG PR++ QG
Sbjct: 53 RRRPRPRPNSEGKEGEEADHEHQEERPRGRRPPPWWRRRRGPPRKSDSAEHSGADSQGEG 112
Query: 680 RPRRQGLDPQEDDGQARRPRRFHL-STRNPRIE 775
+++G +E + + RRPRR +R PR E
Sbjct: 113 N-KQEGSAEEEREQRPRRPRRPRFRKSRQPRSE 144
>SB_3924| Best HMM Match : E-MAP-115 (HMM E-Value=4.2)
Length = 344
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Frame = +2
Query: 533 SPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRLLVRGIPRRTVQGPARPRRQG----- 697
S + + QAG P H+ Q P + + P+ PARPR+
Sbjct: 251 SHKTKGQAGRKIKISKPQNHKQAPRPRQASPKTK--GQASPKTKSTKPARPRQASPKAKT 308
Query: 698 LDPQEDDGQARRPRRFHLSTRNPR 769
PQ+ D Q RPR+ L T+ +
Sbjct: 309 SKPQDQDKQVARPRQSSLKTKTSK 332
>SB_31092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1032
Score = 28.3 bits (60), Expect = 7.9
Identities = 32/141 (22%), Positives = 51/141 (36%), Gaps = 1/141 (0%)
Frame = +3
Query: 222 VTSAPSPSGMSAHHGADLLQHDEETDPGGSGRVNPVLSHGGLLLDRYGEPPRLREAILRC 401
V +P + G + ++EE P S V S L +GE P +L
Sbjct: 310 VIDSPLTDPLPDEEGGKVTSNEEEVVPAVSQGVVEATSPSQQSLHDFGECPAWLTDLLEG 369
Query: 402 CD*RTRARDQAH*LPAHEGQA-DRLRNQPHHVQGPRHTSWESGASALEHALKLESDVTNS 578
D +T + + LP + A + L V+ P S + A H L +V N+
Sbjct: 370 DDEKTVSSEATDELPLPDPNAIEELLALMDEVKSPATDSLIAPACETNHISTLAGEVDNT 429
Query: 579 IREVIKTCESSFNDYHLVDYL 641
T + S D ++ L
Sbjct: 430 AAHPNNTYKLSIADCSTLEEL 450
>SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71)
Length = 1281
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 674 PARPRRQGLDPQEDDGQARRPRRFHLSTR 760
P + RR+ PQ+ D QA RPR+ T+
Sbjct: 1053 PRQARRKASKPQDQDKQAARPRQASRKTK 1081
>SB_29682| Best HMM Match : PKD_channel (HMM E-Value=0.0011)
Length = 318
Score = 28.3 bits (60), Expect = 7.9
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +3
Query: 567 VTNSIREVIKTCESSFNDYHLVDYLSGEFLDE 662
+ ++ EV E NDY ++DY+ +F ++
Sbjct: 187 INEALEEVSSDAEKQANDYEIIDYMMHKFKEQ 218
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,418,567
Number of Sequences: 59808
Number of extensions: 451069
Number of successful extensions: 1355
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1351
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2275631710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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