Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0224.Seq
         (817 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    30   0.098
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    26   1.6  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   4.9  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   4.9  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   6.4  
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         24   6.4  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 29.9 bits (64), Expect = 0.098
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 518 GERRISPRARPQAGE*RHQQHPGGHQDLREQLQR 619
           GER + P+ R Q  + +HQQ     Q  R+Q QR
Sbjct: 294 GERYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQR 327


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +3

Query: 234 PSPSGMSAHHGADLLQHDEETDPGGSGRVNPVLSHGGLLLDRYGEPPRLREA 389
           P P+  SA +    L + + T P G+G      S     L R   PP +R +
Sbjct: 180 PDPAKASAPNAGKSLSNIQPTPPKGAGATGTQHSDQQQELPRPSSPPAIRRS 231


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 15/51 (29%), Positives = 18/51 (35%)
 Frame = +3

Query: 426 DQAH*LPAHEGQADRLRNQPHHVQGPRHTSWESGASALEHALKLESDVTNS 578
           DQ H L   + Q     +Q H  QG  H    S  +   H   L S    S
Sbjct: 633 DQQHLLQQQQQQQQHQHHQAHQHQGQHHAQHHSNGT--HHGPSLMSSARES 681


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = -1

Query: 616 LKLLSQVLMTSRMLLVTSLSSL 551
           LKLL+ V MTS+M+L+T L  L
Sbjct: 897 LKLLA-VCMTSQMMLITQLMPL 917


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +3

Query: 528 ASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYK 671
           ASA   A++  + V    +E      S  ND+++ D++SG   + + K
Sbjct: 835 ASAPFLAIRTLNQVLEDNKEKYPLAASRINDFYVDDFISGADSENEAK 882


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 270 DLLQHDEETDPGGSGRVNPVLS 335
           D LQ +E   P G+GR+  V S
Sbjct: 98  DQLQQEETDAPAGAGRIRKVRS 119


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,268
Number of Sequences: 2352
Number of extensions: 14490
Number of successful extensions: 38
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)