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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0224.Seq
         (817 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ...    52   3e-07
At3g56090.1 68416.m06234 ferritin, putative similar to ferritin ...    49   3e-06
At3g11050.1 68416.m01333 ferritin, putative similar to ferritin ...    47   1e-05
At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin...    47   2e-05
At3g61010.1 68416.m06826 glycosyl hydrolase family protein 85 hy...    40   0.002
At2g32240.1 68415.m03940 expressed protein contains Pfam profile...    32   0.40 
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex...    32   0.40 
At4g02010.1 68417.m00271 protein kinase family protein contains ...    28   6.4  
At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protei...    28   8.5  
At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protei...    28   8.5  
At2g19410.1 68415.m02264 protein kinase family protein contains ...    28   8.5  
At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ...    28   8.5  
At1g16610.1 68414.m01989 arginine/serine-rich protein, putative ...    28   8.5  

>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
           subunit cowpea2 precursor [Vigna unguiculata]
           GI:2970654; contains Pfam profile PF00210: Ferritin-like
           domain
          Length = 259

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 27/62 (43%), Positives = 35/62 (56%)
 Frame = +1

Query: 274 CYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLM 453
           C   + +QI  E   S  Y AM AYF  D +   G AK F +++ EEREHA KL++Y   
Sbjct: 97  CEAAINEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNK 156

Query: 454 RG 459
           RG
Sbjct: 157 RG 158



 Score = 35.1 bits (77), Expect = 0.056
 Identities = 23/77 (29%), Positives = 39/77 (50%)
 Frame = +3

Query: 537 LEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKM 716
           +E AL LE  V   +   + +  S  ND HL D++  EFL EQ +  + ++   + L+++
Sbjct: 185 MELALSLEKLVNEKLLN-LHSVASKNNDVHLADFIESEFLTEQVEAIKLISEYVAQLRRV 243

Query: 717 MDKHAALGDFIFRQEIL 767
              H   G + F Q +L
Sbjct: 244 GKGH---GTWHFNQMLL 257


>At3g56090.1 68416.m06234 ferritin, putative similar to ferritin
           subunit cowpea2 precursor [Vigna unguiculata]
           GI:2970654; contains Pfam profile PF00210: Ferritin-like
           domain
          Length = 259

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 26/62 (41%), Positives = 34/62 (54%)
 Frame = +1

Query: 274 CYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLM 453
           C   + +QI  E   S  Y A+ AYF  D V   G AK F +++ EEREHA  L++Y   
Sbjct: 95  CEAAVNEQINVEYNVSYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNK 154

Query: 454 RG 459
           RG
Sbjct: 155 RG 156


>At3g11050.1 68416.m01333 ferritin, putative similar to ferritin
           subunit cowpea2 precursor GI:2970654 (Vigna
           unguiculata); contains Pfam profile PF00210:
           Ferritin-like domain
          Length = 253

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 25/55 (45%), Positives = 30/55 (54%)
 Frame = +1

Query: 295 QIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG 459
           QI  E   S  Y A+ AYF  D V   GFAK F D++ EER HA   ++Y   RG
Sbjct: 96  QINVEYNVSYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRG 150



 Score = 33.5 bits (73), Expect = 0.17
 Identities = 20/65 (30%), Positives = 35/65 (53%)
 Frame = +3

Query: 534 ALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKK 713
           A+E AL LE  +TN     +++     ND  LVD++  EFL EQ +  + ++   + L++
Sbjct: 176 AMELALSLEK-LTNEKLLKLQSVGVKNNDVQLVDFVESEFLGEQVEAIKKISEYVAQLRR 234

Query: 714 MMDKH 728
           +   H
Sbjct: 235 IGKGH 239


>At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin
           [Arabidopsis thaliana] GI:1246401, GI:8163920
          Length = 255

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 24/59 (40%), Positives = 33/59 (55%)
 Frame = +1

Query: 283 MMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG 459
           ++ +QI  E   S  Y +M AYF  D V   G AK F +++ EER HA K ++Y   RG
Sbjct: 97  VINEQINVEYNVSYVYHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRG 155


>At3g61010.1 68416.m06826 glycosyl hydrolase family protein 85
           hypothetical protein F9F8.14 - Arabidopsis thaliana,
           EMBL:AC009991
          Length = 355

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 20/49 (40%), Positives = 26/49 (53%)
 Frame = +1

Query: 298 IQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDY 444
           I  E   S  Y A+ AY   D V   GF K F D++ EER +A K ++Y
Sbjct: 297 IDVEYNVSYVYHALDAYIERDNVGLKGFTKFFNDSSLEERGYAEKFMEY 345


>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
           PF04508 viral A-type inclusion protein repeat
          Length = 775

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 31/121 (25%), Positives = 48/121 (39%)
 Frame = +3

Query: 375 RLREAILRCCD*RTRARDQAH*LPAHEGQADRLRNQPHHVQGPRHTSWESGASALEHALK 554
           RL EAI R     T + D    L  HE Q +  +   H   G   T        LE AL 
Sbjct: 368 RLEEAIERFNQKETESSDLVEKLKTHENQIEEYKKLAHEASGVADTR----KVELEDALS 423

Query: 555 LESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAA 734
              ++ ++I E+   C+        ++  SG+  +   K   +LA   S   ++  K +A
Sbjct: 424 KLKNLESTIEELGAKCQG-------LEKESGDLAEVNLKLNLELANHGSEANELQTKLSA 476

Query: 735 L 737
           L
Sbjct: 477 L 477


>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
           extensin family protein similar to extensin-like protein
           [Lycopersicon esculentum] gi|5917664|gb|AAD55979;
           contains leucine-rich repeats, Pfam:PF00560; contains
           proline rich extensin domains, INTERPRO:IPR002965
          Length = 727

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +2

Query: 650 IPRRTVQGPARPRRQGLDPQEDDGQARRPRRFHLSTRNPRIEHINILHVTPPLRS 814
           +P R V  P  P+     PQ +D   + P +F  S   P+  H +++H  PP  S
Sbjct: 401 VPTRPVHKPQPPKES---PQPNDPYNQSPVKFRRSPPPPQQPHHHVVHSPPPASS 452


>At4g02010.1 68417.m00271 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 725

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +3

Query: 252 SAHHGADLLQHDEETDPGGSGRVNPVLSHGGLLLDRYGEPPRLREAILRCC 404
           S+H     ++ + ++   G   + P  S  G+L D   +PP L  +I  CC
Sbjct: 103 SSHFSKPSMKRNAQSPGAGLADIAPAQSSNGVLPDALTQPP-LSPSISNCC 152


>At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protein
           similar to Nit protein 2 [Homo sapiens] GI:9367116;
           contains Pfam profile PF00795: hydrolase,
           carbon-nitrogen family
          Length = 294

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 522 SGASALEHALKLESDVTNSIREVIKTCESSFN 617
           S  S   H LKL S  T+++R +  +  SSFN
Sbjct: 37  SPRSITSHTLKLPSSSTSALRSISSSMASSFN 68


>At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protein
           similar to Nit protein 2 [Homo sapiens] GI:9367116;
           contains Pfam profile PF00795: hydrolase,
           carbon-nitrogen family
          Length = 369

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 522 SGASALEHALKLESDVTNSIREVIKTCESSFN 617
           S  S   H LKL S  T+++R +  +  SSFN
Sbjct: 37  SPRSITSHTLKLPSSSTSALRSISSSMASSFN 68


>At2g19410.1 68415.m02264 protein kinase family protein contains
           Pfam profile: PF00069 Eukaryotic protein kinase domain
          Length = 801

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 15/57 (26%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = +3

Query: 495 QGPRHTSWESGASALEHAL-KLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDE 662
           + P  TS +S    +E  + +L++++ +++ +  + CE  F+  + V  LS E+L+E
Sbjct: 297 RSPPETSRKSKKVEIEEEVERLKNELQSTVFKYKQACEELFSTQNKVKMLSTEYLNE 353


>At1g16610.2 68414.m01990 arginine/serine-rich protein, putative
           (SR45) similar to arginine/serine-rich protein
           GI:6601502 from [Arabidopsis thaliana]
          Length = 407

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +2

Query: 617 RLPPGRLLVRGIPRRTVQGPARPRRQGLDPQEDDGQARRPRRFHLSTRNP 766
           R PP R  +R   R  ++ P R R   + P++  G A R  R    + +P
Sbjct: 315 RSPPRRSPIRRRSRSPIRRPGRSRSSSISPRKGRGPAGRRGRSSSYSSSP 364


>At1g16610.1 68414.m01989 arginine/serine-rich protein, putative
           (SR45) similar to arginine/serine-rich protein
           GI:6601502 from [Arabidopsis thaliana]
          Length = 414

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +2

Query: 617 RLPPGRLLVRGIPRRTVQGPARPRRQGLDPQEDDGQARRPRRFHLSTRNP 766
           R PP R  +R   R  ++ P R R   + P++  G A R  R    + +P
Sbjct: 322 RSPPRRSPIRRRSRSPIRRPGRSRSSSISPRKGRGPAGRRGRSSSYSSSP 371


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,487,977
Number of Sequences: 28952
Number of extensions: 303903
Number of successful extensions: 832
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1863090400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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