BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= pg--0224.Seq (817 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ... 52 3e-07 At3g56090.1 68416.m06234 ferritin, putative similar to ferritin ... 49 3e-06 At3g11050.1 68416.m01333 ferritin, putative similar to ferritin ... 47 1e-05 At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin... 47 2e-05 At3g61010.1 68416.m06826 glycosyl hydrolase family protein 85 hy... 40 0.002 At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 32 0.40 At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 32 0.40 At4g02010.1 68417.m00271 protein kinase family protein contains ... 28 6.4 At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protei... 28 8.5 At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protei... 28 8.5 At2g19410.1 68415.m02264 protein kinase family protein contains ... 28 8.5 At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ... 28 8.5 At1g16610.1 68414.m01989 arginine/serine-rich protein, putative ... 28 8.5 >At2g40300.1 68415.m04964 ferritin, putative similar to ferritin subunit cowpea2 precursor [Vigna unguiculata] GI:2970654; contains Pfam profile PF00210: Ferritin-like domain Length = 259 Score = 52.4 bits (120), Expect = 3e-07 Identities = 27/62 (43%), Positives = 35/62 (56%) Frame = +1 Query: 274 CYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLM 453 C + +QI E S Y AM AYF D + G AK F +++ EEREHA KL++Y Sbjct: 97 CEAAINEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNK 156 Query: 454 RG 459 RG Sbjct: 157 RG 158 Score = 35.1 bits (77), Expect = 0.056 Identities = 23/77 (29%), Positives = 39/77 (50%) Frame = +3 Query: 537 LEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKM 716 +E AL LE V + + + S ND HL D++ EFL EQ + + ++ + L+++ Sbjct: 185 MELALSLEKLVNEKLLN-LHSVASKNNDVHLADFIESEFLTEQVEAIKLISEYVAQLRRV 243 Query: 717 MDKHAALGDFIFRQEIL 767 H G + F Q +L Sbjct: 244 GKGH---GTWHFNQMLL 257 >At3g56090.1 68416.m06234 ferritin, putative similar to ferritin subunit cowpea2 precursor [Vigna unguiculata] GI:2970654; contains Pfam profile PF00210: Ferritin-like domain Length = 259 Score = 49.2 bits (112), Expect = 3e-06 Identities = 26/62 (41%), Positives = 34/62 (54%) Frame = +1 Query: 274 CYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLM 453 C + +QI E S Y A+ AYF D V G AK F +++ EEREHA L++Y Sbjct: 95 CEAAVNEQINVEYNVSYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNK 154 Query: 454 RG 459 RG Sbjct: 155 RG 156 >At3g11050.1 68416.m01333 ferritin, putative similar to ferritin subunit cowpea2 precursor GI:2970654 (Vigna unguiculata); contains Pfam profile PF00210: Ferritin-like domain Length = 253 Score = 47.2 bits (107), Expect = 1e-05 Identities = 25/55 (45%), Positives = 30/55 (54%) Frame = +1 Query: 295 QIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG 459 QI E S Y A+ AYF D V GFAK F D++ EER HA ++Y RG Sbjct: 96 QINVEYNVSYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRG 150 Score = 33.5 bits (73), Expect = 0.17 Identities = 20/65 (30%), Positives = 35/65 (53%) Frame = +3 Query: 534 ALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKK 713 A+E AL LE +TN +++ ND LVD++ EFL EQ + + ++ + L++ Sbjct: 176 AMELALSLEK-LTNEKLLKLQSVGVKNNDVQLVDFVESEFLGEQVEAIKKISEYVAQLRR 234 Query: 714 MMDKH 728 + H Sbjct: 235 IGKGH 239 >At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin [Arabidopsis thaliana] GI:1246401, GI:8163920 Length = 255 Score = 46.8 bits (106), Expect = 2e-05 Identities = 24/59 (40%), Positives = 33/59 (55%) Frame = +1 Query: 283 MMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG 459 ++ +QI E S Y +M AYF D V G AK F +++ EER HA K ++Y RG Sbjct: 97 VINEQINVEYNVSYVYHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRG 155 >At3g61010.1 68416.m06826 glycosyl hydrolase family protein 85 hypothetical protein F9F8.14 - Arabidopsis thaliana, EMBL:AC009991 Length = 355 Score = 39.9 bits (89), Expect = 0.002 Identities = 20/49 (40%), Positives = 26/49 (53%) Frame = +1 Query: 298 IQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDY 444 I E S Y A+ AY D V GF K F D++ EER +A K ++Y Sbjct: 297 IDVEYNVSYVYHALDAYIERDNVGLKGFTKFFNDSSLEERGYAEKFMEY 345 >At2g32240.1 68415.m03940 expressed protein contains Pfam profile: PF04508 viral A-type inclusion protein repeat Length = 775 Score = 32.3 bits (70), Expect = 0.40 Identities = 31/121 (25%), Positives = 48/121 (39%) Frame = +3 Query: 375 RLREAILRCCD*RTRARDQAH*LPAHEGQADRLRNQPHHVQGPRHTSWESGASALEHALK 554 RL EAI R T + D L HE Q + + H G T LE AL Sbjct: 368 RLEEAIERFNQKETESSDLVEKLKTHENQIEEYKKLAHEASGVADTR----KVELEDALS 423 Query: 555 LESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAA 734 ++ ++I E+ C+ ++ SG+ + K +LA S ++ K +A Sbjct: 424 KLKNLESTIEELGAKCQG-------LEKESGDLAEVNLKLNLELANHGSEANELQTKLSA 476 Query: 735 L 737 L Sbjct: 477 L 477 >At2g15880.1 68415.m01820 leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 727 Score = 32.3 bits (70), Expect = 0.40 Identities = 17/55 (30%), Positives = 26/55 (47%) Frame = +2 Query: 650 IPRRTVQGPARPRRQGLDPQEDDGQARRPRRFHLSTRNPRIEHINILHVTPPLRS 814 +P R V P P+ PQ +D + P +F S P+ H +++H PP S Sbjct: 401 VPTRPVHKPQPPKES---PQPNDPYNQSPVKFRRSPPPPQQPHHHVVHSPPPASS 452 >At4g02010.1 68417.m00271 protein kinase family protein contains protein kinase domain, Pfam:PF00069 Length = 725 Score = 28.3 bits (60), Expect = 6.4 Identities = 14/51 (27%), Positives = 24/51 (47%) Frame = +3 Query: 252 SAHHGADLLQHDEETDPGGSGRVNPVLSHGGLLLDRYGEPPRLREAILRCC 404 S+H ++ + ++ G + P S G+L D +PP L +I CC Sbjct: 103 SSHFSKPSMKRNAQSPGAGLADIAPAQSSNGVLPDALTQPP-LSPSISNCC 152 >At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protein similar to Nit protein 2 [Homo sapiens] GI:9367116; contains Pfam profile PF00795: hydrolase, carbon-nitrogen family Length = 294 Score = 27.9 bits (59), Expect = 8.5 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +3 Query: 522 SGASALEHALKLESDVTNSIREVIKTCESSFN 617 S S H LKL S T+++R + + SSFN Sbjct: 37 SPRSITSHTLKLPSSSTSALRSISSSMASSFN 68 >At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protein similar to Nit protein 2 [Homo sapiens] GI:9367116; contains Pfam profile PF00795: hydrolase, carbon-nitrogen family Length = 369 Score = 27.9 bits (59), Expect = 8.5 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +3 Query: 522 SGASALEHALKLESDVTNSIREVIKTCESSFN 617 S S H LKL S T+++R + + SSFN Sbjct: 37 SPRSITSHTLKLPSSSTSALRSISSSMASSFN 68 >At2g19410.1 68415.m02264 protein kinase family protein contains Pfam profile: PF00069 Eukaryotic protein kinase domain Length = 801 Score = 27.9 bits (59), Expect = 8.5 Identities = 15/57 (26%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Frame = +3 Query: 495 QGPRHTSWESGASALEHAL-KLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDE 662 + P TS +S +E + +L++++ +++ + + CE F+ + V LS E+L+E Sbjct: 297 RSPPETSRKSKKVEIEEEVERLKNELQSTVFKYKQACEELFSTQNKVKMLSTEYLNE 353 >At1g16610.2 68414.m01990 arginine/serine-rich protein, putative (SR45) similar to arginine/serine-rich protein GI:6601502 from [Arabidopsis thaliana] Length = 407 Score = 27.9 bits (59), Expect = 8.5 Identities = 15/50 (30%), Positives = 23/50 (46%) Frame = +2 Query: 617 RLPPGRLLVRGIPRRTVQGPARPRRQGLDPQEDDGQARRPRRFHLSTRNP 766 R PP R +R R ++ P R R + P++ G A R R + +P Sbjct: 315 RSPPRRSPIRRRSRSPIRRPGRSRSSSISPRKGRGPAGRRGRSSSYSSSP 364 >At1g16610.1 68414.m01989 arginine/serine-rich protein, putative (SR45) similar to arginine/serine-rich protein GI:6601502 from [Arabidopsis thaliana] Length = 414 Score = 27.9 bits (59), Expect = 8.5 Identities = 15/50 (30%), Positives = 23/50 (46%) Frame = +2 Query: 617 RLPPGRLLVRGIPRRTVQGPARPRRQGLDPQEDDGQARRPRRFHLSTRNP 766 R PP R +R R ++ P R R + P++ G A R R + +P Sbjct: 322 RSPPRRSPIRRRSRSPIRRPGRSRSSSISPRKGRGPAGRRGRSSSYSSSP 371 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,487,977 Number of Sequences: 28952 Number of extensions: 303903 Number of successful extensions: 832 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 809 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 832 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1863090400 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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