Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0223.Seq
         (782 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    26   0.39 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.6  
Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      22   4.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.4  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   6.4  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   8.4  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 579 IFFRSNSIANSPLINCIRYR*LDEIPSTLLSS 484
           IF    SIAN   I+C RYR + +I    L S
Sbjct: 194 IFCPGGSIANGYAISCARYRFMPDIKKKGLHS 225


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 39  FM*VYFAILRKLFYLLMTILLVVFSLLMNFVVIKS 143
           F+   FAI+  L  LL++  ++   LL  F+V+KS
Sbjct: 138 FLRSLFAIMLPLGILLISQDVIANVLLFIFIVVKS 172


>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 368 TYVRNKVEAAKFVGIDALTINRDSD 442
           T+VR +++     G+D  T+N  +D
Sbjct: 47  TFVREQIDFVGSSGVDVSTVNSITD 71


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +3

Query: 48  VYFAILRKLFYLLMTILLVVFSLLMNFVVIKSCLL 152
           V+F +    FY    ILL V+     F++    LL
Sbjct: 94  VHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLL 128


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 51  YFAILRKLFYLLMTILLVVFSLLMNF 128
           +FA+   L  L  +ILL V SLL+ F
Sbjct: 57  FFALSELLTDLATSILLKVSSLLIGF 82


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +2

Query: 146 FAT*KAIKN*ISKLNNLHYSLCKHSKHHGA 235
           F T     N I  L NLH +L K +K H +
Sbjct: 220 FPTELTFCNKIKHLVNLHKNLVKVAKDHNS 249


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,304
Number of Sequences: 336
Number of extensions: 3993
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)