Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0223.Seq
         (782 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    25   1.1  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   5.6  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           22   5.6  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   5.6  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   5.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   5.6  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   5.6  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    22   7.4  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   9.8  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +2

Query: 440 DITEEQLLSEIQNLNEDNNVDGIS 511
           D+T + LL  I+NL + + +DG++
Sbjct: 137 DMTRQYLLQLIRNLRQSSALDGVT 160


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 543 LINCIRYR*LDEIPSTLLSSFKFW 472
           +I C+RYR    I  TL +  +F+
Sbjct: 269 MIRCLRYRPARAIVETLANFMRFY 292


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 543 LINCIRYR*LDEIPSTLLSSFKFW 472
           +I C+RYR    I  TL +  +F+
Sbjct: 140 MIRCLRYRPARAIVETLANFMRFY 163


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 347 QQLYSEWWELGFQDSPTV 294
           QQ  S W  LGF  +PT+
Sbjct: 334 QQWNSYWGILGFPSAPTI 351


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 347 QQLYSEWWELGFQDSPTV 294
           QQ  S W  LGF  +PT+
Sbjct: 334 QQWNSYWGILGFPSAPTI 351


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 543 LINCIRYR*LDEIPSTLLSSFKFW 472
           +I C+RYR    I  TL +  +F+
Sbjct: 269 MIRCLRYRPARAIVETLANFMRFY 292


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +2

Query: 194 LHYSLCKHSKHHGAYPRW 247
           LH+ +  H  H   Y RW
Sbjct: 155 LHHGMAYHRGHRKDYERW 172


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 562 IAPEKDIDGFHIINIGRLCVDLPTIVPA 645
           +A EKDIDGF ++    L  D   IV A
Sbjct: 219 LAKEKDIDGF-LVGGASLKPDFVQIVNA 245


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = -1

Query: 518 NWTKFHQHYYLHLNFGSQREVVLQLYH 438
           NW   H  Y   LN   +++  +  YH
Sbjct: 437 NWLPVHTSYKSGLNLEQEKKDSISHYH 463


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,974
Number of Sequences: 438
Number of extensions: 4734
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)