Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0220.Seq
         (736 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    44   0.005
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    41   0.036
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    38   0.26 
UniRef50_A1VP16 Cluster: Peptidase C14, caspase catalytic subuni...    34   3.1  
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu...    33   5.5  
UniRef50_Q13U64 Cluster: Putative uncharacterized protein; n=1; ...    33   7.3  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 43.6 bits (98), Expect = 0.005
 Identities = 27/72 (37%), Positives = 31/72 (43%)
 Frame = +1

Query: 418 PTARRTNATTSFLTATILVYXXXXXXXXXXXPDLPSNCSSLKYLKCTHSDYEAS*EFPYR 597
           P AR  + TTSFLTA  L+Y             L      +K  K      +      Y 
Sbjct: 32  PPARSQDPTTSFLTAATLIYAIGAGITAAAGTRLALQWILVKGFKVDSFQLQGLERVLYC 91

Query: 598 YFSSLPPRAGSG 633
           YFSSLPPR GSG
Sbjct: 92  YFSSLPPRVGSG 103



 Score = 35.9 bits (79), Expect = 1.0
 Identities = 19/26 (73%), Positives = 21/26 (80%)
 Frame = +3

Query: 510 TRLALQLFLVKIFKVYSFRLRGLVRV 587
           TRLALQ  LVK FKV SF+L+GL RV
Sbjct: 63  TRLALQWILVKGFKVDSFQLQGLERV 88


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 40.7 bits (91), Expect = 0.036
 Identities = 17/26 (65%), Positives = 21/26 (80%)
 Frame = +3

Query: 72  GKCFR*CSSCDDPRISPLTSQYECSQ 149
           GKCFR C S ++ RISPLTS+Y+C Q
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCPQ 284


>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
          Predicted protein - Nematostella vectensis
          Length = 79

 Score = 37.9 bits (84), Expect = 0.26
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = -2

Query: 63 FHQSRTKVRGSKAIRYRPSSN 1
          F   RTKVRGSK IRYRPSSN
Sbjct: 6  FRCQRTKVRGSKTIRYRPSSN 26


>UniRef50_A1VP16 Cluster: Peptidase C14, caspase catalytic subunit
           p20; n=1; Polaromonas naphthalenivorans CJ2|Rep:
           Peptidase C14, caspase catalytic subunit p20 -
           Polaromonas naphthalenivorans (strain CJ2)
          Length = 562

 Score = 34.3 bits (75), Expect = 3.1
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +3

Query: 390 VSVSPRMRATDSAAHKCNYELFNRNNFSIRYWS 488
           V+  PR+RA D AA + NY L NR+N+ +  W+
Sbjct: 163 VNAPPRVRAADPAAVQANY-LANRSNYEVSQWT 194


>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
          lucimarinus CCE9901|Rep: Predicted protein -
          Ostreococcus lucimarinus CCE9901
          Length = 72

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 15/21 (71%), Positives = 15/21 (71%)
 Frame = -2

Query: 63 FHQSRTKVRGSKAIRYRPSSN 1
          FH  RTKV GSK IRY PS N
Sbjct: 6  FHCQRTKVGGSKMIRYHPSLN 26


>UniRef50_Q13U64 Cluster: Putative uncharacterized protein; n=1;
           Burkholderia xenovorans LB400|Rep: Putative
           uncharacterized protein - Burkholderia xenovorans
           (strain LB400)
          Length = 114

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = -3

Query: 692 GKPE-ENGLPHPKERQQARKYPLPAR 618
           G P+ E G+PHPK+RQ  +K P P R
Sbjct: 17  GTPQGEQGIPHPKKRQVRQKIPSPKR 42


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 731,351,834
Number of Sequences: 1657284
Number of extensions: 15180737
Number of successful extensions: 42055
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 39621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42011
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)