Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0216.Seq
(443 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB6C86 Cluster: PREDICTED: similar to proteasome... 86 3e-16
UniRef50_UPI0000E465E2 Cluster: PREDICTED: similar to MGC83233 p... 84 1e-15
UniRef50_Q13041 Cluster: P67; n=14; Coelomata|Rep: P67 - Homo sa... 81 1e-14
UniRef50_Q13200 Cluster: 26S proteasome non-ATPase regulatory su... 81 1e-14
UniRef50_Q9GZH5 Cluster: Proteasome regulatory particle, non-atp... 79 4e-14
UniRef50_UPI00015B44CD Cluster: PREDICTED: similar to proteasome... 77 2e-13
UniRef50_UPI0000D56C55 Cluster: PREDICTED: similar to proteasome... 77 2e-13
UniRef50_Q5KAX5 Cluster: Endopeptidase, putative; n=1; Filobasid... 75 9e-13
UniRef50_Q4PAF8 Cluster: Putative uncharacterized protein; n=1; ... 74 2e-12
UniRef50_P87048 Cluster: 26S proteasome regulatory subunit rpn1;... 74 2e-12
UniRef50_Q6BP56 Cluster: Similar to CA1252|CaRPN1 Candida albica... 71 1e-11
UniRef50_Q6CFX0 Cluster: Similar to sp|P38764 Saccharomyces cere... 69 6e-11
UniRef50_Q54BC6 Cluster: 26S proteasome regulatory subunit S2; n... 66 2e-10
UniRef50_Q5CPW2 Cluster: Proteasome regulatory subunit S2; n=2; ... 64 1e-09
UniRef50_P38764 Cluster: 26S proteasome regulatory subunit RPN1;... 62 4e-09
UniRef50_Q6FPV6 Cluster: 26S proteasome regulatory subunit RPN1;... 62 7e-09
UniRef50_A2WYR0 Cluster: Putative uncharacterized protein; n=1; ... 61 9e-09
UniRef50_A7AS27 Cluster: Proteasome 26S regulatory subunit, puta... 58 9e-08
UniRef50_A0EBG0 Cluster: Chromosome undetermined scaffold_88, wh... 58 9e-08
UniRef50_A5KBK8 Cluster: 26S proteasome regulatory subunit, puta... 56 3e-07
UniRef50_A2EPF2 Cluster: Proteasome/cyclosome repeat family prot... 55 8e-07
UniRef50_O61123 Cluster: 19S cap proteasome S2 subunit; n=2; Ent... 54 1e-06
UniRef50_Q8WRU8 Cluster: Proteasome regulatory non-ATP-ase subun... 53 2e-06
UniRef50_O49456 Cluster: Putative uncharacterized protein F20O9.... 53 3e-06
UniRef50_Q4N7W1 Cluster: 26S proteasome regulatory subunit 2, pu... 51 1e-05
UniRef50_Q7QSS0 Cluster: GLP_714_8871_5173; n=1; Giardia lamblia... 36 0.52
UniRef50_Q8SS65 Cluster: 26S PROTEASOME REGULATORY SUBUNIT 4; n=... 35 0.91
UniRef50_Q8IVW6 Cluster: AT-rich interactive domain-containing p... 34 1.6
UniRef50_Q8ZZL3 Cluster: Putative uncharacterized protein PAE020... 32 6.4
UniRef50_UPI0000DC08DD Cluster: zinc finger protein 296; n=1; Ra... 31 8.5
UniRef50_A0YLC8 Cluster: Predicted signal transduction protein c... 31 8.5
>UniRef50_UPI0000DB6C86 Cluster: PREDICTED: similar to proteasome
(prosome, macropain) 26S subunit, non-ATPase, 2; n=1;
Apis mellifera|Rep: PREDICTED: similar to proteasome
(prosome, macropain) 26S subunit, non-ATPase, 2 - Apis
mellifera
Length = 871
Score = 86.2 bits (204), Expect = 3e-16
Identities = 38/65 (58%), Positives = 50/65 (76%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P L+V+DVLNKYSHD+D++VA +AIFA+GLVGAGTNN YH K+P+HLF+
Sbjct: 666 PDLAVLDVLNKYSHDNDSEVANSAIFALGLVGAGTNNARLATMLRQLACYHAKNPLHLFL 725
Query: 429 VRLAQ 443
VR++Q
Sbjct: 726 VRISQ 730
Score = 62.5 bits (145), Expect = 4e-09
Identities = 33/57 (57%), Positives = 41/57 (71%)
Frame = +1
Query: 82 LSSVQAVATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
+ S QA+ATLGVA + L E G E +RIFGQ+GRYG RRA+PLA+ L S+SNP
Sbjct: 613 IGSSQAIATLGVAAVGLGE--GKEN-SRIFGQIGRYGSIYARRAMPLALGLSSLSNP 666
>UniRef50_UPI0000E465E2 Cluster: PREDICTED: similar to MGC83233
protein, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to MGC83233 protein,
partial - Strongylocentrotus purpuratus
Length = 418
Score = 84.2 bits (199), Expect = 1e-15
Identities = 37/65 (56%), Positives = 46/65 (70%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P L ++D L+K+SHD DN+VA+NAI+AMG+VGAGTNN YH K P +LFM
Sbjct: 272 PQLQILDTLSKFSHDPDNEVAHNAIYAMGIVGAGTNNARLAAMLRQLAQYHAKDPANLFM 331
Query: 429 VRLAQ 443
VRLAQ
Sbjct: 332 VRLAQ 336
Score = 43.2 bits (97), Expect = 0.003
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 184 RYGEPVVRRAVPLAIALCSVSNP 252
RYGEPV+RR+VPL +AL SVSNP
Sbjct: 250 RYGEPVIRRSVPLGLALLSVSNP 272
>UniRef50_Q13041 Cluster: P67; n=14; Coelomata|Rep: P67 - Homo
sapiens (Human)
Length = 591
Score = 80.6 bits (190), Expect = 1e-14
Identities = 35/65 (53%), Positives = 47/65 (72%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P L+++D L+K+SHD+D +V+YN+IFAMG+VG+GTNN YH K P +LFM
Sbjct: 384 PRLNILDTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFM 443
Query: 429 VRLAQ 443
VRLAQ
Sbjct: 444 VRLAQ 448
Score = 43.6 bits (98), Expect = 0.002
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +1
Query: 184 RYGEPVVRRAVPLAIALCSVSNP 252
RYGEP +RRAVPLA+AL SVSNP
Sbjct: 362 RYGEPTLRRAVPLALALISVSNP 384
>UniRef50_Q13200 Cluster: 26S proteasome non-ATPase regulatory
subunit 2; n=48; Euteleostomi|Rep: 26S proteasome
non-ATPase regulatory subunit 2 - Homo sapiens (Human)
Length = 908
Score = 80.6 bits (190), Expect = 1e-14
Identities = 35/65 (53%), Positives = 47/65 (72%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P L+++D L+K+SHD+D +V+YN+IFAMG+VG+GTNN YH K P +LFM
Sbjct: 702 PRLNILDTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFM 761
Query: 429 VRLAQ 443
VRLAQ
Sbjct: 762 VRLAQ 766
Score = 77.8 bits (183), Expect = 1e-13
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = +1
Query: 94 QAVATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
Q VA LG+A+IA+ EE GAEM R FG L RYGEP +RRAVPLA+AL SVSNP
Sbjct: 650 QGVAVLGIALIAMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNP 702
>UniRef50_Q9GZH5 Cluster: Proteasome regulatory particle,
non-atpase-like protein 1; n=2; Caenorhabditis|Rep:
Proteasome regulatory particle, non-atpase-like protein
1 - Caenorhabditis elegans
Length = 981
Score = 79.0 bits (186), Expect = 4e-14
Identities = 36/57 (63%), Positives = 47/57 (82%)
Frame = +1
Query: 82 LSSVQAVATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
LSS QAVA LG+ +IA+ ++ G++M R+FG L RYGEPV+RRAVPLA++L SVSNP
Sbjct: 705 LSSQQAVAVLGIGLIAMGDDIGSQMALRMFGHLIRYGEPVIRRAVPLALSLLSVSNP 761
Score = 75.8 bits (178), Expect = 4e-13
Identities = 35/65 (53%), Positives = 44/65 (67%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P L++++ L+K+SHDSD D A+NAIFAMGLVGAGTNN YH K V L +
Sbjct: 761 PQLNILETLSKFSHDSDADTAHNAIFAMGLVGAGTNNARLVAMLRNLASYHYKDQVSLML 820
Query: 429 VRLAQ 443
VR+AQ
Sbjct: 821 VRIAQ 825
>UniRef50_UPI00015B44CD Cluster: PREDICTED: similar to proteasome
26S non-ATPase subunit 2; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to proteasome 26S non-ATPase subunit
2 - Nasonia vitripennis
Length = 897
Score = 77.0 bits (181), Expect = 2e-13
Identities = 33/65 (50%), Positives = 45/65 (69%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P ++DVLNKYSHD+D +VA NAIFA+GL+GAGTNN +H + P +LF+
Sbjct: 693 PDPGLLDVLNKYSHDNDPNVALNAIFALGLIGAGTNNARLATILRQLAAFHSRDPAYLFL 752
Query: 429 VRLAQ 443
+R+AQ
Sbjct: 753 IRIAQ 757
Score = 58.0 bits (134), Expect = 9e-08
Identities = 30/57 (52%), Positives = 40/57 (70%)
Frame = +1
Query: 82 LSSVQAVATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
+S Q +A+LGVA++ L++ G E +RIFGQ+GRYG P R AVPL AL +SNP
Sbjct: 640 ISLTQPIASLGVAIVGLSD--GKEN-SRIFGQIGRYGAPPARTAVPLCFALSYLSNP 693
>UniRef50_UPI0000D56C55 Cluster: PREDICTED: similar to proteasome
(prosome, macropain) 26S subunit, non-ATPase, 2; n=1;
Tribolium castaneum|Rep: PREDICTED: similar to
proteasome (prosome, macropain) 26S subunit, non-ATPase,
2 - Tribolium castaneum
Length = 870
Score = 77.0 bits (181), Expect = 2e-13
Identities = 36/65 (55%), Positives = 43/65 (66%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P ++I+VL KYSHD D+DVA NAIF +G VGAGTNN YH K+P LFM
Sbjct: 668 PQPTIINVLTKYSHDIDDDVACNAIFGLGYVGAGTNNARLAVTLRQLALYHAKNPFQLFM 727
Query: 429 VRLAQ 443
VR+AQ
Sbjct: 728 VRIAQ 732
Score = 72.9 bits (171), Expect = 3e-12
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +1
Query: 94 QAVATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
+A+A L VA I+ EE G EM RIFGQ+ RYGEP VR+AVPLAIAL SVS+P
Sbjct: 616 KAIAVLAVAAISKGEELGTEMIQRIFGQISRYGEPSVRKAVPLAIALTSVSDP 668
>UniRef50_Q5KAX5 Cluster: Endopeptidase, putative; n=1;
Filobasidiella neoformans|Rep: Endopeptidase, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1003
Score = 74.5 bits (175), Expect = 9e-13
Identities = 37/65 (56%), Positives = 42/65 (64%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P LS++D L+KYSHDSD DVA NAI AMG VGAGTNN Y+ K LFM
Sbjct: 793 PQLSILDTLSKYSHDSDLDVAINAILAMGFVGAGTNNARLAQMLRGLAVYYAKEVDCLFM 852
Query: 429 VRLAQ 443
VR+AQ
Sbjct: 853 VRIAQ 857
Score = 68.1 bits (159), Expect = 8e-11
Identities = 31/53 (58%), Positives = 40/53 (75%)
Frame = +1
Query: 94 QAVATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
QA ATLG+A+IA+ E+ GAEM R F L YG+PV+R++VPLA+ L S SNP
Sbjct: 741 QAFATLGIALIAMGEDVGAEMALRQFQHLMTYGDPVIRKSVPLALGLISASNP 793
>UniRef50_Q4PAF8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 946
Score = 73.7 bits (173), Expect = 2e-12
Identities = 36/65 (55%), Positives = 44/65 (67%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P++ V+D L+KYSHDSD DVA NAI AMGLVGAG+NN Y+ K P LFM
Sbjct: 736 PSMPVLDTLSKYSHDSDLDVAINAILAMGLVGAGSNNARLAQMLRQLAGYYYKEPDCLFM 795
Query: 429 VRLAQ 443
VR++Q
Sbjct: 796 VRVSQ 800
Score = 64.1 bits (149), Expect = 1e-09
Identities = 30/56 (53%), Positives = 36/56 (64%)
Frame = +1
Query: 94 QAVATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNPHSP 261
QA A +G+A++ + EE GAEM TR L YGE RRAVPLA+AL SNP P
Sbjct: 684 QAFAVIGIALVTMGEEVGAEMATRHLSHLMHYGEATTRRAVPLALALLHPSNPSMP 739
>UniRef50_P87048 Cluster: 26S proteasome regulatory subunit rpn1;
n=23; cellular organisms|Rep: 26S proteasome regulatory
subunit rpn1 - Schizosaccharomyces pombe (Fission yeast)
Length = 891
Score = 73.7 bits (173), Expect = 2e-12
Identities = 35/65 (53%), Positives = 43/65 (66%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P + + D L++YSHD+D DVAYNAIFAMGLVGAGT+N Y+ K LFM
Sbjct: 683 PQMRIFDTLSRYSHDNDLDVAYNAIFAMGLVGAGTSNARLAQLLRQLASYYHKESNALFM 742
Query: 429 VRLAQ 443
VR+AQ
Sbjct: 743 VRIAQ 747
Score = 65.3 bits (152), Expect = 6e-10
Identities = 29/56 (51%), Positives = 39/56 (69%)
Frame = +1
Query: 85 SSVQAVATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
+++Q A LGVA IA+ E+ GAEM R F + YGEP +R+A+PLA+ L S SNP
Sbjct: 628 TTIQTFAALGVATIAMGEDIGAEMVLRHFDHMMHYGEPSIRKAIPLALGLLSASNP 683
>UniRef50_Q6BP56 Cluster: Similar to CA1252|CaRPN1 Candida albicans
CaRPN1 26S proteasome regulatory subunit; n=2;
Saccharomycetaceae|Rep: Similar to CA1252|CaRPN1 Candida
albicans CaRPN1 26S proteasome regulatory subunit -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 967
Score = 70.9 bits (166), Expect = 1e-11
Identities = 35/65 (53%), Positives = 42/65 (64%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P + V D L++YSHD D +VA NAI+AMGLVGAGTNN Y+ KS LFM
Sbjct: 752 PQMKVFDTLSRYSHDPDLEVAQNAIYAMGLVGAGTNNARLAQLLRQLASYYIKSADSLFM 811
Query: 429 VRLAQ 443
VR+AQ
Sbjct: 812 VRIAQ 816
Score = 56.8 bits (131), Expect = 2e-07
Identities = 27/53 (50%), Positives = 34/53 (64%)
Frame = +1
Query: 94 QAVATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
Q A LG+A IA+ E+ G +M R F L YG P++RRAVPLA+ L S S P
Sbjct: 700 QGFAVLGLACIAMGEDIGQDMAFRHFSHLMHYGNPLIRRAVPLAMGLVSTSYP 752
>UniRef50_Q6CFX0 Cluster: Similar to sp|P38764 Saccharomyces
cerevisiae 26S proteasome regulatory subunit RPN1; n=1;
Yarrowia lipolytica|Rep: Similar to sp|P38764
Saccharomyces cerevisiae 26S proteasome regulatory
subunit RPN1 - Yarrowia lipolytica (Candida lipolytica)
Length = 979
Score = 68.5 bits (160), Expect = 6e-11
Identities = 32/63 (50%), Positives = 41/63 (65%)
Frame = +3
Query: 255 LSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFMVR 434
+ V D L++YSHD+D +VA N+IF+MGLVGAGTNN Y+ K P LF VR
Sbjct: 772 MRVFDTLSRYSHDADMEVALNSIFSMGLVGAGTNNARLAQLLRQLASYYSKDPDGLFTVR 831
Query: 435 LAQ 443
+AQ
Sbjct: 832 IAQ 834
Score = 61.3 bits (142), Expect = 9e-09
Identities = 30/55 (54%), Positives = 38/55 (69%)
Frame = +1
Query: 85 SSVQAVATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSN 249
SS QA + LG+A++A+ EE G EM R FG L YG+ V+RAVPLA+ L S SN
Sbjct: 715 SSHQAYSVLGLAIVAMGEEIGQEMVLRHFGHLMHYGDAQVKRAVPLAMGLVSASN 769
>UniRef50_Q54BC6 Cluster: 26S proteasome regulatory subunit S2; n=1;
Dictyostelium discoideum AX4|Rep: 26S proteasome
regulatory subunit S2 - Dictyostelium discoideum AX4
Length = 893
Score = 66.5 bits (155), Expect = 2e-10
Identities = 30/65 (46%), Positives = 44/65 (67%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P ++++D+L+K SHD+D +VA AI ++GL+GAGTNN ++GK VHLF
Sbjct: 679 PRIAIMDILSKLSHDNDPEVAQGAILSLGLIGAGTNNARIGGMLRALAVFYGKD-VHLFF 737
Query: 429 VRLAQ 443
VR+AQ
Sbjct: 738 VRIAQ 742
Score = 54.4 bits (125), Expect = 1e-06
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = +1
Query: 100 VATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
+A L +A+IA+ EE G++MC R+F L + G ++RA+PLA+ L S SNP
Sbjct: 629 LAVLSIALIAMGEELGSDMCLRMFDHLLQKGNVHIKRAIPLALGLLSPSNP 679
>UniRef50_Q5CPW2 Cluster: Proteasome regulatory subunit S2; n=2;
Cryptosporidium|Rep: Proteasome regulatory subunit S2 -
Cryptosporidium parvum Iowa II
Length = 1045
Score = 64.1 bits (149), Expect = 1e-09
Identities = 31/65 (47%), Positives = 40/65 (61%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P +ID ++K +HDSD DVA NAIFA+GL+ AGTNN Y+GK L+
Sbjct: 831 PKPVLIDTISKLTHDSDPDVALNAIFALGLISAGTNNSRTANLLRQLASYYGKDKHALYA 890
Query: 429 VRLAQ 443
VR+AQ
Sbjct: 891 VRIAQ 895
Score = 47.2 bits (107), Expect = 2e-04
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +1
Query: 100 VATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
V L +A+I+L EE G EM R + +Y +RRAVP+++A S+ NP
Sbjct: 781 VCVLNMALISLGEEIGTEMALRALDNVLQYSSVFIRRAVPISLAALSIGNP 831
>UniRef50_P38764 Cluster: 26S proteasome regulatory subunit RPN1;
n=8; Saccharomycetales|Rep: 26S proteasome regulatory
subunit RPN1 - Saccharomyces cerevisiae (Baker's yeast)
Length = 993
Score = 62.5 bits (145), Expect = 4e-09
Identities = 29/65 (44%), Positives = 39/65 (60%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P + V D L ++SHD+D +V+ N+IFAMGL GAGTNN Y+ + LF+
Sbjct: 788 PQMKVFDTLTRFSHDADLEVSMNSIFAMGLCGAGTNNARLAQLLRQLASYYSREQDALFI 847
Query: 429 VRLAQ 443
RLAQ
Sbjct: 848 TRLAQ 852
Score = 57.6 bits (133), Expect = 1e-07
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +1
Query: 97 AVATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
A A LG+A+IAL E+ G EM R FG L YG +RR VPLA+ + SVS+P
Sbjct: 737 AYAVLGIALIALGEDIGKEMSLRHFGHLMHYGNEHIRRMVPLAMGIVSVSDP 788
>UniRef50_Q6FPV6 Cluster: 26S proteasome regulatory subunit RPN1;
n=2; Saccharomycetales|Rep: 26S proteasome regulatory
subunit RPN1 - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 983
Score = 61.7 bits (143), Expect = 7e-09
Identities = 29/65 (44%), Positives = 37/65 (56%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P + V D L ++SHD D DV+ N+IFAMGL G GTNN Y+ + LF+
Sbjct: 778 PQMKVFDTLTRFSHDPDLDVSMNSIFAMGLCGVGTNNARLAQLLRQLASYYSREQDALFI 837
Query: 429 VRLAQ 443
RLAQ
Sbjct: 838 TRLAQ 842
Score = 55.2 bits (127), Expect = 6e-07
Identities = 26/52 (50%), Positives = 34/52 (65%)
Frame = +1
Query: 97 AVATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
A A +G+A+I + EE G EM R FG L YG +RR VPLA+ L SV++P
Sbjct: 727 AYAVIGIALITMGEEIGKEMSLRHFGHLMHYGNEHIRRMVPLAMGLVSVADP 778
>UniRef50_A2WYR0 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 1103
Score = 61.3 bits (142), Expect = 9e-09
Identities = 29/53 (54%), Positives = 38/53 (71%)
Frame = +1
Query: 94 QAVATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
Q A LG+A+IA+AEE GAEM R +L +YGE +RRAVPLA+ + +SNP
Sbjct: 807 QGPAVLGIALIAMAEELGAEMAVRPLERLLQYGEQNIRRAVPLALGILCISNP 859
Score = 47.6 bits (108), Expect = 1e-04
Identities = 19/37 (51%), Positives = 29/37 (78%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNN 359
P ++V+D L++ HD+D DV+ AI ++GL+GAGTNN
Sbjct: 859 PKVNVMDTLSRLCHDADADVSMAAIISLGLIGAGTNN 895
>UniRef50_A7AS27 Cluster: Proteasome 26S regulatory subunit,
putative; n=1; Babesia bovis|Rep: Proteasome 26S
regulatory subunit, putative - Babesia bovis
Length = 1008
Score = 58.0 bits (134), Expect = 9e-08
Identities = 27/64 (42%), Positives = 36/64 (56%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P VID+L+K +HD+D V NAIF MG+VGAGTNN H + F+
Sbjct: 800 PCPQVIDILSKLTHDADYQVTINAIFGMGIVGAGTNNSRIAVLLLNLAKTHARDSKGTFI 859
Query: 429 VRLA 440
+R+A
Sbjct: 860 IRIA 863
Score = 39.5 bits (88), Expect = 0.032
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +1
Query: 97 AVATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
+++ +G+A+ A+ + G M R+ ++G RRA PLA+A+ SNP
Sbjct: 749 SISIIGIAMTAIGDPVGTAMLLRMIDHPLQFGSLCERRAAPLALAIAYASNP 800
>UniRef50_A0EBG0 Cluster: Chromosome undetermined scaffold_88, whole
genome shotgun sequence; n=3; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_88, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 887
Score = 58.0 bits (134), Expect = 9e-08
Identities = 26/54 (48%), Positives = 41/54 (75%)
Frame = +1
Query: 91 VQAVATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
+Q VA LG+A+IA +E+ G+EM RIF + ++ + V+RA+PLA+AL ++SNP
Sbjct: 613 LQQVAILGIALIASSEDIGSEMVYRIFQHILQFSDVEVKRAIPLAVALINISNP 666
Score = 52.4 bits (120), Expect = 4e-06
Identities = 25/65 (38%), Positives = 36/65 (55%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P + +D+L K +HD D +++Y A +MGL+GAGTNN Y LF+
Sbjct: 666 PKIQPMDLLLKLAHDRDQELSYRATLSMGLLGAGTNNSRIADKLRGLAVYFMNDSNGLFL 725
Query: 429 VRLAQ 443
VR+AQ
Sbjct: 726 VRIAQ 730
>UniRef50_A5KBK8 Cluster: 26S proteasome regulatory subunit, putative;
n=5; Plasmodium|Rep: 26S proteasome regulatory subunit,
putative - Plasmodium vivax
Length = 1039
Score = 56.0 bits (129), Expect = 3e-07
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P +++D+L+K +HD D DVA +AI ++G VGAGTNN ++ K F+
Sbjct: 829 PKPNIVDILSKLTHDQDADVALHAIMSLGFVGAGTNNSRIAILLRQLSTFYCKDTNATFV 888
Query: 429 VRLAQ 443
VRL+Q
Sbjct: 889 VRLSQ 893
Score = 44.4 bits (100), Expect = 0.001
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = +1
Query: 94 QAVATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
Q VA L +A+IAL ++ +EM TRI +Y ++AVPLA+AL S P
Sbjct: 777 QCVAILNIALIALTDDISSEMTTRIIDHFLQYSNLNQKKAVPLALALLFTSFP 829
>UniRef50_A2EPF2 Cluster: Proteasome/cyclosome repeat family
protein; n=2; Trichomonas vaginalis G3|Rep:
Proteasome/cyclosome repeat family protein - Trichomonas
vaginalis G3
Length = 850
Score = 54.8 bits (126), Expect = 8e-07
Identities = 24/52 (46%), Positives = 36/52 (69%)
Frame = +1
Query: 97 AVATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
A A +G+A+IAL + G +M R+F + +YG+P R+ VP+AIAL S+S P
Sbjct: 589 AAAVIGIAIIALGDPIGTQMSKRMFELILQYGKPNARKMVPIAIALTSISQP 640
Score = 45.2 bits (102), Expect = 6e-04
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = +3
Query: 246 QPALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLF 425
QP ++D L++ HD D +VA A A+GL+GAGTNN YH L
Sbjct: 639 QPLPELVDQLHRIGHDPDVNVARAACVALGLIGAGTNNTRVINTLFALELYHKNDTSVLT 698
Query: 426 MVR 434
++R
Sbjct: 699 LLR 701
>UniRef50_O61123 Cluster: 19S cap proteasome S2 subunit; n=2;
Entamoeba histolytica|Rep: 19S cap proteasome S2 subunit
- Entamoeba histolytica
Length = 843
Score = 54.4 bits (125), Expect = 1e-06
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = +1
Query: 100 VATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
VA +GVA+ +++E E+ TR+ ++ RYGEP V+R VP A+AL S+ P
Sbjct: 592 VAVIGVALALMSDEFSTELSTRLINEVQRYGEPSVKRYVPFALALTSIGKP 642
Score = 32.7 bits (71), Expect = 3.7
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 246 QPALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGT 353
+P + +++ L + +H SD A NAI ++GL AGT
Sbjct: 641 KPKVGLLEQLTRLAHGSDLIAARNAILSIGLASAGT 676
>UniRef50_Q8WRU8 Cluster: Proteasome regulatory non-ATP-ase subunit
1; n=9; Trypanosomatidae|Rep: Proteasome regulatory
non-ATP-ase subunit 1 - Trypanosoma brucei
Length = 911
Score = 53.2 bits (122), Expect = 2e-06
Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKS--PVHL 422
P + V++ LN+ HDSD A NAI AMG+V AG+NN Y+ K +L
Sbjct: 702 PGMQVVETLNRLLHDSDMLTAINAIVAMGIVAAGSNNARVVSKLRNLALYYQKDRFASYL 761
Query: 423 FMVRLAQ 443
F VRLAQ
Sbjct: 762 FSVRLAQ 768
Score = 39.5 bits (88), Expect = 0.032
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Frame = +1
Query: 94 QAVATLGVAVIALAEETGAEMCTR-----IFGQLGRYGEPVV--RRAVPLAIALCSVSNP 252
+A A LG+A++AL E+ G EM R + GE + R A+PLA AL S SNP
Sbjct: 643 KAAAVLGIALVALGEDIGTEMAKRSIIHTLLVDTVSKGEANISGRHAIPLAYALLSASNP 702
>UniRef50_O49456 Cluster: Putative uncharacterized protein
F20O9.150; n=1; Arabidopsis thaliana|Rep: Putative
uncharacterized protein F20O9.150 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1103
Score = 52.8 bits (121), Expect = 3e-06
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +1
Query: 94 QAVATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
Q A +G+A++A++EE G +M R ++ +YGE +RRAVPLA+ L +SNP
Sbjct: 704 QGPAVIGLAMVAMSEELGLDMEIRSLERVLQYGEQNIRRAVPLALGLLCISNP 756
Score = 52.8 bits (121), Expect = 3e-06
Identities = 25/61 (40%), Positives = 37/61 (60%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P ++V+D L++ SHD+D++VA AI ++GL+GAGTNN Y+ K LF
Sbjct: 756 PKVTVMDTLSRLSHDTDSEVAMAAIISLGLIGAGTNNARIAGMLRNLSSYYYKDASLLFC 815
Query: 429 V 431
V
Sbjct: 816 V 816
>UniRef50_Q4N7W1 Cluster: 26S proteasome regulatory subunit 2,
putative; n=2; Theileria|Rep: 26S proteasome regulatory
subunit 2, putative - Theileria parva
Length = 1123
Score = 51.2 bits (117), Expect = 1e-05
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
PA +++ L+K SHDSD DV+ AI +GLVGAGTNN + + +++
Sbjct: 918 PAPAIVSALSKLSHDSDKDVSLCAILGLGLVGAGTNNSRISQLLQNIAKHSYRDSTLMYV 977
Query: 429 VRLA 440
+RL+
Sbjct: 978 LRLS 981
Score = 40.7 bits (91), Expect = 0.014
Identities = 21/56 (37%), Positives = 34/56 (60%)
Frame = +1
Query: 85 SSVQAVATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
+ + V+ L ++++++ E G+ M R+ + G RRAVPLAIAL +VSNP
Sbjct: 863 NELYGVSILCISLLSMGETIGSSMLVRLLEHPLQCGTVHERRAVPLAIALVNVSNP 918
>UniRef50_Q7QSS0 Cluster: GLP_714_8871_5173; n=1; Giardia lamblia ATCC
50803|Rep: GLP_714_8871_5173 - Giardia lamblia ATCC 50803
Length = 1232
Score = 35.5 bits (78), Expect = 0.52
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3
Query: 246 QPALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNN 359
+PA + D+L + + SD ++ NAI A+GL+G G+ N
Sbjct: 1011 RPAPELTDMLFRMASQSDESLSINAIIALGLIGCGSCN 1048
Score = 35.1 bits (77), Expect = 0.69
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +1
Query: 100 VATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
+ G+ ++A + + M TR ++ +YG +RA PLA+A+ ++S P
Sbjct: 962 ILVAGLGLVAGNDPVCSMMVTRFINRIMQYGSSYAKRACPLALAVMNLSRP 1012
>UniRef50_Q8SS65 Cluster: 26S PROTEASOME REGULATORY SUBUNIT 4; n=1;
Encephalitozoon cuniculi|Rep: 26S PROTEASOME REGULATORY
SUBUNIT 4 - Encephalitozoon cuniculi
Length = 795
Score = 34.7 bits (76), Expect = 0.91
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P ++V+D+L K + + + + I ++GL+GAGT N Y+ K L +
Sbjct: 602 PQVNVLDMLEKSLNIGETNCIISTIVSLGLIGAGTLNSRITKILDQQYSYYYKDSKVLPV 661
Query: 429 VRLAQ 443
+++AQ
Sbjct: 662 LKIAQ 666
>UniRef50_Q8IVW6 Cluster: AT-rich interactive domain-containing
protein 3B; n=27; Euteleostomi|Rep: AT-rich interactive
domain-containing protein 3B - Homo sapiens (Human)
Length = 561
Score = 33.9 bits (74), Expect = 1.6
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -1
Query: 224 ASGTARRTTGSPYLPSCPKMRVHISAPVSSANAMTATPRVATACT 90
A+ TA G+P L S PK+R I SS+ T++PR++ A T
Sbjct: 341 AAATAAAAAGAPALLSPPKIRFPILGLGSSSGTNTSSPRISPATT 385
>UniRef50_Q8ZZL3 Cluster: Putative uncharacterized protein PAE0207;
n=1; Pyrobaculum aerophilum|Rep: Putative
uncharacterized protein PAE0207 - Pyrobaculum aerophilum
Length = 255
Score = 31.9 bits (69), Expect = 6.4
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 186 PTQLSEDAGAHFGARFLCQCDDRDAKG 106
P +S+ AH G R LC CD+RD KG
Sbjct: 206 PLVVSDSVAAHVG-RSLCGCDERDKKG 231
>UniRef50_UPI0000DC08DD Cluster: zinc finger protein 296; n=1;
Rattus norvegicus|Rep: zinc finger protein 296 - Rattus
norvegicus
Length = 393
Score = 31.5 bits (68), Expect = 8.5
Identities = 13/20 (65%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +2
Query: 80 SCPR-CKPWRPLASRSSHWQ 136
S PR C PW PL S+SS WQ
Sbjct: 51 SAPRTCAPWMPLDSKSSDWQ 70
>UniRef50_A0YLC8 Cluster: Predicted signal transduction protein
containing Nacht domain; n=1; Lyngbya sp. PCC 8106|Rep:
Predicted signal transduction protein containing Nacht
domain - Lyngbya sp. PCC 8106
Length = 1044
Score = 31.5 bits (68), Expect = 8.5
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +3
Query: 258 SVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGT 353
+V+D L + D D+DV++ A FA+G +G G+
Sbjct: 778 TVVDALLQALTDEDSDVSWRAAFALGQLGKGS 809
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 331,019,262
Number of Sequences: 1657284
Number of extensions: 5323271
Number of successful extensions: 18839
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 18270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18830
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22761518346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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