Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0216.Seq
(443 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF145304-1|AAF08385.1| 919|Drosophila melanogaster 26S proteaso... 85 5e-17
AF132182-1|AAD34770.1| 919|Drosophila melanogaster unknown prot... 85 5e-17
AE014296-3245|AAF49095.2| 919|Drosophila melanogaster CG7762-PA... 85 5e-17
AY075312-1|AAL68179.1| 919|Drosophila melanogaster GH01967p pro... 29 3.8
AE013599-1036|AAF58836.2| 919|Drosophila melanogaster CG30011-P... 29 3.8
AE013599-1035|AAF58837.2| 932|Drosophila melanogaster CG30011-P... 29 3.8
AF051933-1|AAC73052.1| 1097|Drosophila melanogaster cyclin T pro... 27 8.7
>AF145304-1|AAF08385.1| 919|Drosophila melanogaster 26S proteasome
regulatory complexsubunit p97 protein.
Length = 919
Score = 84.6 bits (200), Expect = 5e-17
Identities = 39/65 (60%), Positives = 47/65 (72%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P L++ID L+K+SHDSD +VA+NAIFAMGLVGAGTNN YH K P +LFM
Sbjct: 713 PKLNIIDTLSKFSHDSDAEVAHNAIFAMGLVGAGTNNARLASMLRQLAQYHSKDPSNLFM 772
Query: 429 VRLAQ 443
VR+AQ
Sbjct: 773 VRIAQ 777
Score = 73.3 bits (172), Expect = 1e-13
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = +1
Query: 82 LSSVQAVATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
LS+ Q++A LG+A+IA+ E+ GAEM R FG L RY EP +RRAVPLA+ L S SNP
Sbjct: 657 LSATQSIAVLGIALIAMGEDIGAEMAYRSFGNLLRYCEPAIRRAVPLALGLISASNP 713
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +3
Query: 264 IDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNN 359
+ +++KY + +D+++ A+ A G+V G N
Sbjct: 422 LTMIDKYLYSTDDNIKSGALLACGIVNCGIRN 453
>AF132182-1|AAD34770.1| 919|Drosophila melanogaster unknown
protein.
Length = 919
Score = 84.6 bits (200), Expect = 5e-17
Identities = 39/65 (60%), Positives = 47/65 (72%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P L++ID L+K+SHDSD +VA+NAIFAMGLVGAGTNN YH K P +LFM
Sbjct: 713 PKLNIIDTLSKFSHDSDAEVAHNAIFAMGLVGAGTNNARLASMLRQLAQYHSKDPSNLFM 772
Query: 429 VRLAQ 443
VR+AQ
Sbjct: 773 VRIAQ 777
Score = 73.3 bits (172), Expect = 1e-13
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = +1
Query: 82 LSSVQAVATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
LS+ Q++A LG+A+IA+ E+ GAEM R FG L RY EP +RRAVPLA+ L S SNP
Sbjct: 657 LSATQSIAVLGIALIAMGEDIGAEMAYRSFGNLLRYCEPAIRRAVPLALGLISASNP 713
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +3
Query: 264 IDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNN 359
+ +++KY + +D+++ A+ A G+V G N
Sbjct: 422 LTMIDKYLYSTDDNIKSGALLACGIVNCGIRN 453
>AE014296-3245|AAF49095.2| 919|Drosophila melanogaster CG7762-PA
protein.
Length = 919
Score = 84.6 bits (200), Expect = 5e-17
Identities = 39/65 (60%), Positives = 47/65 (72%)
Frame = +3
Query: 249 PALSVIDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNNXXXXXXXXXXXXYHGKSPVHLFM 428
P L++ID L+K+SHDSD +VA+NAIFAMGLVGAGTNN YH K P +LFM
Sbjct: 713 PKLNIIDTLSKFSHDSDAEVAHNAIFAMGLVGAGTNNARLASMLRQLAQYHSKDPSNLFM 772
Query: 429 VRLAQ 443
VR+AQ
Sbjct: 773 VRIAQ 777
Score = 73.3 bits (172), Expect = 1e-13
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = +1
Query: 82 LSSVQAVATLGVAVIALAEETGAEMCTRIFGQLGRYGEPVVRRAVPLAIALCSVSNP 252
LS+ Q++A LG+A+IA+ E+ GAEM R FG L RY EP +RRAVPLA+ L S SNP
Sbjct: 657 LSATQSIAVLGIALIAMGEDIGAEMAYRSFGNLLRYCEPAIRRAVPLALGLISASNP 713
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +3
Query: 264 IDVLNKYSHDSDNDVAYNAIFAMGLVGAGTNN 359
+ +++KY + +D+++ A+ A G+V G N
Sbjct: 422 LTMIDKYLYSTDDNIKSGALLACGIVNCGIRN 453
>AY075312-1|AAL68179.1| 919|Drosophila melanogaster GH01967p
protein.
Length = 919
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 175 QLGRYGEPVVRRAVPLAIALCSVSNPHSPSS 267
Q R GE ++ VPL+ LC VS P S S
Sbjct: 456 QQSRPGERIIEVDVPLSYGLCHVSQPLSSGS 486
>AE013599-1036|AAF58836.2| 919|Drosophila melanogaster CG30011-PA,
isoform A protein.
Length = 919
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 175 QLGRYGEPVVRRAVPLAIALCSVSNPHSPSS 267
Q R GE ++ VPL+ LC VS P S S
Sbjct: 456 QQSRPGERIIEVDVPLSYGLCHVSQPLSSGS 486
>AE013599-1035|AAF58837.2| 932|Drosophila melanogaster CG30011-PC,
isoform C protein.
Length = 932
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 175 QLGRYGEPVVRRAVPLAIALCSVSNPHSPSS 267
Q R GE ++ VPL+ LC VS P S S
Sbjct: 469 QQSRPGERIIEVDVPLSYGLCHVSQPLSSGS 499
>AF051933-1|AAC73052.1| 1097|Drosophila melanogaster cyclin T
protein.
Length = 1097
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 246 GHRAQGDGERHGAPHYRLPVPTQLSEDAG 160
GHR++ HG PH+ +P S+ G
Sbjct: 561 GHRSKSGSTVHGMPHFEQQLPYSQSQSYG 589
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,337,697
Number of Sequences: 53049
Number of extensions: 261910
Number of successful extensions: 950
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1438687674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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