Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0215.Seq
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   0.77 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   4.1  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   5.4  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   5.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   5.4  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   7.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.5  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   9.5  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 541 SAPVERNSESFGASVLQQTSVLSSCS*IPWNNATGSD 651
           S P +R S S         SV++SCS +P   + GSD
Sbjct: 83  SLPTQRTSTS--NPTYSSRSVMTSCSSVPTTASYGSD 117


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +1

Query: 355 TRLAVTWRPMWTRSASRRPRFRNWACVHQ 441
           ++L  T+R  + R     P    W C++Q
Sbjct: 35  SKLLYTYRQPYPRQKKSHPPQWTWQCINQ 63


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = +3

Query: 351 SYQARGHLAADVDPLGITTATLPELGMRAPSSELIMRKY 467
           ++ ARG L    D L     +  + G R    +L+ R Y
Sbjct: 109 TFLARGTLIKSFDMLSHVDVSFIKAGFRLEYKQLLKRSY 147


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 502 NTLSMSASSKLKYFLMMSSELG 437
           N +SMS   KLK+ L +   LG
Sbjct: 71  NCVSMSNLKKLKFLLKLGQLLG 92


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = +3

Query: 351 SYQARGHLAADVDPLGITTATLPELGMRAPSSELIMRKY 467
           ++ ARG L    D L     +  + G R    +L+ R Y
Sbjct: 109 TFLARGTLIKSFDMLSHVDVSFIKAGFRLEYKQLLKRSY 147


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 388 TRSASRRPRFRNWAC 432
           T S+++RP+F N +C
Sbjct: 195 TCSSAKRPKFENSSC 209


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = +1

Query: 466 ISISMKPTWTGYSNSLNYVYRR 531
           +S  ++  W G+++S + +Y+R
Sbjct: 212 MSYDLRGNWAGFADSHSPLYKR 233


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 575 EQAYCNKHRY*VHVHK 622
           E  +CNK ++ V++HK
Sbjct: 223 ELTFCNKIKHLVNLHK 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,446
Number of Sequences: 336
Number of extensions: 3838
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)