Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0212.Seq
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    26   0.37 
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    25   0.85 
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   4.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   6.0  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   7.9  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.9  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -1

Query: 343 LFEFVEINSGVIAHYADSTDLVKSIKFGS 257
           L E+ +I   ++ HY  +TDL K I++ +
Sbjct: 120 LNEWTKIEINLLKHYQSTTDLHKKIRYSA 148


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 12/53 (22%), Positives = 22/53 (41%)
 Frame = +1

Query: 475 DQVEERIHSRVPRDRKSMSTYCTPLKPSRLGNGPKLFVREHPKVYSNVAHTLA 633
           D V  R+ S  P   +     CTP +  ++        + +PK ++ + H  A
Sbjct: 59  DPVGRRLKSLAPLVLRGSCPQCTPQEMKQIQKVLAFVQKNYPKEWNKILHQYA 111


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 69  TLGCTSVICSDKTGTLTTNQMSVS 140
           T  C+S   SDK  T TT+ ++V+
Sbjct: 44  TKDCSSPTPSDKLNTSTTSSVNVN 67


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 15/41 (36%), Positives = 15/41 (36%)
 Frame = +2

Query: 626 RSRRHQQGSSDHDPEEPHLGPDPPVRYWSRHAALLGLATAD 748
           R R H         EE    P P VR     AA  G A AD
Sbjct: 257 RRRHHLVHHKCGGEEEAERAPAPAVRAAGDAAAARGAARAD 297


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 650 SSDHDPEEPHLGPDPP 697
           +S HD   P  GP PP
Sbjct: 266 ASQHDLGSPSSGPAPP 281


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -3

Query: 527 IDFLSRGTRE*ILSSTWSQFLDARQ 453
           +++ SRG  +  L + W +F + +Q
Sbjct: 532 VEYCSRGDLQTYLRTAWDKFTNMQQ 556


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,604
Number of Sequences: 336
Number of extensions: 3285
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)