Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0209.Seq
(640 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 171 7e-43
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 171 7e-43
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 171 7e-43
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 171 7e-43
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 171 7e-43
BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p pro... 31 1.7
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA... 31 1.7
AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-P... 31 1.7
AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2 pr... 29 5.3
AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon prot... 29 5.3
AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB... 29 5.3
AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA... 29 5.3
AE013599-325|AAF59274.2| 1307|Drosophila melanogaster CG11101-PA... 29 5.3
M95811-1|AAD19752.1| 1788|Drosophila melanogaster laminin B1 cha... 28 9.3
M19525-1|AAA28663.1| 1788|Drosophila melanogaster protein ( D.me... 28 9.3
AE014134-1348|AAN10647.1| 1788|Drosophila melanogaster CG7123-PB... 28 9.3
AE014134-1347|AAF52563.1| 1788|Drosophila melanogaster CG7123-PA... 28 9.3
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 171 bits (416), Expect = 7e-43
Identities = 86/106 (81%), Positives = 89/106 (83%), Gaps = 1/106 (0%)
Frame = +1
Query: 202 KNRQTREHLLVFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 381
K + E L + EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 382 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGS-HT 516
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 91.5 bits (217), Expect = 9e-19
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 638
KPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVP+KLL MAG+
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPRKLLTMAGI 202
Score = 70.5 bits (165), Expect = 2e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKE
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKE 73
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 171 bits (416), Expect = 7e-43
Identities = 86/106 (81%), Positives = 89/106 (83%), Gaps = 1/106 (0%)
Frame = +1
Query: 202 KNRQTREHLLVFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 381
K + E L + EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 382 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGS-HT 516
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 92.7 bits (220), Expect = 4e-19
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 638
KPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG+
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGI 202
Score = 70.5 bits (165), Expect = 2e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKE
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKE 73
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 171 bits (416), Expect = 7e-43
Identities = 86/106 (81%), Positives = 89/106 (83%), Gaps = 1/106 (0%)
Frame = +1
Query: 202 KNRQTREHLLVFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 381
K + E L + EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 382 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGS-HT 516
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 92.7 bits (220), Expect = 4e-19
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 638
KPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG+
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGI 202
Score = 70.5 bits (165), Expect = 2e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKE
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKE 73
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 171 bits (416), Expect = 7e-43
Identities = 86/106 (81%), Positives = 89/106 (83%), Gaps = 1/106 (0%)
Frame = +1
Query: 202 KNRQTREHLLVFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 381
K + E L + EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 382 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGS-HT 516
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 92.7 bits (220), Expect = 4e-19
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 638
KPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG+
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGI 202
Score = 70.5 bits (165), Expect = 2e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKE
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKE 73
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 171 bits (416), Expect = 7e-43
Identities = 86/106 (81%), Positives = 89/106 (83%), Gaps = 1/106 (0%)
Frame = +1
Query: 202 KNRQTREHLLVFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 381
K + E L + EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 382 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGS-HT 516
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 92.7 bits (220), Expect = 4e-19
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +3
Query: 507 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 638
KPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG+
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGI 202
Score = 70.5 bits (165), Expect = 2e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +2
Query: 143 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 253
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKE
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKE 73
>BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p
protein.
Length = 823
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 149 LPCRAHDHGRDHDRVHEDRRGLYLHRVIRIRREN-RHVHRLEQRPPLLN 6
L C H D R+H ++GL + V+ + REN VH + ++ LLN
Sbjct: 359 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 407
>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
protein.
Length = 1958
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 149 LPCRAHDHGRDHDRVHEDRRGLYLHRVIRIRREN-RHVHRLEQRPPLLN 6
L C H D R+H ++GL + V+ + REN VH + ++ LLN
Sbjct: 325 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 373
>AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-PA
protein.
Length = 954
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 501 DRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMA 632
++ PH+V K G G + + L+P G G+++ + K+L + A
Sbjct: 904 EQLPHSVAAKRNGNAGKLAL-LLPGASGAGVINEDLEKQLRERA 946
>AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2
protein.
Length = 1711
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 416 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSEATHRP 523
RKSP + L+L+SC+ Q ++ T SEA P
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEPP 1071
>AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon protein.
Length = 1695
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 416 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSEATHRP 523
RKSP + L+L+SC+ Q ++ T SEA P
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEPP 1071
>AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB,
isoform B protein.
Length = 1695
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 416 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSEATHRP 523
RKSP + L+L+SC+ Q ++ T SEA P
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEPP 1071
>AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA,
isoform A protein.
Length = 1711
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 416 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSEATHRP 523
RKSP + L+L+SC+ Q ++ T SEA P
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEPP 1071
>AE013599-325|AAF59274.2| 1307|Drosophila melanogaster CG11101-PA
protein.
Length = 1307
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 160 VGSCHQTRPSCSRRKNRQTREHLLVFFTNQRIEII 264
V SCH RP SRRK+R+ ++ F R++ I
Sbjct: 816 VSSCH-CRPGYSRRKHREPCRRVISFHLGMRVDRI 849
>M95811-1|AAD19752.1| 1788|Drosophila melanogaster laminin B1 chain
protein.
Length = 1788
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +2
Query: 497 TRSEATHRPLQSHR--QVWFCNSPADSCPSWY 586
TR E H P ++HR Q+ + P + P+W+
Sbjct: 101 TREETKHDPYKNHRIGQIIYKTKPGTNIPTWW 132
>M19525-1|AAA28663.1| 1788|Drosophila melanogaster protein (
D.melanogaster lamininB1 subunit mRNA, complete cds. ).
Length = 1788
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +2
Query: 497 TRSEATHRPLQSHR--QVWFCNSPADSCPSWY 586
TR E H P ++HR Q+ + P + P+W+
Sbjct: 101 TREETKHDPYKNHRIGQIIYKTKPGTNIPTWW 132
>AE014134-1348|AAN10647.1| 1788|Drosophila melanogaster CG7123-PB,
isoform B protein.
Length = 1788
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +2
Query: 497 TRSEATHRPLQSHR--QVWFCNSPADSCPSWY 586
TR E H P ++HR Q+ + P + P+W+
Sbjct: 99 TREETKHDPYKNHRIGQIIYKTKPGTNIPTWW 130
>AE014134-1347|AAF52563.1| 1788|Drosophila melanogaster CG7123-PA,
isoform A protein.
Length = 1788
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +2
Query: 497 TRSEATHRPLQSHR--QVWFCNSPADSCPSWY 586
TR E H P ++HR Q+ + P + P+W+
Sbjct: 99 TREETKHDPYKNHRIGQIIYKTKPGTNIPTWW 130
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,605,703
Number of Sequences: 53049
Number of extensions: 674167
Number of successful extensions: 3091
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2594
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -