Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0208.Seq
         (726 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            28   0.26 
AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding prot...    27   0.59 
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    26   1.4  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    25   3.2  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   4.2  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   4.2  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    24   5.5  
AY193730-1|AAO62003.1|  441|Anopheles gambiae cytochrome P450 CY...    24   5.5  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    24   5.5  
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           23   9.6  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     23   9.6  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   9.6  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   9.6  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 28.3 bits (60), Expect = 0.26
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = +2

Query: 44   TAPTQEMEQPEGQKVQDGAPVQ-MSLPWGLTPADLHAIHRSAQHAIDQSRREQQMDNDMQ 220
            TA  Q+   P+G+     A  Q + LP   +      +HRS Q    Q +++QQ     Q
Sbjct: 1259 TAQHQDPRGPQGRSTDYHATQQPLPLPGLASEMQPQQLHRSQQQQQQQQQQQQQQQQQQQ 1318

Query: 221  E 223
            +
Sbjct: 1319 Q 1319


>AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding protein
           protein.
          Length = 108

 Score = 27.1 bits (57), Expect = 0.59
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +2

Query: 407 IRCWRAGNA*SAVLANVPRVCSRLYNIGSRSHSGL 511
           IR W  G A  +V      VCS  Y  GSR H G+
Sbjct: 57  IRGWDEGVAQMSVGQRAKLVCSPDYAYGSRGHPGV 91


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
 Frame = +2

Query: 2   QNEQQTIVHQFVP-QTAPTQEMEQPEGQKVQDGAPVQMSLPWGLTPADLHAIHRSAQHAI 178
           Q +QQ    ++VP Q    ++ +Q   Q+ Q     Q        P  L    +  QH  
Sbjct: 254 QQQQQQQGERYVPPQLRQQRQQQQRPRQQQQQQQQQQQQQGERYVPPQLRQQRQQQQHQQ 313

Query: 179 DQSRREQQMDNDMQE 223
            Q +++QQ     ++
Sbjct: 314 QQQQQQQQRQQQQRQ 328



 Score = 23.4 bits (48), Expect = 7.3
 Identities = 12/40 (30%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
 Frame = -1

Query: 201 CCSRRDWSIAC*A--ERCIACRSAGVKPHGRLICTGAPSC 88
           C     W+  C +  +R   C   GV  H   +CT  P C
Sbjct: 665 CLELGHWAHDCRSPDDRQNMCIRCGVVGHMAKVCTSQPKC 704


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = -3

Query: 475 SRADSRHICKHSASRVSRPPASNRRCELSEAAYNVASRQCRVVP 344
           + A  R  C+   +   RP A    C     +Y+VA    R++P
Sbjct: 799 AEATDRQWCQRMLASFQRPLAQRVVCGFRSISYSVAVLMPRLIP 842


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 188 VTGRLHAERSGVSHAGRPGSSPTGDSSAPGHRP 90
           V GRL A+ S   ++  P  +P  + + PG  P
Sbjct: 360 VIGRLPADNSSALNSPNPARAPPRNFTMPGPGP 392


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
 Frame = -2

Query: 164 RSGVSHAGRPGSS-PTGDSSAPGHRPAPSGP 75
           R    H G  G+S P G   APG    P  P
Sbjct: 56  RGLTGHRGEKGNSGPVGPPGAPGRDGMPGAP 86


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 575 FILKSICIECCYKCLRL*LGDGARCAIASR 486
           F+L  I +  CY C+ + L D AR    S+
Sbjct: 277 FVLPFIIMAFCYICVSIRLNDRARTKPGSK 306


>AY193730-1|AAO62003.1|  441|Anopheles gambiae cytochrome P450
           CYPm3r10 protein.
          Length = 441

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 143 LHAIHRSAQHAIDQSRREQQMDNDMQEVK 229
           +HAIHR  +H  D  R +       QE K
Sbjct: 340 VHAIHRDPEHFPDPERFDPDRFTAEQEAK 368


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 11/34 (32%), Positives = 12/34 (35%)
 Frame = -1

Query: 171 C*AERCIACRSAGVKPHGRLICTGAPSCTFWPSG 70
           C  +R   C   G K H    C   P C   P G
Sbjct: 445 CGPDRRDCCLRGGEKGHFAATCRLPPRCVLCPDG 478


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -1

Query: 156 CIACRSAGVKPHGRLICTGAPSCTFWPSGC 67
           C+ C++ G K H    C   P  T  P  C
Sbjct: 191 CMRCKATGTKAHTAKYCPLKPVIT--PEDC 218


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -1

Query: 156 CIACRSAGVKPHGRLICTGAPSCTFWPSGC 67
           C+ C++ G K H    C   P  T  P  C
Sbjct: 192 CMRCKATGTKAHTAKYCPLKPVIT--PEDC 219


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 2    QNEQQTIVHQFVPQTAPTQEMEQPEGQKVQ 91
            Q   QT+ HQ+  Q    Q+ +Q + Q+ Q
Sbjct: 1294 QQPLQTLQHQYQQQLQQQQQQQQQQQQQHQ 1323


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +2

Query: 62  MEQPEGQKVQDGAPVQMSLPWGLTPADLHAIHRSAQHAIDQSRREQQMD 208
           +E P G ++   A   + L  G TPA    +   A  A+D+  RE  ++
Sbjct: 661 VELPPGAELIGYADDLVLLAPGTTPAAAAVVAEEAVSAVDRWLREHHLE 709


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,301
Number of Sequences: 2352
Number of extensions: 15412
Number of successful extensions: 55
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)