Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0202.Seq
         (704 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    60   4e-08
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ...    44   0.003
UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep: ...    41   0.026
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    41   0.026
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;...    40   0.060
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    38   0.24 
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu...    33   5.2  
UniRef50_Q8S5Y5 Cluster: Putative uncharacterized protein OSJNBa...    33   6.8  
UniRef50_A6P228 Cluster: Putative uncharacterized protein; n=1; ...    33   9.0  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 60.5 bits (140), Expect = 4e-08
 Identities = 31/41 (75%), Positives = 33/41 (80%)
 Frame = +2

Query: 509 TRLALQLFLVKIFKVYSFRLRGLVRVPYRYFSSLPPRAGSG 631
           TRLALQ  LVK FKV SF+L+GL RV Y YFSSLPPR GSG
Sbjct: 63  TRLALQWILVKGFKVDSFQLQGLERVLYCYFSSLPPRVGSG 103


>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 76

 Score = 44.4 bits (100), Expect = 0.003
 Identities = 26/69 (37%), Positives = 36/69 (52%)
 Frame = +2

Query: 485 SWNYRGCWTRLALQLFLVKIFKVYSFRLRGLVRVPYRYFSSLPPRAGSG*FARLLPSLDV 664
           SWNYR CW +    L    +       +    R  + + S  PP+  SG  +RLL  +D+
Sbjct: 7   SWNYRSCWHQTGPLLGFGTVEN--RTPIHSTKRHQWNW-SLPPPKVSSGKVSRLLLPVDI 63

Query: 665 VAVSQAPSP 691
           VA+SQAPSP
Sbjct: 64  VAISQAPSP 72


>UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep:
           LRRG00114 - Rattus norvegicus (Rat)
          Length = 223

 Score = 41.1 bits (92), Expect = 0.026
 Identities = 19/20 (95%), Positives = 19/20 (95%)
 Frame = +2

Query: 644 LLPSLDVVAVSQAPSPESNP 703
           LLPSLDVVAVSQAPSPE NP
Sbjct: 167 LLPSLDVVAVSQAPSPELNP 186


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 41.1 bits (92), Expect = 0.026
 Identities = 17/27 (62%), Positives = 22/27 (81%)
 Frame = +2

Query: 68  LWRCFR*CSSCDDPRISPLTSQYECPQ 148
           L +CFR C S ++ RISPLTS+Y+CPQ
Sbjct: 258 LGKCFRSCLSPENLRISPLTSEYKCPQ 284


>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 493

 Score = 39.9 bits (89), Expect = 0.060
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = +1

Query: 574 PRKSPVSLFFVTTSPCREW 630
           PRKSPV LFFVTTSP REW
Sbjct: 24  PRKSPVLLFFVTTSPGREW 42


>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
          Predicted protein - Nematostella vectensis
          Length = 79

 Score = 37.9 bits (84), Expect = 0.24
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = -3

Query: 63 FHQSRTKVRGSKAIRYRPSSN 1
          F   RTKVRGSK IRYRPSSN
Sbjct: 6  FRCQRTKVRGSKTIRYRPSSN 26


>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
          lucimarinus CCE9901|Rep: Predicted protein -
          Ostreococcus lucimarinus CCE9901
          Length = 72

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 15/21 (71%), Positives = 15/21 (71%)
 Frame = -3

Query: 63 FHQSRTKVRGSKAIRYRPSSN 1
          FH  RTKV GSK IRY PS N
Sbjct: 6  FHCQRTKVGGSKMIRYHPSLN 26


>UniRef50_Q8S5Y5 Cluster: Putative uncharacterized protein
           OSJNBa0073L20.24; n=2; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBa0073L20.24 - Oryza sativa subsp. japonica (Rice)
          Length = 362

 Score = 33.1 bits (72), Expect = 6.8
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -3

Query: 84  RKHRQRCFHQSRTKVRGSKAIRYRPSS 4
           R+H  RC  Q  T +RG++ IR RPSS
Sbjct: 70  RRHTTRCGRQFGTNIRGAEKIRARPSS 96


>UniRef50_A6P228 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides capillosus ATCC 29799|Rep: Putative
           uncharacterized protein - Bacteroides capillosus ATCC
           29799
          Length = 157

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -1

Query: 305 VSRWADNFTLNKLECSKGLKMLLEYFVHGIIEYD 204
           +S+W  N TL  +  SKGL ML    +  +IEYD
Sbjct: 40  ISKWETNETLPDIRQSKGLAMLYNMTLDELIEYD 73


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,055,554
Number of Sequences: 1657284
Number of extensions: 13194391
Number of successful extensions: 31589
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 30653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31577
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)