Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0202.Seq
         (704 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.79 
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   4.2  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   4.2  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   7.4  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   9.8  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 458 RNNFSIRYWSWNYRGCW 508
           R+NF   +  WNY  CW
Sbjct: 746 RHNFKGLHLDWNYPVCW 762



 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/21 (33%), Positives = 8/21 (38%)
 Frame = +2

Query: 446  ELFNRNNFSIRYWSWNYRGCW 508
            +    NNF      W Y  CW
Sbjct: 1930 DFIETNNFDGLDLDWEYPKCW 1950


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -2

Query: 106 IVARRTSAKASPKVFSSIKNES 41
           I ARRT  K SP+V ++IK+ S
Sbjct: 336 IRARRTGRKVSPRV-NTIKHTS 356


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -2

Query: 106 IVARRTSAKASPKVFSSIKNES 41
           I ARRT  K SP+V ++IK+ S
Sbjct: 336 IRARRTGRKVSPRV-NTIKHTS 356


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -2

Query: 265 SAQRG*KCCLNIS 227
           S+Q+G K CLN+S
Sbjct: 32  SSQKGQKTCLNLS 44


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/44 (22%), Positives = 22/44 (50%)
 Frame = +2

Query: 287 CRPTSTLTLEHRDRILILNRRFLERRLTDDMLRKRVSITADACT 418
           C  T+ L L  + R +ILN++  +  + +   + + ++    CT
Sbjct: 181 CYLTTELVLMLQTRFVILNKQLTKITVKNFATKTQSAVLGKICT 224


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 513 DLPSNCSSLKYLKCTHSDYEA 575
           ++  N SSL+YL   ++D  A
Sbjct: 484 EVAGNISSLRYLNLDYNDLSA 504


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,745
Number of Sequences: 336
Number of extensions: 3296
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)