Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0202.Seq
         (704 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X80497-1|CAA56662.1| 1235|Homo sapiens phosphorylase kinase prot...    30   7.0  
D50487-1|BAA09078.1| 1220|Homo sapiens RNA helicase protein.           30   7.0  
D38616-1|BAA07606.1| 1235|Homo sapiens phosphorylase kinase alph...    30   7.0  
BC047327-1|AAH47327.2| 1220|Homo sapiens DEAH (Asp-Glu-Ala-His) ...    30   7.0  
BC044586-1|AAH44586.2| 1220|Homo sapiens DEAH (Asp-Glu-Ala-His) ...    30   7.0  
BC014036-1|AAH14036.1| 1235|Homo sapiens phosphorylase kinase, a...    30   7.0  
AL732509-6|CAI41680.1| 1235|Homo sapiens phosphorylase kinase, a...    30   7.0  
AL096700-4|CAB86408.2| 1235|Homo sapiens phosphorylase kinase, a...    30   7.0  
AF044572-1|AAD32846.1| 1235|Homo sapiens phosphorylase kinase al...    30   7.0  

>X80497-1|CAA56662.1| 1235|Homo sapiens phosphorylase kinase
           protein.
          Length = 1235

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 338 LNRRFLERRLTDDMLRKRVSITADACTDSAAHK 436
           LN+ +   R    +LRK+V + A+ACTD  +H+
Sbjct: 816 LNQEWGLIRYISGLLRKKVEVLAEACTDLLSHQ 848


>D50487-1|BAA09078.1| 1220|Homo sapiens RNA helicase protein.
          Length = 1220

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 93  EHQRKHRQRCFHQSRTKVRGSKAIRYRPSS 4
           +H+R+HR R   +SRT+ R     RYR  S
Sbjct: 197 DHKRRHRSRSRSRSRTRERNKVKSRYRSRS 226


>D38616-1|BAA07606.1| 1235|Homo sapiens phosphorylase kinase alpha
           subunit protein.
          Length = 1235

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 338 LNRRFLERRLTDDMLRKRVSITADACTDSAAHK 436
           LN+ +   R    +LRK+V + A+ACTD  +H+
Sbjct: 816 LNQEWGLIRYISGLLRKKVEVLAEACTDLLSHQ 848


>BC047327-1|AAH47327.2| 1220|Homo sapiens DEAH (Asp-Glu-Ala-His) box
           polypeptide 8 protein.
          Length = 1220

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 93  EHQRKHRQRCFHQSRTKVRGSKAIRYRPSS 4
           +H+R+HR R   +SRT+ R     RYR  S
Sbjct: 197 DHKRRHRSRSRSRSRTRERNKVKSRYRSRS 226


>BC044586-1|AAH44586.2| 1220|Homo sapiens DEAH (Asp-Glu-Ala-His) box
           polypeptide 8 protein.
          Length = 1220

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 93  EHQRKHRQRCFHQSRTKVRGSKAIRYRPSS 4
           +H+R+HR R   +SRT+ R     RYR  S
Sbjct: 197 DHKRRHRSRSRSRSRTRERNKVKSRYRSRS 226


>BC014036-1|AAH14036.1| 1235|Homo sapiens phosphorylase kinase,
           alpha 2 (liver) protein.
          Length = 1235

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 338 LNRRFLERRLTDDMLRKRVSITADACTDSAAHK 436
           LN+ +   R    +LRK+V + A+ACTD  +H+
Sbjct: 816 LNQEWGLIRYISGLLRKKVEVLAEACTDLLSHQ 848


>AL732509-6|CAI41680.1| 1235|Homo sapiens phosphorylase kinase,
           alpha 2 (liver) protein.
          Length = 1235

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 338 LNRRFLERRLTDDMLRKRVSITADACTDSAAHK 436
           LN+ +   R    +LRK+V + A+ACTD  +H+
Sbjct: 816 LNQEWGLIRYISGLLRKKVEVLAEACTDLLSHQ 848


>AL096700-4|CAB86408.2| 1235|Homo sapiens phosphorylase kinase,
           alpha 2 (liver) protein.
          Length = 1235

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 338 LNRRFLERRLTDDMLRKRVSITADACTDSAAHK 436
           LN+ +   R    +LRK+V + A+ACTD  +H+
Sbjct: 816 LNQEWGLIRYISGLLRKKVEVLAEACTDLLSHQ 848


>AF044572-1|AAD32846.1| 1235|Homo sapiens phosphorylase kinase alpha
           subunit protein.
          Length = 1235

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 338 LNRRFLERRLTDDMLRKRVSITADACTDSAAHK 436
           LN+ +   R    +LRK+V + A+ACTD  +H+
Sbjct: 816 LNQEWGLIRYISGLLRKKVEVLAEACTDLLSHQ 848


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,876,546
Number of Sequences: 237096
Number of extensions: 1976427
Number of successful extensions: 4593
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4593
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)