Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0201.Seq
         (668 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp. ...    66   7e-10
UniRef50_Q8GEF9 Cluster: Putative uncharacterized protein; n=1; ...    66   1e-09
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp...    33   6.2  
UniRef50_P62593 Cluster: Beta-lactamase TEM precursor; n=261; ro...    33   6.2  
UniRef50_UPI00015547F1 Cluster: PREDICTED: similar to IA-1; n=1;...    33   8.2  
UniRef50_A0D095 Cluster: Chromosome undetermined scaffold_33, wh...    33   8.2  

>UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp.
           SS|Rep: LacZ alpha peptide - Beggiatoa sp. SS
          Length = 73

 Score = 66.1 bits (154), Expect = 7e-10
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = -1

Query: 368 GFPRQALNRGLPLGFRFSALRHLDPKKLD 282
           GFPRQALNRGLPLGFRFSALRHLDPKKLD
Sbjct: 45  GFPRQALNRGLPLGFRFSALRHLDPKKLD 73



 Score = 38.3 bits (85), Expect = 0.17
 Identities = 17/18 (94%), Positives = 18/18 (100%)
 Frame = -2

Query: 496 DAPCSGALSAAGVVVTRT 443
           DAPCSGALSAAGVVVTR+
Sbjct: 2   DAPCSGALSAAGVVVTRS 19


>UniRef50_Q8GEF9 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 99

 Score = 65.7 bits (153), Expect = 1e-09
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = +1

Query: 508 SGKCARNPYLFIFLNTFKYVSAHETITLI 594
           SGKCARNPYLFIFLNTFKYVSAHETITLI
Sbjct: 27  SGKCARNPYLFIFLNTFKYVSAHETITLI 55



 Score = 62.5 bits (145), Expect = 9e-09
 Identities = 34/59 (57%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = +2

Query: 494 VRWHFRGNVRGTPICLFF*IHSNMYPLMRQ*-P**NASIILKKEEYEYSTFPCRPYSLF 667
           VRWHF G     P  LF  +++  Y    +     NASIILKKEEYEYSTFPCRPYSLF
Sbjct: 22  VRWHFSGKCARNPY-LFIFLNTFKYVSAHETITLINASIILKKEEYEYSTFPCRPYSLF 79


>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
           spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
           spumigena CCY 9414
          Length = 72

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 12/16 (75%), Positives = 16/16 (100%)
 Frame = +2

Query: 2   RPSQQLRTLNGEWQIV 49
           RPSQQLR+LNGEW+++
Sbjct: 57  RPSQQLRSLNGEWRLM 72


>UniRef50_P62593 Cluster: Beta-lactamase TEM precursor; n=261;
           root|Rep: Beta-lactamase TEM precursor - Escherichia
           coli
          Length = 286

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +3

Query: 627 MSIQHFRVALIPFF 668
           MSIQHFRVALIPFF
Sbjct: 1   MSIQHFRVALIPFF 14


>UniRef50_UPI00015547F1 Cluster: PREDICTED: similar to IA-1; n=1;
           Ornithorhynchus anatinus|Rep: PREDICTED: similar to IA-1
           - Ornithorhynchus anatinus
          Length = 225

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -3

Query: 441 ERYTCQRPSARSFRFLPFLSRHVRRLSPSSSKSGAPFRVPI 319
           ER  C R   +SF+  PFLSRHV    PS  +     +VP+
Sbjct: 170 ERRFCFRFPPKSFKSSPFLSRHVDSCHPSDGRRLLLLQVPM 210


>UniRef50_A0D095 Cluster: Chromosome undetermined scaffold_33, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_33,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1173

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -3

Query: 156 VYSFDL*GILPISAYWLKNELI*QKFNANFNKILTLTI 43
           +++F L G L    +WLKN+    KF++ F ++L L +
Sbjct: 665 IFNFSLQGALSYIDFWLKNQHFDDKFSSTFTQLLLLAL 702


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,976,839
Number of Sequences: 1657284
Number of extensions: 13232902
Number of successful extensions: 28119
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28110
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)