Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0200.Seq
         (769 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    25   3.4  
AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.         25   3.4  
AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.         25   3.4  
AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.         25   3.4  
AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.         25   3.4  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    25   3.4  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    25   3.4  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   4.5  
AY748845-1|AAV28191.1|  102|Anopheles gambiae cytochrome P450 pr...    23   7.9  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +2

Query: 161 QHQIFRSNVWLTELESDLRLK 223
           ++QI +SNVWL  + SD +L+
Sbjct: 69  KNQIMKSNVWLRLVWSDYQLQ 89


>AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +2

Query: 482 CVHVNNSRHIANTGPPPTCSMRIISRSGDQVSSAEIGENL 601
           CV V N +HI N  P  +  +R IS    +   AE+   L
Sbjct: 129 CVRVGNRQHIVN--PVKSARIRTISSFNFKYGRAEVRAKL 166


>AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +2

Query: 482 CVHVNNSRHIANTGPPPTCSMRIISRSGDQVSSAEIGENL 601
           CV V N +HI N  P  +  +R IS    +   AE+   L
Sbjct: 129 CVRVGNRQHIVN--PVKSARIRTISSFNFKYGRAEVRAKL 166


>AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +2

Query: 482 CVHVNNSRHIANTGPPPTCSMRIISRSGDQVSSAEIGENL 601
           CV V N +HI N  P  +  +R IS    +   AE+   L
Sbjct: 129 CVRVGNRQHIVN--PVKSARIRTISSFNFKYGRAEVRAKL 166


>AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +2

Query: 482 CVHVNNSRHIANTGPPPTCSMRIISRSGDQVSSAEIGENL 601
           CV V N +HI N  P  +  +R IS    +   AE+   L
Sbjct: 129 CVRVGNRQHIVN--PVKSARIRTISSFNFKYGRAEVRAKL 166


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +2

Query: 482 CVHVNNSRHIANTGPPPTCSMRIISRSGDQVSSAEIGENL 601
           CV V N +HI N  P  +  +R IS    +   AE+   L
Sbjct: 147 CVRVGNRQHIVN--PVKSARIRTISSFNFKYGRAEVRAKL 184


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +2

Query: 482 CVHVNNSRHIANTGPPPTCSMRIISRSGDQVSSAEIGENL 601
           CV V N +HI N  P  +  +R IS    +   AE+   L
Sbjct: 147 CVRVGNRQHIVN--PVKSARIRTISSFNFKYGRAEVRAKL 184


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 14/43 (32%), Positives = 16/43 (37%)
 Frame = +1

Query: 43  INATCDAVGHRSHCTCIAGYTGNPRIQCNATTTMYRTDFPTPD 171
           + A C   GH S CT      G     C     M+ TD P  D
Sbjct: 278 VGARCKCNGHASECTTSTALDGQRTRVCKC---MHFTDGPDCD 317


>AY748845-1|AAV28191.1|  102|Anopheles gambiae cytochrome P450
           protein.
          Length = 102

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 532 YLLHENNFTFWRPSQFRRNR 591
           Y+LH N   F  P QFR  R
Sbjct: 14  YMLHHNPEYFPEPDQFRPER 33


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 841,248
Number of Sequences: 2352
Number of extensions: 17813
Number of successful extensions: 111
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 111
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)