Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0197.Seq
(674 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 28 0.061
DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc gr... 24 1.3
DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc gr... 23 3.0
AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory recept... 22 5.3
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.0
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.0
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.0
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.0
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.0
AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory recept... 21 9.2
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 28.3 bits (60), Expect = 0.061
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 612 RNNFSIRYWSWNYRGCWHQTC 550
R+NF + WNY CW C
Sbjct: 746 RHNFKGLHLDWNYPVCWQSNC 766
Score = 23.8 bits (49), Expect = 1.3
Identities = 8/26 (30%), Positives = 10/26 (38%)
Frame = -3
Query: 627 LELFNRNNFSIRYWSWNYRGCWHQTC 550
++ NNF W Y CW C
Sbjct: 1929 VDFIETNNFDGLDLDWEYPKCWQVDC 1954
Score = 22.2 bits (45), Expect = 4.0
Identities = 8/26 (30%), Positives = 10/26 (38%)
Frame = -3
Query: 627 LELFNRNNFSIRYWSWNYRGCWHQTC 550
L+ + NF W Y CW C
Sbjct: 1504 LQFLEKWNFDGLDLDWEYPKCWQVDC 1529
>DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc
growth factor 2 protein.
Length = 439
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +3
Query: 408 TSKEGSRRANYPLPAREVVTKNNDTGL 488
T + A+YP P E+V + ND +
Sbjct: 250 TPARNPKEADYPSPLYELVDRRNDENI 276
>DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc
growth factor 4 protein.
Length = 431
Score = 22.6 bits (46), Expect = 3.0
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 408 TSKEGSRRANYPLPAREVVTKNND 479
T K + A+YP P E++ + D
Sbjct: 242 TPKRNPKEADYPAPLYELIDRKYD 265
>AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory receptor
candidate 33 protein.
Length = 321
Score = 21.8 bits (44), Expect = 5.3
Identities = 5/16 (31%), Positives = 9/16 (56%)
Frame = -3
Query: 603 FSIRYWSWNYRGCWHQ 556
+++ YW Y WH+
Sbjct: 117 YAVYYWRQQYEDFWHR 132
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.4 bits (43), Expect = 7.0
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +2
Query: 2 LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 112
+YAC + + V+ +RR + +++VP +L+S
Sbjct: 190 VYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.4 bits (43), Expect = 7.0
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +2
Query: 2 LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 112
+YAC + + V+ +RR + +++VP +L+S
Sbjct: 190 VYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.4 bits (43), Expect = 7.0
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +2
Query: 2 LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 112
+YAC + + V+ +RR + +++VP +L+S
Sbjct: 190 VYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.4 bits (43), Expect = 7.0
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +2
Query: 2 LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 112
+YAC + + V+ +RR + +++VP +L+S
Sbjct: 190 VYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.4 bits (43), Expect = 7.0
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +2
Query: 2 LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 112
+YAC + + V+ +RR + +++VP +L+S
Sbjct: 190 VYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory receptor
candidate 31 protein.
Length = 250
Score = 21.0 bits (42), Expect = 9.2
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = -2
Query: 280 VLDHAICKSIQIH 242
V+D ++CK+I +H
Sbjct: 80 VIDFSLCKAILVH 92
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,585
Number of Sequences: 336
Number of extensions: 3201
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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