Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0196.Seq
         (728 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM182453-1|CAJ65691.1|  168|Anopheles gambiae globin 1 protein.        25   3.2  
AM182452-1|CAJ65690.1|  168|Anopheles gambiae globin 1 protein.        25   3.2  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    23   9.7  

>AM182453-1|CAJ65691.1|  168|Anopheles gambiae globin 1 protein.
          Length = 168

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 666 FEHYPQALDYLD 631
           FE YPQ LDY D
Sbjct: 57  FEEYPQYLDYFD 68


>AM182452-1|CAJ65690.1|  168|Anopheles gambiae globin 1 protein.
          Length = 168

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 666 FEHYPQALDYLD 631
           FE YPQ LDY D
Sbjct: 57  FEEYPQYLDYFD 68


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 404 TAPPTAPHSAQNHVRTCDISST 469
           + PPT P ++ +  R+ D+S T
Sbjct: 166 STPPTIPSASPSPTRSTDLSQT 187


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,090
Number of Sequences: 2352
Number of extensions: 10836
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)