Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0191.Seq
         (775 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    25   0.51 
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   4.7  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   4.7  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.3  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 13/55 (23%), Positives = 27/55 (49%)
 Frame = +3

Query: 204 RTTNICYVLEINNRYIVTGTPISVTYLRLYNPGKRFYLKKYCDLRKFSFKIFLNI 368
           R  ++C++L+    YI+  + ++  Y  ++   + FYL K   L    + I L +
Sbjct: 273 RLCHLCFLLDEKLSYIILTSFLNNFYFIIFQVFESFYLHKATTLETVYYFISLGL 327


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -3

Query: 641 MEYKVNNSFF*FTNHGPKVRLPALIIVDSYLVSTFFIDI 525
           ++Y VN   F   ++ PKV L    ++ +YL+    +D+
Sbjct: 298 IKYSVNKLIF--RSNDPKVTLELCGMISTYLIIMIQLDL 334


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 9/53 (16%)
 Frame = +1

Query: 97  TCFFSLANELIPKMSFNIF-----AKP----FLLT*HINLLTWRFEQQISVMF 228
           T FF++   L   M F+IF     +KP    FL     NLL W F+Q ++V +
Sbjct: 218 TVFFTVPRVL---MYFDIFITEHESKPNWLFFLANFLTNLLFWEFDQIVNVAY 267


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 688 VNY*PLFNAGFEPYSL 735
           +NY P  + GF PY +
Sbjct: 330 LNYVPHISTGFSPYEI 345


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,527
Number of Sequences: 336
Number of extensions: 3489
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)